Composite table

dsRNAviruses


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 8.17 Ser AGA 0 TCT 9.42 Tyr ATA 0 TAT 8.17 Cys ACA 0 TGT 5.65 T
GAA 0 TTC 23.24 GGA 0 TCC 18.84 GTA 0 TAC 20.73 GCA 0 TGC 10.05 C
Leu TAA 0 TTA 6.91 TGA 0 TCA 8.79 ochre TTA 0 TAA 0.63 opal Sec TCA 0 TGA 0.63 A
CAA 0 TTG 13.19 CGA 0 TCG 16.33 amber CTA 0 TAG 0.00 Trp CCA 0 TGG 15.08 G
C Leu AAG 0 CTT 8.79 Pro AGG 0 CCT 8.79 His ATG 0 CAT 8.17 Arg ACG 0 CGT 15.70 T
GAG 0 CTC 30.78 GGG 0 CCC 30.78 GTG 0 CAC 21.98 GCG 0 CGC 21.98 C
TAG 0 CTA 10.05 TGG 0 CCA 9.42 Gln TTG 0 CAA 10.05 TCG 0 CGA 10.05 A
CAG 0 CTG 15.08 CGG 0 CCG 24.50 CTG 0 CAG 18.84 CCG 0 CGG 15.08 G
A Ile AAT 0 ATT 3.14 Thr AGT 0 ACT 15.70 Asn ATT 0 AAT 8.79 Ser ACT 0 AGT 11.31 T
GAT 0 ATC 25.75 GGT 0 ACC 19.47 GTT 0 AAC 19.47 GCT 0 AGC 18.22 C
TAT 0 ATA 10.05 TGT 0 ACA 6.91 Lys TTT 0 AAA 9.42 Arg TCT 0 AGA 3.77 A
Met CAT 0 ATG 23.24 CGT 0 ACG 19.47 CTT 0 AAG 15.08 CCT 0 AGG 6.91 G
G Val AAC 0 GTT 13.82 Ala AGC 0 GCT 20.10 Asp ATC 0 GAT 14.45 Gly ACC 0 GGT 18.84 T
GAC 0 GTC 27.01 GGC 0 GCC 40.83 GTC 0 GAC 33.29 GCC 0 GGC 30.78 C
TAC 0 GTA 11.93 TGC 0 GCA 20.73 Glu TTC 0 GAA 14.45 TCC 0 GGA 7.54 A
CAC 0 GTG 18.22 CGC 0 GCG 31.41 CTC 0 GAG 25.75 CCC 0 GGG 28.27 G



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