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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170545439
CXSB01000566
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
27
102
+
Thr
TGT
[ENA]
¢þ
>WENV170545436
CXSB01000240
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
36
121
+
Leu
CAG
[ENA]
¢þ
>WENV170545437
CXSB01000240
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
132
207
+
Thr
TGT
[ENA]
¢þ
>WENV170545438
CXSB01000510
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
232
147
-
Leu
CAG
[ENA]
¢þ
>WENV170545435
CXSB01000131
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
418
343
-
Trp
CCA
[ENA]
¢þ
>WENV170545434
CXSB01000131
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
506
422
-
Leu
TAG
[ENA]
¢þ
>WENV170545433
CXSB01000131
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
590
514
-
Cys
GCA
[ENA]
¢þ
>WENV170545432
CXSB01000131
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
676
601
-
Gln
TTG
[ENA]
¢þ
>WENV170545431
CXSB01000131
[CXSB] human gut metagenome genome assembly hG3, contig hG3_contig000681.; ENVO:feces
759
684
-
Phe
GAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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