Composite table

Thermodesulfobacteriota


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 19.36 Ser AGA 0 TCT 5.98 Tyr ATA 0 TAT 13.00 Cys ACA 0 TGT 4.02 T
GAA 0 TTC 21.76 GGA 0 TCC 16.65 GTA 0 TAC 14.83 GCA 0 TGC 9.14 C
Leu TAA 0 TTA 5.52 TGA 0 TCA 5.99 ochre TTA 0 TAA 1.06 opal Sec TCA 0 TGA 1.23 A
CAA 0 TTG 12.09 CGA 0 TCG 9.14 amber CTA 0 TAG 0.80 Trp CCA 0 TGG 11.20 G
C Leu AAG 0 CTT 17.70 Pro AGG 0 CCT 7.31 His ATG 0 CAT 9.86 Arg ACG 0 CGT 8.18 T
GAG 0 CTC 22.08 GGG 0 CCC 17.48 GTG 0 CAC 11.03 GCG 0 CGC 21.15 C
TAG 0 CTA 2.66 TGG 0 CCA 4.40 Gln TTG 0 CAA 8.87 TCG 0 CGA 4.20 A
CAG 0 CTG 43.70 CGG 0 CCG 17.17 CTG 0 CAG 24.69 CCG 0 CGG 15.17 G
A Ile AAT 0 ATT 18.34 Thr AGT 0 ACT 5.88 Asn ATT 0 AAT 13.60 Ser ACT 0 AGT 5.55 T
GAT 0 ATC 33.14 GGT 0 ACC 27.24 GTT 0 AAC 19.58 GCT 0 AGC 14.02 C
TAT 0 ATA 8.52 TGT 0 ACA 7.56 Lys TTT 0 AAA 23.72 Arg TCT 0 AGA 5.30 A
Met CAT 0 ATG 25.60 CGT 0 ACG 10.94 CTT 0 AAG 26.15 CCT 0 AGG 6.90 G
G Val AAC 0 GTT 13.87 Ala AGC 0 GCT 12.10 Asp ATC 0 GAT 24.15 Gly ACC 0 GGT 13.18 T
GAC 1 GTC 21.92 GGC 0 GCC 47.52 GTC 0 GAC 29.59 GCC 0 GGC 34.69 C
TAC 0 GTA 7.50 TGC 0 GCA 13.48 Glu TTC 0 GAA 34.24 TCC 0 GGA 13.28 A
CAC 0 GTG 27.56 CGC 0 GCG 20.58 CTC 0 GAG 30.08 CCC 0 GGG 16.80 G



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