Composite table

Thermomicrobiota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 4.32 Ser AGA 0 TCT 1.65 Tyr ATA 0 TAT 5.65 Cys ACA 0 TGT 1.56 T
GAA 2 TTC 27.66 GGA 2 TCC 9.94 GTA 3 TAC 18.84 GCA 2 TGC 5.78 C
Leu TAA 2 TTA 1.00 TGA 2 TCA 2.70 ochre TTA 0 TAA 0.50 opal Sec TCA 2 TGA 1.72 A
CAA 2 TTG 9.57 CGA 2 TCG 14.12 amber CTA 0 TAG 1.15 Trp CCA 2 TGG 15.10 G
C Leu AAG 0 CTT 6.33 Pro AGG 0 CCT 3.55 His ATG 0 CAT 5.52 Arg ACG 0 CGT 8.41 T
GAG 2 CTC 41.12 GGG 2 CCC 15.58 GTG 2 CAC 15.44 GCG 2 CGC 36.00 C
TAG 2 CTA 2.33 TGG 2 CCA 5.96 Gln TTG 2 CAA 5.37 TCG 2 CGA 7.16 A
CAG 2 CTG 46.43 CGG 2 CCG 34.53 CTG 2 CAG 27.67 CCG 2 CGG 29.09 G
A Ile AAT 0 ATT 5.79 Thr AGT 0 ACT 3.13 Asn ATT 0 AAT 4.43 Ser ACT 0 AGT 3.53 T
GAT 2 ATC 43.75 GGT 2 ACC 27.34 GTT 2 AAC 16.68 GCT 2 AGC 15.73 C
TAT 0 ATA 1.07 TGT 2 ACA 3.65 Lys TTT 1 AAA 2.87 Arg TCT 2 AGA 0.97 A
Met CAT 7 ATG 18.63 CGT 2 ACG 21.19 CTT 1 AAG 15.42 CCT 2 AGG 2.00 G
G Val AAC 0 GTT 7.15 Ala AGC 0 GCT 10.08 Asp ATC 0 GAT 18.18 Gly ACC 0 GGT 12.71 T
GAC 2 GTC 40.72 GGC 2 GCC 48.34 GTC 3 GAC 36.17 GCC 2 GGC 39.20 C
TAC 2 GTA 3.68 TGC 2 GCA 11.05 Glu TTC 2 GAA 14.90 TCC 2 GGA 9.56 A
CAC 2 GTG 32.25 CGC 2 GCG 47.26 CTC 3 GAG 48.36 CCC 2 GGG 22.44 G



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