This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKBQ] human gut metagenome; human gut
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182822981
OKBQ01000031
[OKBQ] human gut metagenome; human gut
1
75
+
Val
TAC
[ENA]
¡û
>WENV182822982
OKBQ01000031
[OKBQ] human gut metagenome; human gut
77
151
+
Lys
TTT
[ENA]
¡û
>WENV182823017
OKBQ01001371
[OKBQ] human gut metagenome; human gut
81
8
-
Gly
TCC
[ENA]
¡û
>WENV182822990
OKBQ01000086
[OKBQ] human gut metagenome; human gut
90
165
+
Glu
CTC
[ENA]
¡û
>WENV182823023
OKBQ01002238
[OKBQ] human gut metagenome; human gut
103
29
-
Pro
GGG
[ENA]
¡û
>WENV182823011
OKBQ01000875
[OKBQ] human gut metagenome; human gut
110
36
-
Leu
CAA
[ENA]
¡û
>WENV182822994
OKBQ01000207
[OKBQ] human gut metagenome; human gut
115
31
-
Leu
CAG
[ENA]
¡û
>WENV182822983
OKBQ01000031
[OKBQ] human gut metagenome; human gut
157
240
+
Leu
TAG
[ENA]
¡û
>WENV182823013
OKBQ01001025
[OKBQ] human gut metagenome; human gut
159
235
+
Lys
CTT
[ENA]
¡û
>WENV182823016
OKBQ01001370
[OKBQ] human gut metagenome; human gut
186
261
+
Arg
ACG
[ENA]
¡û
>WENV182822998
OKBQ01000254
[OKBQ] human gut metagenome; human gut
223
296
+
Ala
GGC
[ENA]
¡û
>WENV182823024
OKBQ01002365
[OKBQ] human gut metagenome; human gut
243
167
-
Ile
GAT
[ENA]
¡û
>WENV182822984
OKBQ01000031
[OKBQ] human gut metagenome; human gut
256
331
+
Thr
TGT
[ENA]
¡û
>WENV182823022
OKBQ01001846
[OKBQ] human gut metagenome; human gut
263
336
+
Arg
CCT
[ENA]
¡û
>WENV182823014
OKBQ01001167
[OKBQ] human gut metagenome; human gut
329
404
+
Thr
CGT
[ENA]
¡û
>WENV182823002
OKBQ01000544
[OKBQ] human gut metagenome; human gut
330
258
-
Gln
TTG
[ENA]
¡û
>WENV182823003
OKBQ01000730
[OKBQ] human gut metagenome; human gut
335
260
-
His
GTG
[ENA]
¡û
>WENV182822985
OKBQ01000031
[OKBQ] human gut metagenome; human gut
341
412
+
Gly
GCC
[ENA]
¡û
>WENV182823000
OKBQ01000378
[OKBQ] human gut metagenome; human gut
406
323
-
Leu
TAG
[ENA]
¡û
>WENV182822986
OKBQ01000031
[OKBQ] human gut metagenome; human gut
429
514
+
Leu
TAA
[ENA]
¡û
>WENV182823020
OKBQ01001383
[OKBQ] human gut metagenome; human gut
516
433
-
Leu
TAA
[ENA]
¡û
>WENV182822987
OKBQ01000031
[OKBQ] human gut metagenome; human gut
524
599
+
Arg
ACG
[ENA]
¡û
>WENV182823004
OKBQ01000755
[OKBQ] human gut metagenome; human gut
525
607
+
Tyr
GTA
[ENA]
¡û
>WENV182822995
OKBQ01000241
[OKBQ] human gut metagenome; human gut
533
606
+
Glu
TTC
[ENA]
¡û
>WENV182823007
OKBQ01000806
[OKBQ] human gut metagenome; human gut
578
653
+
Ala
TGC
[ENA]
¡û
>WENV182822988
OKBQ01000031
[OKBQ] human gut metagenome; human gut
608
681
+
Pro
TGG
[ENA]
¡û
>WENV182823019
OKBQ01001383
[OKBQ] human gut metagenome; human gut
624
533
-
Ile
TAT
[ENA]
¡û
>WENV182823008
OKBQ01000806
[OKBQ] human gut metagenome; human gut
656
731
+
Ile
GAT
[ENA]
¡û
>WENV182822996
OKBQ01000241
[OKBQ] human gut metagenome; human gut
658
732
+
Asp
GTC
[ENA]
¡û
>WENV182823015
OKBQ01001187
[OKBQ] human gut metagenome; human gut
676
749
+
Gly
CCC
[ENA]
¡û
>WENV182823021
OKBQ01001425
[OKBQ] human gut metagenome; human gut
678
753
+
Arg
CCG
[ENA]
¡û
>WENV182822989
OKBQ01000031
[OKBQ] human gut metagenome; human gut
701
773
+
Ala
TGC
[ENA]
¡û
>WENV182823005
OKBQ01000755
[OKBQ] human gut metagenome; human gut
732
805
+
Thr
GGT
[ENA]
¡û
>WENV182823009
OKBQ01000806
[OKBQ] human gut metagenome; human gut
763
852
+
Ser
GCT
[ENA]
¡û
>WENV182823018
OKBQ01001383
[OKBQ] human gut metagenome; human gut
768
693
-
Val
TAC
[ENA]
¡û
>WENV182823012
OKBQ01000918
[OKBQ] human gut metagenome; human gut
776
701
-
Arg
TCT
[ENA]
¡û
>WENV182823006
OKBQ01000755
[OKBQ] human gut metagenome; human gut
846
920
+
Met
CAT
[ENA]
¡û
>WENV182823010
OKBQ01000806
[OKBQ] human gut metagenome; human gut
872
945
+
Glu
TTC
[ENA]
¡û
>WENV182823001
OKBQ01000521
[OKBQ] human gut metagenome; human gut
1115
1041
-
Val
CAC
[ENA]
¡û
>WENV182822991
OKBQ01000087
[OKBQ] human gut metagenome; human gut
1299
1373
+
Gly
GCC
[ENA]
¡û
>WENV182822997
OKBQ01000253
[OKBQ] human gut metagenome; human gut
1399
1486
+
Ser
GGA
[ENA]
¡û
>WENV182822992
OKBQ01000087
[OKBQ] human gut metagenome; human gut
1409
1480
+
Cys
GCA
[ENA]
¡û
>WENV182822999
OKBQ01000264
[OKBQ] human gut metagenome; human gut
1455
1543
+
Ser
GCT
[ENA]
¡û
>WENV182822993
OKBQ01000087
[OKBQ] human gut metagenome; human gut
1481
1553
+
Val
GAC
[ENA]
¡û
>WENV182822980
OKBQ01000024
[OKBQ] human gut metagenome; human gut
2642
2554
-
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK