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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
[OGHG] metagenome; Human gut stool
HIT:
163 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181523213
OGHG01001902
[OGHG] metagenome; Human gut stool
47
120
+
Phe
GAA
[ENA]
¡û
>WENV181523261
OGHG01007892
[OGHG] metagenome; Human gut stool
49
124
+
Thr
GGT
[ENA]
¡û
>WENV181523227
OGHG01003536
[OGHG] metagenome; Human gut stool
75
1
-
Ile
GAT
[ENA]
¡û
>WENV181523273
OGHG01008673
[OGHG] metagenome; Human gut stool
80
153
+
Arg
ACG
[ENA]
¡û
>WENV181523148
OGHG01000059
[OGHG] metagenome; Human gut stool
87
2
-
Ser
TGA
[ENA]
¡û
>WENV181523271
OGHG01008402
[OGHG] metagenome; Human gut stool
91
163
+
Thr
CGT
[ENA]
¡û
>WENV181523272
OGHG01008405
[OGHG] metagenome; Human gut stool
93
168
+
His
GTG
[ENA]
¡û
>WENV181523292
OGHG01013086
[OGHG] metagenome; Human gut stool
96
168
+
Lys
CTT
[ENA]
¡û
>WENV181523194
OGHG01000810
[OGHG] metagenome; Human gut stool
101
175
+
Ala
TGC
[ENA]
¡û
>WENV181523277
OGHG01008801
[OGHG] metagenome; Human gut stool
117
41
-
Arg
TCT
[ENA]
¡û
>WENV181523291
OGHG01012821
[OGHG] metagenome; Human gut stool
121
204
+
Leu
CAG
[ENA]
¡û
>WENV181523274
OGHG01008673
[OGHG] metagenome; Human gut stool
159
234
+
Pro
TGG
[ENA]
¡û
>WENV181523268
OGHG01007918
[OGHG] metagenome; Human gut stool
165
91
-
Lys
TTT
[ENA]
¡û
>WENV181523255
OGHG01007032
[OGHG] metagenome; Human gut stool
186
112
-
Asp
GTC
[ENA]
¡û
>WENV181523284
OGHG01009612
[OGHG] metagenome; Human gut stool
195
277
+
Leu
TAG
[ENA]
¡û
>WENV181523220
OGHG01002561
[OGHG] metagenome; Human gut stool
200
273
+
Lys
TTT
[ENA]
¡û
>WENV181523259
OGHG01007749
[OGHG] metagenome; Human gut stool
204
129
-
Val
GAC
[ENA]
¡û
>WENV181523207
OGHG01001253
[OGHG] metagenome; Human gut stool
234
306
+
Arg
CCT
[ENA]
¡û
>WENV181523283
OGHG01009296
[OGHG] metagenome; Human gut stool
256
181
-
Val
TAC
[ENA]
¡û
>WENV181523228
OGHG01003582
[OGHG] metagenome; Human gut stool
261
334
+
Gly
CCC
[ENA]
¡û
>WENV181523267
OGHG01007918
[OGHG] metagenome; Human gut stool
265
193
-
Phe
GAA
[ENA]
¡û
>WENV181523193
OGHG01000777
[OGHG] metagenome; Human gut stool
278
194
-
Leu
CAA
[ENA]
¡û
>WENV181523286
OGHG01010616
[OGHG] metagenome; Human gut stool
285
212
-
Arg
CCG
[ENA]
¡û
>WENV181523276
OGHG01008801
[OGHG] metagenome; Human gut stool
296
223
-
Gly
TCC
[ENA]
¡û
>WENV181523288
OGHG01010720
[OGHG] metagenome; Human gut stool
303
377
+
Glu
CTC
[ENA]
¡û
>WENV181523245
OGHG01005923
[OGHG] metagenome; Human gut stool
309
234
-
Arg
TCT
[ENA]
¡û
>WENV181523214
OGHG01001975
[OGHG] metagenome; Human gut stool
315
387
+
Asn
GTT
[ENA]
¡û
>WENV181523294
OGHG01013269
[OGHG] metagenome; Human gut stool
316
241
-
Val
CAC
[ENA]
¡û
>WENV181523218
OGHG01002364
[OGHG] metagenome; Human gut stool
321
394
+
Gly
GCC
[ENA]
¡û
>WENV181523282
OGHG01009296
[OGHG] metagenome; Human gut stool
336
262
-
Glu
TTC
[ENA]
¡û
>WENV181523266
OGHG01007918
[OGHG] metagenome; Human gut stool
343
269
-
fMet
CAT
[ENA]
¡û
>WENV181523240
OGHG01005000
[OGHG] metagenome; Human gut stool
345
418
+
Ala
TGC
[ENA]
¡û
>WENV181523287
OGHG01010704
[OGHG] metagenome; Human gut stool
356
270
-
Leu
TAA
[ENA]
¡û
>WENV181523208
OGHG01001530
[OGHG] metagenome; Human gut stool
359
433
+
Ile2
CAT
[ENA]
¡û
>WENV181523239
OGHG01004848
[OGHG] metagenome; Human gut stool
363
291
-
Arg
CCG
[ENA]
¡û
>WENV181523246
OGHG01006051
[OGHG] metagenome; Human gut stool
381
465
+
Leu
CAA
[ENA]
¡û
>WENV181523289
OGHG01010720
[OGHG] metagenome; Human gut stool
382
457
+
Lys
CTT
[ENA]
¡û
>WENV181523275
OGHG01008801
[OGHG] metagenome; Human gut stool
385
309
-
Pro
TGG
[ENA]
¡û
>WENV181523293
OGHG01013269
[OGHG] metagenome; Human gut stool
409
328
-
Leu
TAG
[ENA]
¡û
>WENV181523225
OGHG01003478
[OGHG] metagenome; Human gut stool
412
485
+
Lys
CTT
[ENA]
¡û
>WENV181523281
OGHG01009296
[OGHG] metagenome; Human gut stool
421
346
-
Asn
GTT
[ENA]
¡û
>WENV181523215
OGHG01001975
[OGHG] metagenome; Human gut stool
430
501
+
Glu
TTC
[ENA]
¡û
>WENV181523290
OGHG01010889
[OGHG] metagenome; Human gut stool
470
546
+
His
GTG
[ENA]
¡û
>WENV181523265
OGHG01007918
[OGHG] metagenome; Human gut stool
482
399
-
Tyr
GTA
[ENA]
¡û
>WENV181523295
OGHG01013589
[OGHG] metagenome; Human gut stool
486
402
-
Leu
CAA
[ENA]
¡û
>WENV181523137
OGHG01000006
[OGHG] metagenome; Human gut stool
491
562
+
Gln
TTG
[ENA]
¡û
>WENV181523280
OGHG01009296
[OGHG] metagenome; Human gut stool
501
427
-
Gly
GCC
[ENA]
¡û
>WENV181523262
OGHG01007893
[OGHG] metagenome; Human gut stool
508
435
-
Arg
ACG
[ENA]
¡û
>WENV181523216
OGHG01001975
[OGHG] metagenome; Human gut stool
516
587
+
Cys
GCA
[ENA]
¡û
>WENV181523258
OGHG01007560
[OGHG] metagenome; Human gut stool
523
594
+
Gly
GCC
[ENA]
¡û
>WENV181523253
OGHG01006809
[OGHG] metagenome; Human gut stool
539
628
+
Ser
GCT
[ENA]
¡û
>WENV181523254
OGHG01006849
[OGHG] metagenome; Human gut stool
579
666
+
Ser
CGA
[ENA]
¡û
>WENV181523279
OGHG01009153
[OGHG] metagenome; Human gut stool
588
674
+
Ser
CGA
[ENA]
¡û
>WENV181523190
OGHG01000600
[OGHG] metagenome; Human gut stool
592
506
-
Ser
TGA
[ENA]
¡û
>WENV181523156
OGHG01000079
[OGHG] metagenome; Human gut stool
592
666
+
Gly
CCC
[ENA]
¡û
>WENV181523285
OGHG01010531
[OGHG] metagenome; Human gut stool
593
514
-
Leu
CAA
[ENA]
¡û
>WENV181523202
OGHG01001105
[OGHG] metagenome; Human gut stool
601
674
+
Asn
GTT
[ENA]
¡û
>WENV181523278
OGHG01009123
[OGHG] metagenome; Human gut stool
610
681
+
Thr
GGT
[ENA]
¡û
>WENV181523264
OGHG01007918
[OGHG] metagenome; Human gut stool
614
543
-
Thr
TGT
[ENA]
¡û
>WENV181523224
OGHG01003195
[OGHG] metagenome; Human gut stool
616
701
+
Leu
AAG
[ENA]
¡û
>WENV181523250
OGHG01006586
[OGHG] metagenome; Human gut stool
623
698
+
Lys
CTT
[ENA]
¡û
>WENV181523256
OGHG01007167
[OGHG] metagenome; Human gut stool
629
721
+
Ser
CGA
[ENA]
¡û
>WENV181523270
OGHG01008318
[OGHG] metagenome; Human gut stool
635
720
+
Leu
AAG
[ENA]
¡û
>WENV181523236
OGHG01004438
[OGHG] metagenome; Human gut stool
636
563
-
Gln
CTG
[ENA]
¡û
>WENV181523223
OGHG01003105
[OGHG] metagenome; Human gut stool
669
743
+
Pro
CGG
[ENA]
¡û
>WENV181523269
OGHG01008275
[OGHG] metagenome; Human gut stool
691
765
+
Ala
GGC
[ENA]
¡û
>WENV181523263
OGHG01007918
[OGHG] metagenome; Human gut stool
696
621
-
Val
TAC
[ENA]
¡û
>WENV181523201
OGHG01001025
[OGHG] metagenome; Human gut stool
730
657
-
fMet
CAT
[ENA]
¡û
>WENV181523252
OGHG01006764
[OGHG] metagenome; Human gut stool
748
822
+
Asn
GTT
[ENA]
¡û
>WENV181523251
OGHG01006586
[OGHG] metagenome; Human gut stool
749
823
+
Glu
CTC
[ENA]
¡û
>WENV181523257
OGHG01007167
[OGHG] metagenome; Human gut stool
756
849
+
Ser
GCT
[ENA]
¡û
>WENV181523221
OGHG01002646
[OGHG] metagenome; Human gut stool
765
694
-
Gln
CTG
[ENA]
¡û
>WENV181523260
OGHG01007816
[OGHG] metagenome; Human gut stool
769
678
-
Ser
GGA
[ENA]
¡û
>WENV181523249
OGHG01006186
[OGHG] metagenome; Human gut stool
775
702
-
Gln
TTG
[ENA]
¡û
>WENV181523238
OGHG01004832
[OGHG] metagenome; Human gut stool
778
852
+
Glu
CTC
[ENA]
¡û
>WENV181523237
OGHG01004793
[OGHG] metagenome; Human gut stool
780
708
-
Arg
CCG
[ENA]
¡û
>WENV181523244
OGHG01005637
[OGHG] metagenome; Human gut stool
806
730
-
Ile
GAT
[ENA]
¡û
>WENV181523229
OGHG01003673
[OGHG] metagenome; Human gut stool
808
736
-
Thr
CGT
[ENA]
¡û
>WENV181523234
OGHG01004375
[OGHG] metagenome; Human gut stool
843
914
+
Trp
CCA
[ENA]
¡û
>WENV181523230
OGHG01003820
[OGHG] metagenome; Human gut stool
851
779
-
Glu
TTC
[ENA]
¡û
>WENV181523248
OGHG01006186
[OGHG] metagenome; Human gut stool
867
793
-
His
GTG
[ENA]
¡û
>WENV181523242
OGHG01005503
[OGHG] metagenome; Human gut stool
875
961
+
Ser
TGA
[ENA]
¡û
>WENV181523188
OGHG01000529
[OGHG] metagenome; Human gut stool
895
821
-
Gly
CCC
[ENA]
¡û
>WENV181523243
OGHG01005637
[OGHG] metagenome; Human gut stool
906
831
-
Ala
TGC
[ENA]
¡û
>WENV181523233
OGHG01004204
[OGHG] metagenome; Human gut stool
910
836
-
Val
TAC
[ENA]
¡û
>WENV181523226
OGHG01003513
[OGHG] metagenome; Human gut stool
926
999
+
fMet
CAT
[ENA]
¡û
>WENV181523211
OGHG01001827
[OGHG] metagenome; Human gut stool
941
868
-
Trp
CCA
[ENA]
¡û
>WENV181523247
OGHG01006186
[OGHG] metagenome; Human gut stool
949
877
-
Trp
CCA
[ENA]
¡û
>WENV181523241
OGHG01005090
[OGHG] metagenome; Human gut stool
957
884
-
Trp
CCA
[ENA]
¡û
>WENV181523232
OGHG01004204
[OGHG] metagenome; Human gut stool
1005
930
-
Asp
GTC
[ENA]
¡û
>WENV181523231
OGHG01004204
[OGHG] metagenome; Human gut stool
1093
1020
-
Met
CAT
[ENA]
¡û
>WENV181523212
OGHG01001861
[OGHG] metagenome; Human gut stool
1094
1165
+
Gly
TCC
[ENA]
¡û
>WENV181523235
OGHG01004399
[OGHG] metagenome; Human gut stool
1177
1251
+
Val
GAC
[ENA]
¡û
>WENV181523206
OGHG01001195
[OGHG] metagenome; Human gut stool
1254
1325
+
Gln
CTG
[ENA]
¡û
>WENV181523203
OGHG01001105
[OGHG] metagenome; Human gut stool
1277
1359
+
Tyr
GTA
[ENA]
¡û
>WENV181523204
OGHG01001105
[OGHG] metagenome; Human gut stool
1411
1485
+
Ala
TGC
[ENA]
¡û
>WENV181523219
OGHG01002465
[OGHG] metagenome; Human gut stool
1511
1437
-
Ala
GGC
[ENA]
¡û
>WENV181523222
OGHG01002760
[OGHG] metagenome; Human gut stool
1526
1452
-
His
GTG
[ENA]
¡û
>WENV181523217
OGHG01002139
[OGHG] metagenome; Human gut stool
1691
1617
-
Thr
CGT
[ENA]
¡û
>WENV181523183
OGHG01000340
[OGHG] metagenome; Human gut stool
1841
1767
-
Thr
TGT
[ENA]
¡û
>WENV181523171
OGHG01000217
[OGHG] metagenome; Human gut stool
1850
1778
-
Glu
TTC
[ENA]
¡û
>WENV181523205
OGHG01001105
[OGHG] metagenome; Human gut stool
1891
1962
+
Gln
TTG
[ENA]
¡û
>WENV181523191
OGHG01000674
[OGHG] metagenome; Human gut stool
1947
2029
+
Leu
TAG
[ENA]
¡û
>WENV181523210
OGHG01001577
[OGHG] metagenome; Human gut stool
2051
1968
-
Leu
CAG
[ENA]
¡û
>WENV181523169
OGHG01000180
[OGHG] metagenome; Human gut stool
2103
2030
-
Pro
CGG
[ENA]
¡û
>WENV181523168
OGHG01000180
[OGHG] metagenome; Human gut stool
2193
2120
-
Phe
GAA
[ENA]
¡û
>WENV181523209
OGHG01001577
[OGHG] metagenome; Human gut stool
2255
2340
+
Leu
AAG
[ENA]
¡û
>WENV181523177
OGHG01000311
[OGHG] metagenome; Human gut stool
2503
2577
+
Asp
GTC
[ENA]
¡û
>WENV181523143
OGHG01000037
[OGHG] metagenome; Human gut stool
2646
2573
-
Pro
CGG
[ENA]
¡û
>WENV181523142
OGHG01000037
[OGHG] metagenome; Human gut stool
2736
2663
-
Phe
GAA
[ENA]
¡û
>WENV181523160
OGHG01000115
[OGHG] metagenome; Human gut stool
3289
3363
+
Asn
GTT
[ENA]
¡û
>WENV181523195
OGHG01000810
[OGHG] metagenome; Human gut stool
3425
3497
+
Val
TAC
[ENA]
¡û
>WENV181523196
OGHG01000810
[OGHG] metagenome; Human gut stool
3500
3572
+
Asp
GTC
[ENA]
¡û
>WENV181523197
OGHG01000810
[OGHG] metagenome; Human gut stool
3592
3664
+
Lys
TTT
[ENA]
¡û
>WENV181523198
OGHG01000810
[OGHG] metagenome; Human gut stool
3669
3752
+
Leu
TAG
[ENA]
¡û
>WENV181523199
OGHG01000810
[OGHG] metagenome; Human gut stool
3764
3836
+
Thr
TGT
[ENA]
¡û
>WENV181523178
OGHG01000317
[OGHG] metagenome; Human gut stool
3792
3718
-
Pro
CGG
[ENA]
¡û
>WENV181523186
OGHG01000516
[OGHG] metagenome; Human gut stool
3804
3731
-
Lys
CTT
[ENA]
¡û
>WENV181523200
OGHG01000810
[OGHG] metagenome; Human gut stool
3843
3914
+
Gly
GCC
[ENA]
¡û
>WENV181523192
OGHG01000710
[OGHG] metagenome; Human gut stool
3856
3784
-
Thr
AGT
[ENA]
¡û
>WENV181523187
OGHG01000527
[OGHG] metagenome; Human gut stool
3949
4024
+
Pro
GGG
[ENA]
¡û
>WENV181523163
OGHG01000140
[OGHG] metagenome; Human gut stool
4458
4546
+
Ser
GGA
[ENA]
¡û
>WENV181523175
OGHG01000298
[OGHG] metagenome; Human gut stool
4474
4555
+
Leu
TAG
[ENA]
¡û
>WENV181523189
OGHG01000559
[OGHG] metagenome; Human gut stool
4577
4492
-
Ser
TGA
[ENA]
¡û
>WENV181523184
OGHG01000357
[OGHG] metagenome; Human gut stool
5553
5478
-
Val
TAC
[ENA]
¡û
>WENV181523145
OGHG01000053
[OGHG] metagenome; Human gut stool
5634
5559
-
Val
TAC
[ENA]
¡û
>WENV181523159
OGHG01000098
[OGHG] metagenome; Human gut stool
5768
5843
+
Lys
TTT
[ENA]
¡û
>WENV181523185
OGHG01000452
[OGHG] metagenome; Human gut stool
5778
5694
-
Leu
CAA
[ENA]
¡û
>WENV181523174
OGHG01000291
[OGHG] metagenome; Human gut stool
6391
6464
+
Trp
CCA
[ENA]
¡û
>WENV181523182
OGHG01000333
[OGHG] metagenome; Human gut stool
6412
6340
-
Glu
CTC
[ENA]
¡û
>WENV181523181
OGHG01000333
[OGHG] metagenome; Human gut stool
6500
6427
-
Lys
CTT
[ENA]
¡û
>WENV181523173
OGHG01000270
[OGHG] metagenome; Human gut stool
6553
6479
-
His
GTG
[ENA]
¡û
>WENV181523180
OGHG01000333
[OGHG] metagenome; Human gut stool
6587
6515
-
Glu
CTC
[ENA]
¡û
>WENV181523179
OGHG01000333
[OGHG] metagenome; Human gut stool
6729
6642
-
Ser
GCT
[ENA]
¡û
>WENV181523172
OGHG01000234
[OGHG] metagenome; Human gut stool
6749
6675
-
Asp
GTC
[ENA]
¡û
>WENV181523167
OGHG01000165
[OGHG] metagenome; Human gut stool
7406
7479
+
Thr
CGT
[ENA]
¡û
>WENV181523170
OGHG01000209
[OGHG] metagenome; Human gut stool
7443
7525
+
Leu
TAG
[ENA]
¡û
>WENV181523176
OGHG01000302
[OGHG] metagenome; Human gut stool
8020
8092
+
Cys
GCA
[ENA]
¡û
>WENV181523157
OGHG01000094
[OGHG] metagenome; Human gut stool
8288
8215
-
Lys
TTT
[ENA]
¡û
>WENV181523154
OGHG01000072
[OGHG] metagenome; Human gut stool
11298
11371
+
fMet
CAT
[ENA]
¡û
>WENV181523138
OGHG01000016
[OGHG] metagenome; Human gut stool
11858
11932
+
Arg
TCT
[ENA]
¡û
>WENV181523153
OGHG01000070
[OGHG] metagenome; Human gut stool
11887
11814
-
Lys
CTT
[ENA]
¡û
>WENV181523161
OGHG01000125
[OGHG] metagenome; Human gut stool
11962
11891
-
Gln
TTG
[ENA]
¡û
>WENV181523152
OGHG01000070
[OGHG] metagenome; Human gut stool
11974
11902
-
Glu
CTC
[ENA]
¡û
>WENV181523151
OGHG01000070
[OGHG] metagenome; Human gut stool
12116
12029
-
Ser
GCT
[ENA]
¡û
>WENV181523147
OGHG01000059
[OGHG] metagenome; Human gut stool
14461
14373
-
Ser
GGA
[ENA]
¡û
>WENV181523166
OGHG01000163
[OGHG] metagenome; Human gut stool
14811
14883
+
Arg
CCT
[ENA]
¡û
>WENV181523164
OGHG01000143
[OGHG] metagenome; Human gut stool
15208
15134
-
Pro
GGG
[ENA]
¡û
>WENV181523162
OGHG01000131
[OGHG] metagenome; Human gut stool
15685
15773
+
Ser
GGA
[ENA]
¡û
>WENV181523139
OGHG01000017
[OGHG] metagenome; Human gut stool
16928
16854
-
Asp
GTC
[ENA]
¡û
>WENV181523165
OGHG01000148
[OGHG] metagenome; Human gut stool
17004
16930
-
Ile2
CAT
[ENA]
¡û
>WENV181523158
OGHG01000096
[OGHG] metagenome; Human gut stool
18314
18387
+
Lys
TTT
[ENA]
¡û
>WENV181523146
OGHG01000059
[OGHG] metagenome; Human gut stool
20614
20529
-
Ser
TGA
[ENA]
¡û
>WENV181523144
OGHG01000044
[OGHG] metagenome; Human gut stool
21413
21488
+
Pro
TGG
[ENA]
¡û
>WENV181523149
OGHG01000061
[OGHG] metagenome; Human gut stool
21791
21865
+
Ala
GGC
[ENA]
¡û
>WENV181523141
OGHG01000024
[OGHG] metagenome; Human gut stool
22136
22065
-
Gln
CTG
[ENA]
¡û
>WENV181523155
OGHG01000072
[OGHG] metagenome; Human gut stool
26179
26105
-
Ala
TGC
[ENA]
¡û
>WENV181523150
OGHG01000063
[OGHG] metagenome; Human gut stool
27402
27330
-
Cys
GCA
[ENA]
¡û
>WENV181523140
OGHG01000022
[OGHG] metagenome; Human gut stool
35675
35601
-
Ala
GGC
[ENA]
¡û
>WENV181523134
OGHG01000004
[OGHG] metagenome; Human gut stool
70101
70174
+
Gly
GCC
[ENA]
¡û
>WENV181523135
OGHG01000004
[OGHG] metagenome; Human gut stool
70194
70278
+
Leu
TAA
[ENA]
¡û
>WENV181523136
OGHG01000005
[OGHG] metagenome; Human gut stool
72007
72081
+
Asn
GTT
[ENA]
¡û
>WENV181523133
OGHG01000002
[OGHG] metagenome; Human gut stool
72816
72742
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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