This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIMG] human gut metagenome; human gut
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182453054
OIMG01000050
[OIMG] human gut metagenome; human gut
65
137
+
Thr
GGT
[ENA]
¡û
>WENV182453111
OIMG01003131
[OIMG] human gut metagenome; human gut
94
178
+
Leu
TAG
[ENA]
¡û
>WENV182453106
OIMG01002689
[OIMG] human gut metagenome; human gut
152
227
+
Gly
GCC
[ENA]
¡û
>WENV182453075
OIMG01000225
[OIMG] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¡û
>WENV182453113
OIMG01003833
[OIMG] human gut metagenome; human gut
154
238
+
Leu
CAG
[ENA]
¡û
>WENV182453103
OIMG01002361
[OIMG] human gut metagenome; human gut
167
92
-
Pro
CGG
[ENA]
¡û
>WENV182453051
OIMG01000031
[OIMG] human gut metagenome; human gut
196
122
-
Glu
TTC
[ENA]
¡û
>WENV182453066
OIMG01000093
[OIMG] human gut metagenome; human gut
203
129
-
Ile2
CAT
[ENA]
¡û
>WENV182453070
OIMG01000123
[OIMG] human gut metagenome; human gut
207
134
-
fMet
CAT
[ENA]
¡û
>WENV182453094
OIMG01001066
[OIMG] human gut metagenome; human gut
212
287
+
Lys
CTT
[ENA]
¡û
>WENV182453084
OIMG01000442
[OIMG] human gut metagenome; human gut
232
157
-
His
GTG
[ENA]
¡û
>WENV182453097
OIMG01001211
[OIMG] human gut metagenome; human gut
244
317
+
Ile
GAT
[ENA]
¡û
>WENV182453102
OIMG01002361
[OIMG] human gut metagenome; human gut
267
197
-
Gln
CTG
[ENA]
¡û
>WENV182453107
OIMG01002689
[OIMG] human gut metagenome; human gut
285
375
+
Leu
TAA
[ENA]
¡û
>WENV182453095
OIMG01001066
[OIMG] human gut metagenome; human gut
290
364
+
Glu
CTC
[ENA]
¡û
>WENV182453110
OIMG01003000
[OIMG] human gut metagenome; human gut
307
379
+
Gln
CTG
[ENA]
¡û
>WENV182453105
OIMG01002604
[OIMG] human gut metagenome; human gut
336
263
-
Thr
CGT
[ENA]
¡û
>WENV182453104
OIMG01002487
[OIMG] human gut metagenome; human gut
384
309
-
Asn
GTT
[ENA]
¡û
>WENV182453068
OIMG01000103
[OIMG] human gut metagenome; human gut
385
303
-
Leu
TAG
[ENA]
¡û
>WENV182453100
OIMG01001758
[OIMG] human gut metagenome; human gut
398
322
-
Pro
GGG
[ENA]
¡û
>WENV182453109
OIMG01002755
[OIMG] human gut metagenome; human gut
406
478
+
Thr
CGT
[ENA]
¡û
>WENV182453098
OIMG01001211
[OIMG] human gut metagenome; human gut
410
482
+
Glu
TTC
[ENA]
¡û
>WENV182453091
OIMG01000595
[OIMG] human gut metagenome; human gut
434
360
-
Glu
TTC
[ENA]
¡û
>WENV182453112
OIMG01003438
[OIMG] human gut metagenome; human gut
450
375
-
Arg
CCT
[ENA]
¡û
>WENV182453108
OIMG01002729
[OIMG] human gut metagenome; human gut
463
538
+
Trp
CCA
[ENA]
¡û
>WENV182453096
OIMG01001154
[OIMG] human gut metagenome; human gut
467
542
+
Val
GAC
[ENA]
¡û
>WENV182453114
OIMG01004507
[OIMG] human gut metagenome; human gut
498
424
-
Arg
CCG
[ENA]
¡û
>WENV182453099
OIMG01001211
[OIMG] human gut metagenome; human gut
523
593
+
Cys
GCA
[ENA]
¡û
>WENV182453089
OIMG01000549
[OIMG] human gut metagenome; human gut
543
469
-
Phe
GAA
[ENA]
¡û
>WENV182453080
OIMG01000406
[OIMG] human gut metagenome; human gut
633
709
+
Ile
GAT
[ENA]
¡û
>WENV182453088
OIMG01000549
[OIMG] human gut metagenome; human gut
637
562
-
fMet
CAT
[ENA]
¡û
>WENV182453101
OIMG01001831
[OIMG] human gut metagenome; human gut
713
622
-
Ser
CGA
[ENA]
¡û
>WENV182453081
OIMG01000406
[OIMG] human gut metagenome; human gut
738
812
+
Ala
TGC
[ENA]
¡û
>WENV182453093
OIMG01000984
[OIMG] human gut metagenome; human gut
770
844
+
Cys
GCA
[ENA]
¡û
>WENV182453072
OIMG01000140
[OIMG] human gut metagenome; human gut
792
718
-
Met
CAT
[ENA]
¡û
>WENV182453071
OIMG01000140
[OIMG] human gut metagenome; human gut
927
853
-
Met
CAT
[ENA]
¡û
>WENV182453092
OIMG01000651
[OIMG] human gut metagenome; human gut
1316
1400
+
Leu
CAA
[ENA]
¡û
>WENV182453055
OIMG01000050
[OIMG] human gut metagenome; human gut
1430
1503
+
Trp
CCA
[ENA]
¡û
>WENV182453090
OIMG01000569
[OIMG] human gut metagenome; human gut
1568
1485
-
Leu
CAA
[ENA]
¡û
>WENV182453083
OIMG01000427
[OIMG] human gut metagenome; human gut
1649
1575
-
Glu
CTC
[ENA]
¡û
>WENV182453085
OIMG01000483
[OIMG] human gut metagenome; human gut
1688
1761
+
Lys
CTT
[ENA]
¡û
>WENV182453086
OIMG01000483
[OIMG] human gut metagenome; human gut
1785
1858
+
Lys
CTT
[ENA]
¡û
>WENV182453079
OIMG01000331
[OIMG] human gut metagenome; human gut
1799
1873
+
Ala
GGC
[ENA]
¡û
>WENV182453087
OIMG01000483
[OIMG] human gut metagenome; human gut
1878
1951
+
Lys
CTT
[ENA]
¡û
>WENV182453082
OIMG01000427
[OIMG] human gut metagenome; human gut
2091
2004
-
Ser
GCT
[ENA]
¡û
>WENV182453078
OIMG01000277
[OIMG] human gut metagenome; human gut
2521
2596
+
Gly
CCC
[ENA]
¡û
>WENV182453074
OIMG01000218
[OIMG] human gut metagenome; human gut
4325
4413
+
Ser
GGA
[ENA]
¡û
>WENV182453049
OIMG01000029
[OIMG] human gut metagenome; human gut
4821
4733
-
Ser
GGA
[ENA]
¡û
>WENV182453077
OIMG01000251
[OIMG] human gut metagenome; human gut
6168
6242
+
Arg
TCT
[ENA]
¡û
>WENV182453076
OIMG01000242
[OIMG] human gut metagenome; human gut
6367
6294
-
Thr
CGT
[ENA]
¡û
>WENV182453057
OIMG01000078
[OIMG] human gut metagenome; human gut
6649
6734
+
Ser
GCT
[ENA]
¡û
>WENV182453058
OIMG01000078
[OIMG] human gut metagenome; human gut
6740
6815
+
Arg
ACG
[ENA]
¡û
>WENV182453059
OIMG01000078
[OIMG] human gut metagenome; human gut
6822
6908
+
Ser
TGA
[ENA]
¡û
>WENV182453060
OIMG01000078
[OIMG] human gut metagenome; human gut
6914
6985
+
Gln
CTG
[ENA]
¡û
>WENV182453061
OIMG01000078
[OIMG] human gut metagenome; human gut
6994
7067
+
Phe
GAA
[ENA]
¡û
>WENV182453062
OIMG01000078
[OIMG] human gut metagenome; human gut
7185
7256
+
Gln
TTG
[ENA]
¡û
>WENV182453063
OIMG01000078
[OIMG] human gut metagenome; human gut
7269
7340
+
Arg
TCG
[ENA]
¡û
>WENV182453064
OIMG01000078
[OIMG] human gut metagenome; human gut
7346
7419
+
His
GTG
[ENA]
¡û
>WENV182453065
OIMG01000078
[OIMG] human gut metagenome; human gut
7424
7498
+
Thr
TGT
[ENA]
¡û
>WENV182453041
OIMG01000014
[OIMG] human gut metagenome; human gut
7781
7709
-
Arg
CCT
[ENA]
¡û
>WENV182453069
OIMG01000111
[OIMG] human gut metagenome; human gut
8205
8129
-
Val
TAC
[ENA]
¡û
>WENV182453073
OIMG01000145
[OIMG] human gut metagenome; human gut
11469
11544
+
Pro
TGG
[ENA]
¡û
>WENV182453067
OIMG01000095
[OIMG] human gut metagenome; human gut
12904
12977
+
Trp
CCA
[ENA]
¡û
>WENV182453048
OIMG01000015
[OIMG] human gut metagenome; human gut
13256
13174
-
Tyr
GTA
[ENA]
¡û
>WENV182453047
OIMG01000015
[OIMG] human gut metagenome; human gut
13492
13420
-
Glu
TTC
[ENA]
¡û
>WENV182453046
OIMG01000015
[OIMG] human gut metagenome; human gut
13568
13497
-
Gln
TTG
[ENA]
¡û
>WENV182453045
OIMG01000015
[OIMG] human gut metagenome; human gut
13646
13573
-
Trp
CCA
[ENA]
¡û
>WENV182453044
OIMG01000015
[OIMG] human gut metagenome; human gut
13726
13653
-
Asn
GTT
[ENA]
¡û
>WENV182453043
OIMG01000015
[OIMG] human gut metagenome; human gut
14017
13944
-
fMet
CAT
[ENA]
¡û
>WENV182453053
OIMG01000039
[OIMG] human gut metagenome; human gut
16089
16161
+
Arg
CCG
[ENA]
¡û
>WENV182453056
OIMG01000071
[OIMG] human gut metagenome; human gut
19003
19076
+
Gly
GCC
[ENA]
¡û
>WENV182453050
OIMG01000031
[OIMG] human gut metagenome; human gut
20330
20415
+
Ser
TGA
[ENA]
¡û
>WENV182453052
OIMG01000034
[OIMG] human gut metagenome; human gut
26842
26768
-
Thr
TGT
[ENA]
¡û
>WENV182453042
OIMG01000015
[OIMG] human gut metagenome; human gut
32532
32458
-
Asp
GTC
[ENA]
¡û
>WENV182453040
OIMG01000007
[OIMG] human gut metagenome; human gut
35485
35402
-
Tyr
GTA
[ENA]
¡û
>WENV182453039
OIMG01000005
[OIMG] human gut metagenome; human gut
37124
37053
-
Gln
TTG
[ENA]
¡û
>WENV182453036
OIMG01000001
[OIMG] human gut metagenome; human gut
38624
38549
-
Phe
GAA
[ENA]
¡û
>WENV182453035
OIMG01000001
[OIMG] human gut metagenome; human gut
38805
38878
+
Pro
CGG
[ENA]
¡û
>WENV182453038
OIMG01000002
[OIMG] human gut metagenome; human gut
64449
64374
-
Pro
GGG
[ENA]
¡û
>WENV182453037
OIMG01000002
[OIMG] human gut metagenome; human gut
92601
92672
+
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK