Composite table

Thermodesulfobacteriota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 20.08 Ser AGA 0 TCT 6.39 Tyr ATA 0 TAT 13.59 Cys ACA 0 TGT 4.21 T
GAA 78 TTC 21.26 GGA 76 TCC 16.15 GTA 80 TAC 14.26 GCA 77 TGC 8.98 C
Leu TAA 71 TTA 6.32 TGA 73 TCA 6.32 ochre TTA 0 TAA 1.07 opal Sec TCA 69 TGA 1.25 A
CAA 71 TTG 12.56 CGA 59 TCG 9.01 amber CTA 0 TAG 0.79 Trp CCA 79 TGG 11.19 G
C Leu AAG 0 CTT 18.18 Pro AGG 0 CCT 7.72 His ATG 0 CAT 10.18 Arg ACG 93 CGT 8.21 T
GAG 88 CTC 21.38 GGG 78 CCC 17.11 GTG 77 CAC 10.59 GCG 0 CGC 20.45 C
TAG 71 CTA 2.91 TGG 73 CCA 4.70 Gln TTG 80 CAA 9.46 TCG 26 CGA 4.32 A
CAG 89 CTG 42.91 CGG 68 CCG 16.83 CTG 67 CAG 24.16 CCG 70 CGG 15.11 G
A Ile AAT 0 ATT 19.10 Thr AGT 0 ACT 6.35 Asn ATT 0 AAT 14.35 Ser ACT 0 AGT 5.76 T
GAT 180 ATC 32.44 GGT 86 ACC 26.09 GTT 83 AAC 18.99 GCT 71 AGC 13.69 C
TAT 0 ATA 9.08 TGT 72 ACA 7.93 Lys TTT 81 AAA 24.81 Arg TCT 71 AGA 5.70 A
Met CAT 247 ATG 25.42 CGT 75 ACG 10.82 CTT 61 AAG 25.66 CCT 71 AGG 7.06 G
G Val AAC 0 GTT 14.34 Ala AGC 0 GCT 12.60 Asp ATC 0 GAT 24.69 Gly ACC 0 GGT 13.34 T
GAC 72 GTC 21.83 GGC 89 GCC 46.71 GTC 119 GAC 28.97 GCC 129 GGC 34.27 C
TAC 83 GTA 7.81 TGC 175 GCA 13.71 Glu TTC 129 GAA 35.08 TCC 73 GGA 13.90 A
CAC 63 GTG 26.50 CGC 54 GCG 19.98 CTC 40 GAG 29.22 CCC 66 GGG 16.17 G



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