This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIUP] human gut metagenome; human gut
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182503623
OIUP01003069
[OIUP] human gut metagenome; human gut
47
120
+
Ala
GGC
[ENA]
¡û
>WENV182503615
OIUP01000980
[OIUP] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¡û
>WENV182503625
OIUP01003105
[OIUP] human gut metagenome; human gut
81
163
+
Tyr
GTA
[ENA]
¡û
>WENV182503606
OIUP01000297
[OIUP] human gut metagenome; human gut
88
161
+
Cys
GCA
[ENA]
¡û
>WENV182503632
OIUP01003825
[OIUP] human gut metagenome; human gut
115
43
-
Val
GAC
[ENA]
¡û
>WENV182503619
OIUP01002187
[OIUP] human gut metagenome; human gut
124
49
-
Thr
TGT
[ENA]
¡û
>WENV182503591
OIUP01000018
[OIUP] human gut metagenome; human gut
156
81
-
Asn
GTT
[ENA]
¡û
>WENV182503620
OIUP01002536
[OIUP] human gut metagenome; human gut
170
95
-
Ala
GGC
[ENA]
¡û
>WENV182503607
OIUP01000297
[OIUP] human gut metagenome; human gut
174
260
+
Leu
TAA
[ENA]
¡û
>WENV182503622
OIUP01002569
[OIUP] human gut metagenome; human gut
210
283
+
Gly
CCC
[ENA]
¡û
>WENV182503605
OIUP01000292
[OIUP] human gut metagenome; human gut
223
129
-
SeC
TCA
[ENA]
¡û
>WENV182503631
OIUP01003825
[OIUP] human gut metagenome; human gut
239
168
-
Cys
GCA
[ENA]
¡û
>WENV182503626
OIUP01003105
[OIUP] human gut metagenome; human gut
328
401
+
Ile2
CAT
[ENA]
¡û
>WENV182503630
OIUP01003825
[OIUP] human gut metagenome; human gut
341
268
-
Gly
GCC
[ENA]
¡û
>WENV182503628
OIUP01003597
[OIUP] human gut metagenome; human gut
348
423
+
Asn
GTT
[ENA]
¡û
>WENV182503612
OIUP01000516
[OIUP] human gut metagenome; human gut
404
479
+
His
GTG
[ENA]
¡û
>WENV182503629
OIUP01003597
[OIUP] human gut metagenome; human gut
426
501
+
Thr
TGT
[ENA]
¡û
>WENV182503627
OIUP01003105
[OIUP] human gut metagenome; human gut
435
524
+
Ser
TGA
[ENA]
¡û
>WENV182503621
OIUP01002563
[OIUP] human gut metagenome; human gut
446
522
+
Arg
TCT
[ENA]
¡û
>WENV182503613
OIUP01000516
[OIUP] human gut metagenome; human gut
500
586
+
Leu
CAG
[ENA]
¡û
>WENV182503624
OIUP01003069
[OIUP] human gut metagenome; human gut
523
448
-
Arg
CCG
[ENA]
¡û
>WENV182503618
OIUP01002138
[OIUP] human gut metagenome; human gut
523
449
-
Arg
CCT
[ENA]
¡û
>WENV182503602
OIUP01000254
[OIUP] human gut metagenome; human gut
524
616
+
Ser
GCT
[ENA]
¡û
>WENV182503610
OIUP01000503
[OIUP] human gut metagenome; human gut
572
486
-
Leu
GAG
[ENA]
¡û
>WENV182503617
OIUP01001823
[OIUP] human gut metagenome; human gut
578
665
+
Ser
TGA
[ENA]
¡û
>WENV182503616
OIUP01001039
[OIUP] human gut metagenome; human gut
618
693
+
Ile2
CAT
[ENA]
¡û
>WENV182503603
OIUP01000254
[OIUP] human gut metagenome; human gut
620
696
+
Arg
ACG
[ENA]
¡û
>WENV182503609
OIUP01000330
[OIUP] human gut metagenome; human gut
1021
946
-
Lys
TTT
[ENA]
¡û
>WENV182503608
OIUP01000330
[OIUP] human gut metagenome; human gut
1100
1025
-
Val
TAC
[ENA]
¡û
>WENV182503601
OIUP01000250
[OIUP] human gut metagenome; human gut
1284
1209
-
Asn
GTT
[ENA]
¡û
>WENV182503594
OIUP01000037
[OIUP] human gut metagenome; human gut
1289
1364
+
Phe
GAA
[ENA]
¡û
>WENV182503614
OIUP01000766
[OIUP] human gut metagenome; human gut
1415
1339
-
Asp
GTC
[ENA]
¡û
>WENV182503611
OIUP01000506
[OIUP] human gut metagenome; human gut
1531
1607
+
Pro
GGG
[ENA]
¡û
>WENV182503593
OIUP01000033
[OIUP] human gut metagenome; human gut
1774
1849
+
Glu
TTC
[ENA]
¡û
>WENV182503592
OIUP01000028
[OIUP] human gut metagenome; human gut
1809
1733
-
Pro
CGG
[ENA]
¡û
>WENV182503604
OIUP01000259
[OIUP] human gut metagenome; human gut
1921
1846
-
Gly
GCC
[ENA]
¡û
>WENV182503598
OIUP01000099
[OIUP] human gut metagenome; human gut
2023
1947
-
fMet
CAT
[ENA]
¡û
>WENV182503599
OIUP01000226
[OIUP] human gut metagenome; human gut
2125
2038
-
Ser
GGA
[ENA]
¡û
>WENV182503600
OIUP01000250
[OIUP] human gut metagenome; human gut
2276
2365
+
Ser
CGA
[ENA]
¡û
>WENV182503597
OIUP01000075
[OIUP] human gut metagenome; human gut
2965
2890
-
Thr
GGT
[ENA]
¡û
>WENV182503596
OIUP01000075
[OIUP] human gut metagenome; human gut
3046
2972
-
Gly
TCC
[ENA]
¡û
>WENV182503595
OIUP01000075
[OIUP] human gut metagenome; human gut
3247
3163
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK