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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OKGC] human gut metagenome; human gut
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182837118
OKGC01002485
[OKGC] human gut metagenome; human gut
53
125
+
Gln
CTG
[ENA]
¡û
>WENV182837099
OKGC01000050
[OKGC] human gut metagenome; human gut
58
133
+
Lys
TTT
[ENA]
¡û
>WENV182837110
OKGC01001067
[OKGC] human gut metagenome; human gut
103
177
+
Ala
TGC
[ENA]
¡û
>WENV182837086
OKGC01000020
[OKGC] human gut metagenome; human gut
133
59
-
Gly
TCC
[ENA]
¡û
>WENV182837089
OKGC01000031
[OKGC] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¡û
>WENV182837107
OKGC01000749
[OKGC] human gut metagenome; human gut
162
72
-
Ser
CGA
[ENA]
¡û
>WENV182837120
OKGC01002542
[OKGC] human gut metagenome; human gut
199
274
+
Trp
CCA
[ENA]
¡û
>WENV182837108
OKGC01000887
[OKGC] human gut metagenome; human gut
215
291
+
Pro
CGG
[ENA]
¡û
>WENV182837109
OKGC01000922
[OKGC] human gut metagenome; human gut
245
171
-
Ile2
CAT
[ENA]
¡û
>WENV182837119
OKGC01002485
[OKGC] human gut metagenome; human gut
261
336
+
Glu
CTC
[ENA]
¡û
>WENV182837115
OKGC01002128
[OKGC] human gut metagenome; human gut
267
352
+
Ser
GGA
[ENA]
¡û
>WENV182837111
OKGC01001304
[OKGC] human gut metagenome; human gut
273
190
-
Leu
TAG
[ENA]
¡û
>WENV182837121
OKGC01002542
[OKGC] human gut metagenome; human gut
282
358
+
Arg
ACG
[ENA]
¡û
>WENV182837113
OKGC01001715
[OKGC] human gut metagenome; human gut
315
405
+
Ser
GCT
[ENA]
¡û
>WENV182837085
OKGC01000020
[OKGC] human gut metagenome; human gut
334
250
-
Tyr
GTA
[ENA]
¡û
>WENV182837117
OKGC01002466
[OKGC] human gut metagenome; human gut
390
306
-
Leu
CAG
[ENA]
¡û
>WENV182837084
OKGC01000020
[OKGC] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¡û
>WENV182837116
OKGC01002466
[OKGC] human gut metagenome; human gut
493
407
-
Leu
GAG
[ENA]
¡û
>WENV182837114
OKGC01001875
[OKGC] human gut metagenome; human gut
531
458
-
Asn
GTT
[ENA]
¡û
>WENV182837112
OKGC01001579
[OKGC] human gut metagenome; human gut
593
518
-
fMet
CAT
[ENA]
¡û
>WENV182837105
OKGC01000372
[OKGC] human gut metagenome; human gut
689
613
-
Arg
CCT
[ENA]
¡û
>WENV182837106
OKGC01000601
[OKGC] human gut metagenome; human gut
743
668
-
Thr
CGT
[ENA]
¡û
>WENV182837102
OKGC01000175
[OKGC] human gut metagenome; human gut
872
799
-
Glu
TTC
[ENA]
¡û
>WENV182837104
OKGC01000291
[OKGC] human gut metagenome; human gut
898
823
-
Ala
TGC
[ENA]
¡û
>WENV182837103
OKGC01000291
[OKGC] human gut metagenome; human gut
979
903
-
Ile2
CAT
[ENA]
¡û
>WENV182837065
OKGC01000011
[OKGC] human gut metagenome; human gut
3147
3060
-
Ser
GGA
[ENA]
¡û
>WENV182837101
OKGC01000054
[OKGC] human gut metagenome; human gut
3881
3806
-
Ala
TGC
[ENA]
¡û
>WENV182837100
OKGC01000050
[OKGC] human gut metagenome; human gut
5353
5428
+
Asn
GTT
[ENA]
¡û
>WENV182837083
OKGC01000020
[OKGC] human gut metagenome; human gut
8132
8056
-
Pro
TGG
[ENA]
¡û
>WENV182837087
OKGC01000025
[OKGC] human gut metagenome; human gut
9405
9481
+
Asp
GTC
[ENA]
¡û
>WENV182837095
OKGC01000043
[OKGC] human gut metagenome; human gut
12498
12574
+
Met
CAT
[ENA]
¡û
>WENV182837096
OKGC01000043
[OKGC] human gut metagenome; human gut
12583
12667
+
Leu
TAG
[ENA]
¡û
>WENV182837097
OKGC01000043
[OKGC] human gut metagenome; human gut
12691
12765
+
Gln
TTG
[ENA]
¡û
>WENV182837098
OKGC01000043
[OKGC] human gut metagenome; human gut
12798
12872
+
Gln
TTG
[ENA]
¡û
>WENV182837081
OKGC01000019
[OKGC] human gut metagenome; human gut
13826
13750
-
fMet
CAT
[ENA]
¡û
>WENV182837074
OKGC01000014
[OKGC] human gut metagenome; human gut
15192
15116
-
Pro
TGG
[ENA]
¡û
>WENV182837073
OKGC01000014
[OKGC] human gut metagenome; human gut
15323
15237
-
Leu
CAG
[ENA]
¡û
>WENV182837072
OKGC01000014
[OKGC] human gut metagenome; human gut
15420
15345
-
His
GTG
[ENA]
¡û
>WENV182837071
OKGC01000014
[OKGC] human gut metagenome; human gut
15564
15488
-
Arg
CCG
[ENA]
¡û
>WENV182837063
OKGC01000007
[OKGC] human gut metagenome; human gut
15656
15570
-
Leu
TAA
[ENA]
¡û
>WENV182837080
OKGC01000019
[OKGC] human gut metagenome; human gut
15733
15647
-
Leu
GAG
[ENA]
¡û
>WENV182837062
OKGC01000007
[OKGC] human gut metagenome; human gut
15741
15668
-
Cys
GCA
[ENA]
¡û
>WENV182837061
OKGC01000007
[OKGC] human gut metagenome; human gut
15868
15793
-
Gly
GCC
[ENA]
¡û
>WENV182837090
OKGC01000032
[OKGC] human gut metagenome; human gut
18489
18561
+
Arg
CCT
[ENA]
¡û
>WENV182837094
OKGC01000037
[OKGC] human gut metagenome; human gut
23878
23802
-
Arg
ACG
[ENA]
¡û
>WENV182837093
OKGC01000037
[OKGC] human gut metagenome; human gut
24019
23943
-
Arg
ACG
[ENA]
¡û
>WENV182837076
OKGC01000015
[OKGC] human gut metagenome; human gut
27689
27605
-
Tyr
GTA
[ENA]
¡û
>WENV182837075
OKGC01000015
[OKGC] human gut metagenome; human gut
27808
27724
-
Tyr
GTA
[ENA]
¡û
>WENV182837092
OKGC01000032
[OKGC] human gut metagenome; human gut
36784
36709
-
Ala
GGC
[ENA]
¡û
>WENV182837091
OKGC01000032
[OKGC] human gut metagenome; human gut
36901
36826
-
Ala
GGC
[ENA]
¡û
>WENV182837088
OKGC01000025
[OKGC] human gut metagenome; human gut
38909
38982
+
Thr
CGT
[ENA]
¡û
>WENV182837044
OKGC01000003
[OKGC] human gut metagenome; human gut
64604
64680
+
fMet
CAT
[ENA]
¡û
>WENV182837045
OKGC01000003
[OKGC] human gut metagenome; human gut
64725
64801
+
fMet
CAT
[ENA]
¡û
>WENV182837046
OKGC01000003
[OKGC] human gut metagenome; human gut
64846
64922
+
fMet
CAT
[ENA]
¡û
>WENV182837077
OKGC01000017
[OKGC] human gut metagenome; human gut
69682
69757
+
Ile2
CAT
[ENA]
¡û
>WENV182837078
OKGC01000018
[OKGC] human gut metagenome; human gut
77613
77700
+
Ser
TGA
[ENA]
¡û
>WENV182837057
OKGC01000007
[OKGC] human gut metagenome; human gut
80637
80712
+
Asn
GTT
[ENA]
¡û
>WENV182837079
OKGC01000018
[OKGC] human gut metagenome; human gut
83155
83242
+
Ser
TGA
[ENA]
¡û
>WENV182837053
OKGC01000004
[OKGC] human gut metagenome; human gut
90048
89964
-
Leu
CAA
[ENA]
¡û
>WENV182837058
OKGC01000007
[OKGC] human gut metagenome; human gut
91582
91657
+
Asn
GTT
[ENA]
¡û
>WENV182837070
OKGC01000014
[OKGC] human gut metagenome; human gut
95633
95727
+
SeC
TCA
[ENA]
¡û
>WENV182837068
OKGC01000012
[OKGC] human gut metagenome; human gut
98395
98320
-
Arg
TCT
[ENA]
¡û
>WENV182837082
OKGC01000020
[OKGC] human gut metagenome; human gut
100091
100016
-
Trp
CCA
[ENA]
¡û
>WENV182837064
OKGC01000009
[OKGC] human gut metagenome; human gut
102828
102752
-
Pro
GGG
[ENA]
¡û
>WENV182837060
OKGC01000007
[OKGC] human gut metagenome; human gut
105411
105336
-
Asn
GTT
[ENA]
¡û
>WENV182837059
OKGC01000007
[OKGC] human gut metagenome; human gut
107160
107235
+
Asn
GTT
[ENA]
¡û
>WENV182837069
OKGC01000013
[OKGC] human gut metagenome; human gut
111556
111480
-
Arg
TCT
[ENA]
¡û
>WENV182837048
OKGC01000003
[OKGC] human gut metagenome; human gut
138245
138172
-
Gly
CCC
[ENA]
¡û
>WENV182837066
OKGC01000012
[OKGC] human gut metagenome; human gut
162291
162367
+
Val
GAC
[ENA]
¡û
>WENV182837067
OKGC01000012
[OKGC] human gut metagenome; human gut
162372
162448
+
Val
GAC
[ENA]
¡û
>WENV182837041
OKGC01000001
[OKGC] human gut metagenome; human gut
198831
198907
+
Arg
TCT
[ENA]
¡û
>WENV182837052
OKGC01000004
[OKGC] human gut metagenome; human gut
215663
215588
-
Gly
GCC
[ENA]
¡û
>WENV182837051
OKGC01000004
[OKGC] human gut metagenome; human gut
215784
215709
-
Gly
GCC
[ENA]
¡û
>WENV182837050
OKGC01000004
[OKGC] human gut metagenome; human gut
215905
215830
-
Gly
GCC
[ENA]
¡û
>WENV182837054
OKGC01000005
[OKGC] human gut metagenome; human gut
229422
229508
+
Leu
CAG
[ENA]
¡û
>WENV182837055
OKGC01000005
[OKGC] human gut metagenome; human gut
229537
229622
+
Leu
CAG
[ENA]
¡û
>WENV182837056
OKGC01000005
[OKGC] human gut metagenome; human gut
229655
229741
+
Leu
CAG
[ENA]
¡û
>WENV182837047
OKGC01000003
[OKGC] human gut metagenome; human gut
230845
230920
+
Phe
GAA
[ENA]
¡û
>WENV182837049
OKGC01000004
[OKGC] human gut metagenome; human gut
249139
249214
+
Phe
GAA
[ENA]
¡û
>WENV182837043
OKGC01000001
[OKGC] human gut metagenome; human gut
348298
348224
-
Gln
CTG
[ENA]
¡û
>WENV182837042
OKGC01000001
[OKGC] human gut metagenome; human gut
348407
348333
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK