This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OCLA] human gut metagenome; human gut
HIT:
156 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180561988
OCLA01000004
[OCLA] human gut metagenome; human gut
1
74
+
Pro
TGG
[ENA]
¡û
>WENV180562121
OCLA01003601
[OCLA] human gut metagenome; human gut
3
77
+
Gly
GCC
[ENA]
¡û
>WENV180562122
OCLA01003730
[OCLA] human gut metagenome; human gut
3
78
+
Ala
TGC
[ENA]
¡û
>WENV180562123
OCLA01003753
[OCLA] human gut metagenome; human gut
5
79
+
Val
TAC
[ENA]
¡û
>WENV180562081
OCLA01000364
[OCLA] human gut metagenome; human gut
52
125
+
Gly
TCC
[ENA]
¡û
>WENV180562116
OCLA01003023
[OCLA] human gut metagenome; human gut
56
132
+
Met
CAT
[ENA]
¡û
>WENV180561969
OCLA01000001
[OCLA] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¡û
>WENV180562118
OCLA01003457
[OCLA] human gut metagenome; human gut
71
144
+
Trp
CCA
[ENA]
¡û
>WENV180562102
OCLA01001015
[OCLA] human gut metagenome; human gut
75
2
-
Arg
ACG
[ENA]
¡û
>WENV180562120
OCLA01003572
[OCLA] human gut metagenome; human gut
76
2
-
Phe
GAA
[ENA]
¡û
>WENV180562106
OCLA01001705
[OCLA] human gut metagenome; human gut
76
151
+
Met
CAT
[ENA]
¡û
>WENV180562124
OCLA01003758
[OCLA] human gut metagenome; human gut
77
2
-
Thr
TGT
[ENA]
¡û
>WENV180562082
OCLA01000364
[OCLA] human gut metagenome; human gut
131
207
+
Arg
TCT
[ENA]
¡û
>WENV180562071
OCLA01000184
[OCLA] human gut metagenome; human gut
132
58
-
Asn
GTT
[ENA]
¡û
>WENV180562111
OCLA01002106
[OCLA] human gut metagenome; human gut
136
62
-
Gly
GCC
[ENA]
¡û
>WENV180562053
OCLA01000067
[OCLA] human gut metagenome; human gut
137
64
-
Gly
TCC
[ENA]
¡û
>WENV180562109
OCLA01001809
[OCLA] human gut metagenome; human gut
138
65
-
Ile2
CAT
[ENA]
¡û
>WENV180562119
OCLA01003491
[OCLA] human gut metagenome; human gut
139
56
-
Leu
TAG
[ENA]
¡û
>WENV180562079
OCLA01000326
[OCLA] human gut metagenome; human gut
141
68
-
fMet
CAT
[ENA]
¡û
>WENV180562104
OCLA01001282
[OCLA] human gut metagenome; human gut
141
214
+
Cys
GCA
[ENA]
¡û
>WENV180562045
OCLA01000025
[OCLA] human gut metagenome; human gut
144
219
+
Lys
CTT
[ENA]
¡û
>WENV180562054
OCLA01000068
[OCLA] human gut metagenome; human gut
147
72
-
Val
TAC
[ENA]
¡û
>WENV180562074
OCLA01000198
[OCLA] human gut metagenome; human gut
153
61
-
Ser
TGA
[ENA]
¡û
>WENV180562114
OCLA01002312
[OCLA] human gut metagenome; human gut
158
82
-
Arg
ACG
[ENA]
¡û
>WENV180562115
OCLA01002430
[OCLA] human gut metagenome; human gut
161
71
-
Ser
GGA
[ENA]
¡û
>WENV180562107
OCLA01001705
[OCLA] human gut metagenome; human gut
170
245
+
Ile2
CAT
[ENA]
¡û
>WENV180562101
OCLA01001015
[OCLA] human gut metagenome; human gut
175
90
-
Leu
TAA
[ENA]
¡û
>WENV180561970
OCLA01000001
[OCLA] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¡û
>WENV180562112
OCLA01002148
[OCLA] human gut metagenome; human gut
207
119
-
Ser
TGA
[ENA]
¡û
>WENV180562117
OCLA01003030
[OCLA] human gut metagenome; human gut
211
128
-
Leu
CAA
[ENA]
¡û
>WENV180562110
OCLA01002106
[OCLA] human gut metagenome; human gut
222
140
-
Leu
TAG
[ENA]
¡û
>WENV180562083
OCLA01000364
[OCLA] human gut metagenome; human gut
222
297
+
Gln
TTG
[ENA]
¡û
>WENV180562108
OCLA01001809
[OCLA] human gut metagenome; human gut
240
166
-
Met
CAT
[ENA]
¡û
>WENV180562052
OCLA01000067
[OCLA] human gut metagenome; human gut
241
159
-
Leu
GAG
[ENA]
¡û
>WENV180562113
OCLA01002312
[OCLA] human gut metagenome; human gut
259
171
-
Leu
TAA
[ENA]
¡û
>WENV180562100
OCLA01001015
[OCLA] human gut metagenome; human gut
262
191
-
Gly
GCC
[ENA]
¡û
>WENV180561971
OCLA01000001
[OCLA] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¡û
>WENV180562105
OCLA01001282
[OCLA] human gut metagenome; human gut
269
344
+
Arg
TCT
[ENA]
¡û
>WENV180562070
OCLA01000182
[OCLA] human gut metagenome; human gut
293
376
+
Leu
CAA
[ENA]
¡û
>WENV180562084
OCLA01000364
[OCLA] human gut metagenome; human gut
310
385
+
Lys
TTT
[ENA]
¡û
>WENV180562099
OCLA01001015
[OCLA] human gut metagenome; human gut
342
267
-
Thr
TGT
[ENA]
¡û
>WENV180561972
OCLA01000001
[OCLA] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¡û
>WENV180562103
OCLA01001192
[OCLA] human gut metagenome; human gut
363
275
-
Ser
GGA
[ENA]
¡û
>WENV180562098
OCLA01001015
[OCLA] human gut metagenome; human gut
431
348
-
Leu
TAG
[ENA]
¡û
>WENV180561973
OCLA01000001
[OCLA] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¡û
>WENV180562097
OCLA01001015
[OCLA] human gut metagenome; human gut
520
446
-
Lys
TTT
[ENA]
¡û
>WENV180561974
OCLA01000001
[OCLA] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¡û
>WENV180562095
OCLA01000637
[OCLA] human gut metagenome; human gut
580
494
-
Leu
GAG
[ENA]
¡û
>WENV180562069
OCLA01000163
[OCLA] human gut metagenome; human gut
588
663
+
Trp
CCA
[ENA]
¡û
>WENV180561975
OCLA01000001
[OCLA] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¡û
>WENV180562094
OCLA01000637
[OCLA] human gut metagenome; human gut
699
623
-
Arg
ACG
[ENA]
¡û
>WENV180561976
OCLA01000001
[OCLA] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¡û
>WENV180562093
OCLA01000637
[OCLA] human gut metagenome; human gut
781
707
-
Gly
GCC
[ENA]
¡û
>WENV180562092
OCLA01000637
[OCLA] human gut metagenome; human gut
890
805
-
Tyr
GTA
[ENA]
¡û
>WENV180562091
OCLA01000637
[OCLA] human gut metagenome; human gut
989
914
-
Thr
TGT
[ENA]
¡û
>WENV180562090
OCLA01000637
[OCLA] human gut metagenome; human gut
1103
1027
-
Asp
GTC
[ENA]
¡û
>WENV180562089
OCLA01000637
[OCLA] human gut metagenome; human gut
1185
1110
-
Val
TAC
[ENA]
¡û
>WENV180562088
OCLA01000637
[OCLA] human gut metagenome; human gut
1264
1190
-
Glu
TTC
[ENA]
¡û
>WENV180562087
OCLA01000637
[OCLA] human gut metagenome; human gut
1356
1280
-
fMet
CAT
[ENA]
¡û
>WENV180562096
OCLA01000649
[OCLA] human gut metagenome; human gut
1420
1493
+
fMet
CAT
[ENA]
¡û
>WENV180562086
OCLA01000637
[OCLA] human gut metagenome; human gut
1468
1380
-
Leu
TAA
[ENA]
¡û
>WENV180562022
OCLA01000010
[OCLA] human gut metagenome; human gut
1484
1410
-
Lys
CTT
[ENA]
¡û
>WENV180562085
OCLA01000637
[OCLA] human gut metagenome; human gut
1555
1481
-
Asn
GTT
[ENA]
¡û
>WENV180562072
OCLA01000185
[OCLA] human gut metagenome; human gut
1850
1776
-
Lys
CTT
[ENA]
¡û
>WENV180562055
OCLA01000069
[OCLA] human gut metagenome; human gut
1879
1955
+
Pro
TGG
[ENA]
¡û
>WENV180562033
OCLA01000012
[OCLA] human gut metagenome; human gut
2779
2705
-
Lys
TTT
[ENA]
¡û
>WENV180561985
OCLA01000003
[OCLA] human gut metagenome; human gut
2917
2992
+
Asn
GTT
[ENA]
¡û
>WENV180562077
OCLA01000241
[OCLA] human gut metagenome; human gut
3034
2948
-
Leu
CAA
[ENA]
¡û
>WENV180562076
OCLA01000241
[OCLA] human gut metagenome; human gut
3145
3069
-
His
GTG
[ENA]
¡û
>WENV180562060
OCLA01000080
[OCLA] human gut metagenome; human gut
3235
3161
-
Leu
TAA
[ENA]
¡û
>WENV180562066
OCLA01000113
[OCLA] human gut metagenome; human gut
3345
3428
+
Leu
TAG
[ENA]
¡û
>WENV180562078
OCLA01000246
[OCLA] human gut metagenome; human gut
3676
3604
-
Arg
CCG
[ENA]
¡û
>WENV180562075
OCLA01000224
[OCLA] human gut metagenome; human gut
3885
3811
-
Arg
TCT
[ENA]
¡û
>WENV180562080
OCLA01000350
[OCLA] human gut metagenome; human gut
3927
4002
+
Arg
TCT
[ENA]
¡û
>WENV180562029
OCLA01000012
[OCLA] human gut metagenome; human gut
5081
5154
+
Glu
TTC
[ENA]
¡û
>WENV180562030
OCLA01000012
[OCLA] human gut metagenome; human gut
5516
5590
+
Asp
GTC
[ENA]
¡û
>WENV180562031
OCLA01000012
[OCLA] human gut metagenome; human gut
5650
5727
+
Phe
GAA
[ENA]
¡û
>WENV180562051
OCLA01000055
[OCLA] human gut metagenome; human gut
6199
6126
-
Thr
CGT
[ENA]
¡û
>WENV180562043
OCLA01000024
[OCLA] human gut metagenome; human gut
8149
8224
+
Thr
CGT
[ENA]
¡û
>WENV180562049
OCLA01000036
[OCLA] human gut metagenome; human gut
8757
8685
-
Asp
GTC
[ENA]
¡û
>WENV180562048
OCLA01000036
[OCLA] human gut metagenome; human gut
8839
8765
-
Glu
TTC
[ENA]
¡û
>WENV180562073
OCLA01000191
[OCLA] human gut metagenome; human gut
9110
9039
-
Arg
CCG
[ENA]
¡û
>WENV180562061
OCLA01000082
[OCLA] human gut metagenome; human gut
10352
10260
-
Ser
TGA
[ENA]
¡û
>WENV180562068
OCLA01000142
[OCLA] human gut metagenome; human gut
10950
10860
-
Ser
GCT
[ENA]
¡û
>WENV180562067
OCLA01000142
[OCLA] human gut metagenome; human gut
11026
10952
-
Asn
GTT
[ENA]
¡û
>WENV180562050
OCLA01000040
[OCLA] human gut metagenome; human gut
12781
12708
-
Cys
GCA
[ENA]
¡û
>WENV180562035
OCLA01000017
[OCLA] human gut metagenome; human gut
13140
13221
+
Tyr
GTA
[ENA]
¡û
>WENV180562036
OCLA01000017
[OCLA] human gut metagenome; human gut
13426
13499
+
Thr
GGT
[ENA]
¡û
>WENV180562037
OCLA01000017
[OCLA] human gut metagenome; human gut
13562
13636
+
Met
CAT
[ENA]
¡û
>WENV180561995
OCLA01000006
[OCLA] human gut metagenome; human gut
13599
13684
+
Ser
GGA
[ENA]
¡û
>WENV180562065
OCLA01000087
[OCLA] human gut metagenome; human gut
14290
14216
-
Val
GAC
[ENA]
¡û
>WENV180562064
OCLA01000087
[OCLA] human gut metagenome; human gut
14362
14291
-
Cys
GCA
[ENA]
¡û
>WENV180562063
OCLA01000087
[OCLA] human gut metagenome; human gut
14463
14390
-
Gly
GCC
[ENA]
¡û
>WENV180562062
OCLA01000087
[OCLA] human gut metagenome; human gut
14961
15035
+
Val
CAC
[ENA]
¡û
>WENV180562002
OCLA01000007
[OCLA] human gut metagenome; human gut
17540
17465
-
His
GTG
[ENA]
¡û
>WENV180562038
OCLA01000017
[OCLA] human gut metagenome; human gut
18753
18826
+
Trp
CCA
[ENA]
¡û
>WENV180562046
OCLA01000025
[OCLA] human gut metagenome; human gut
18755
18838
+
Leu
TAG
[ENA]
¡û
>WENV180561998
OCLA01000007
[OCLA] human gut metagenome; human gut
19623
19698
+
Arg
TCT
[ENA]
¡û
>WENV180562056
OCLA01000077
[OCLA] human gut metagenome; human gut
21725
21816
+
Ser
GCT
[ENA]
¡û
>WENV180562057
OCLA01000077
[OCLA] human gut metagenome; human gut
21824
21900
+
Ile2
CAT
[ENA]
¡û
>WENV180562058
OCLA01000077
[OCLA] human gut metagenome; human gut
21908
21983
+
Phe
GAA
[ENA]
¡û
>WENV180562059
OCLA01000080
[OCLA] human gut metagenome; human gut
23270
23191
-
Gln
TTG
[ENA]
¡û
>WENV180562044
OCLA01000024
[OCLA] human gut metagenome; human gut
29624
29548
-
Arg
CCT
[ENA]
¡û
>WENV180561989
OCLA01000005
[OCLA] human gut metagenome; human gut
35130
35202
+
Gln
CTG
[ENA]
¡û
>WENV180561990
OCLA01000005
[OCLA] human gut metagenome; human gut
35338
35413
+
Glu
CTC
[ENA]
¡û
>WENV180561986
OCLA01000003
[OCLA] human gut metagenome; human gut
37201
37290
+
Ser
CGA
[ENA]
¡û
>WENV180561994
OCLA01000005
[OCLA] human gut metagenome; human gut
45462
45387
-
Val
TAC
[ENA]
¡û
>WENV180562047
OCLA01000025
[OCLA] human gut metagenome; human gut
45701
45612
-
Ser
GGA
[ENA]
¡û
>WENV180561999
OCLA01000007
[OCLA] human gut metagenome; human gut
55248
55322
+
Pro
TGG
[ENA]
¡û
>WENV180562000
OCLA01000007
[OCLA] human gut metagenome; human gut
56177
56248
+
Gly
TCC
[ENA]
¡û
>WENV180562023
OCLA01000011
[OCLA] human gut metagenome; human gut
61303
61388
+
Ser
TGA
[ENA]
¡û
>WENV180562042
OCLA01000021
[OCLA] human gut metagenome; human gut
68701
68628
-
Lys
TTT
[ENA]
¡û
>WENV180562041
OCLA01000021
[OCLA] human gut metagenome; human gut
68779
68705
-
Gln
TTG
[ENA]
¡û
>WENV180562040
OCLA01000021
[OCLA] human gut metagenome; human gut
68872
68789
-
Tyr
GTA
[ENA]
¡û
>WENV180562039
OCLA01000021
[OCLA] human gut metagenome; human gut
68977
68902
-
Val
TAC
[ENA]
¡û
>WENV180562024
OCLA01000011
[OCLA] human gut metagenome; human gut
68978
69068
+
Ser
GCT
[ENA]
¡û
>WENV180562025
OCLA01000011
[OCLA] human gut metagenome; human gut
69277
69350
+
Arg
ACG
[ENA]
¡û
>WENV180562006
OCLA01000008
[OCLA] human gut metagenome; human gut
70766
70682
-
Leu
CAA
[ENA]
¡û
>WENV180562026
OCLA01000011
[OCLA] human gut metagenome; human gut
80337
80423
+
Ser
CGA
[ENA]
¡û
>WENV180561981
OCLA01000002
[OCLA] human gut metagenome; human gut
81335
81410
+
Ile2
CAT
[ENA]
¡û
>WENV180562034
OCLA01000013
[OCLA] human gut metagenome; human gut
104070
103996
-
Ile2
CAT
[ENA]
¡û
>WENV180561993
OCLA01000005
[OCLA] human gut metagenome; human gut
110476
110400
-
fMet
CAT
[ENA]
¡û
>WENV180562032
OCLA01000012
[OCLA] human gut metagenome; human gut
116824
116895
+
Gly
CCC
[ENA]
¡û
>WENV180562021
OCLA01000010
[OCLA] human gut metagenome; human gut
120806
120733
-
Ile2
CAT
[ENA]
¡û
>WENV180562028
OCLA01000011
[OCLA] human gut metagenome; human gut
124723
124647
-
Pro
CGG
[ENA]
¡û
>WENV180562005
OCLA01000008
[OCLA] human gut metagenome; human gut
132451
132378
-
Ala
GGC
[ENA]
¡û
>WENV180562004
OCLA01000008
[OCLA] human gut metagenome; human gut
132596
132521
-
Ala
GGC
[ENA]
¡û
>WENV180561996
OCLA01000006
[OCLA] human gut metagenome; human gut
133560
133633
+
Ala
TGC
[ENA]
¡û
>WENV180561992
OCLA01000005
[OCLA] human gut metagenome; human gut
134596
134523
-
Arg
CCG
[ENA]
¡û
>WENV180562007
OCLA01000009
[OCLA] human gut metagenome; human gut
167701
167776
+
Thr
TGT
[ENA]
¡û
>WENV180562027
OCLA01000011
[OCLA] human gut metagenome; human gut
173201
173118
-
Leu
CAG
[ENA]
¡û
>WENV180561991
OCLA01000005
[OCLA] human gut metagenome; human gut
183343
183269
-
Pro
GGG
[ENA]
¡û
>WENV180562009
OCLA01000009
[OCLA] human gut metagenome; human gut
191831
191757
-
Arg
CCT
[ENA]
¡û
>WENV180562020
OCLA01000010
[OCLA] human gut metagenome; human gut
193183
193110
-
Glu
TTC
[ENA]
¡û
>WENV180562019
OCLA01000010
[OCLA] human gut metagenome; human gut
193286
193197
-
Ser
GCT
[ENA]
¡û
>WENV180562018
OCLA01000010
[OCLA] human gut metagenome; human gut
193369
193296
-
Ile
GAT
[ENA]
¡û
>WENV180562017
OCLA01000010
[OCLA] human gut metagenome; human gut
193453
193383
-
Gly
TCC
[ENA]
¡û
>WENV180562016
OCLA01000010
[OCLA] human gut metagenome; human gut
193541
193464
-
Phe
GAA
[ENA]
¡û
>WENV180562015
OCLA01000010
[OCLA] human gut metagenome; human gut
193620
193545
-
Asp
GTC
[ENA]
¡û
>WENV180562014
OCLA01000010
[OCLA] human gut metagenome; human gut
193742
193667
-
fMet
CAT
[ENA]
¡û
>WENV180562013
OCLA01000010
[OCLA] human gut metagenome; human gut
193864
193775
-
Ser
TGA
[ENA]
¡û
>WENV180562012
OCLA01000010
[OCLA] human gut metagenome; human gut
193949
193876
-
Glu
TTC
[ENA]
¡û
>WENV180562011
OCLA01000010
[OCLA] human gut metagenome; human gut
194036
193963
-
Ile
GAT
[ENA]
¡û
>WENV180562010
OCLA01000010
[OCLA] human gut metagenome; human gut
194120
194050
-
Gly
TCC
[ENA]
¡û
>WENV180562008
OCLA01000009
[OCLA] human gut metagenome; human gut
202733
202807
+
Ala
CGC
[ENA]
¡û
>WENV180562003
OCLA01000008
[OCLA] human gut metagenome; human gut
230018
230091
+
Asn
GTT
[ENA]
¡û
>WENV180561997
OCLA01000006
[OCLA] human gut metagenome; human gut
239497
239421
-
Ile
GAT
[ENA]
¡û
>WENV180562001
OCLA01000007
[OCLA] human gut metagenome; human gut
248103
248017
-
Leu
GAG
[ENA]
¡û
>WENV180561977
OCLA01000001
[OCLA] human gut metagenome; human gut
254037
254123
+
Leu
GAG
[ENA]
¡û
>WENV180561978
OCLA01000001
[OCLA] human gut metagenome; human gut
265370
265452
+
Tyr
GTA
[ENA]
¡û
>WENV180561979
OCLA01000001
[OCLA] human gut metagenome; human gut
265460
265533
+
Gln
TTG
[ENA]
¡û
>WENV180561987
OCLA01000003
[OCLA] human gut metagenome; human gut
275882
275954
+
Thr
CGT
[ENA]
¡û
>WENV180561984
OCLA01000002
[OCLA] human gut metagenome; human gut
304514
304441
-
Arg
CCG
[ENA]
¡û
>WENV180561983
OCLA01000002
[OCLA] human gut metagenome; human gut
496292
496217
-
Arg
TCT
[ENA]
¡û
>WENV180561982
OCLA01000002
[OCLA] human gut metagenome; human gut
547049
547124
+
Arg
CCT
[ENA]
¡û
>WENV180561980
OCLA01000001
[OCLA] human gut metagenome; human gut
888598
888670
+
Thr
GGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK