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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKGY] human gut metagenome; human gut
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182838862
OKGY01000010
[OKGY] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¡û
>WENV182838918
OKGY01001307
[OKGY] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¡û
>WENV182838926
OKGY01001585
[OKGY] human gut metagenome; human gut
76
151
+
Met
CAT
[ENA]
¡û
>WENV182838875
OKGY01000020
[OKGY] human gut metagenome; human gut
77
1
-
fMet
CAT
[ENA]
¡û
>WENV182838876
OKGY01000028
[OKGY] human gut metagenome; human gut
117
193
+
Arg
ACG
[ENA]
¡û
>WENV182838941
OKGY01004441
[OKGY] human gut metagenome; human gut
121
207
+
Leu
GAG
[ENA]
¡û
>WENV182838937
OKGY01003467
[OKGY] human gut metagenome; human gut
146
218
+
Trp
CCA
[ENA]
¡û
>WENV182838906
OKGY01000312
[OKGY] human gut metagenome; human gut
169
94
-
Ala
GGC
[ENA]
¡û
>WENV182838927
OKGY01001585
[OKGY] human gut metagenome; human gut
170
245
+
Ile2
CAT
[ENA]
¡û
>WENV182838919
OKGY01001307
[OKGY] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¡û
>WENV182838874
OKGY01000020
[OKGY] human gut metagenome; human gut
187
111
-
fMet
CAT
[ENA]
¡û
>WENV182838936
OKGY01003140
[OKGY] human gut metagenome; human gut
202
127
-
Glu
TTC
[ENA]
¡û
>WENV182838917
OKGY01001276
[OKGY] human gut metagenome; human gut
211
138
-
Arg
CCG
[ENA]
¡û
>WENV182838907
OKGY01000320
[OKGY] human gut metagenome; human gut
214
128
-
Leu
GAG
[ENA]
¡û
>WENV182838938
OKGY01003467
[OKGY] human gut metagenome; human gut
228
302
+
His
GTG
[ENA]
¡û
>WENV182838920
OKGY01001307
[OKGY] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¡û
>WENV182838928
OKGY01001585
[OKGY] human gut metagenome; human gut
278
367
+
Ser
TGA
[ENA]
¡û
>WENV182838939
OKGY01003467
[OKGY] human gut metagenome; human gut
309
383
+
Gln
TTG
[ENA]
¡û
>WENV182838921
OKGY01001307
[OKGY] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¡û
>WENV182838929
OKGY01001585
[OKGY] human gut metagenome; human gut
400
475
+
fMet
CAT
[ENA]
¡û
>WENV182838940
OKGY01003700
[OKGY] human gut metagenome; human gut
444
530
+
Ser
GGA
[ENA]
¡û
>WENV182838922
OKGY01001307
[OKGY] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¡û
>WENV182838930
OKGY01001585
[OKGY] human gut metagenome; human gut
513
589
+
Asp
GTC
[ENA]
¡û
>WENV182838923
OKGY01001307
[OKGY] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¡û
>WENV182838931
OKGY01001585
[OKGY] human gut metagenome; human gut
591
661
+
Gly
TCC
[ENA]
¡û
>WENV182838924
OKGY01001307
[OKGY] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¡û
>WENV182838935
OKGY01001700
[OKGY] human gut metagenome; human gut
645
721
+
Arg
TCT
[ENA]
¡û
>WENV182838932
OKGY01001585
[OKGY] human gut metagenome; human gut
670
745
+
Ile
GAT
[ENA]
¡û
>WENV182838916
OKGY01000560
[OKGY] human gut metagenome; human gut
719
644
-
Arg
TCT
[ENA]
¡û
>WENV182838925
OKGY01001307
[OKGY] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¡û
>WENV182838933
OKGY01001585
[OKGY] human gut metagenome; human gut
758
831
+
Glu
TTC
[ENA]
¡û
>WENV182838934
OKGY01001585
[OKGY] human gut metagenome; human gut
857
931
+
Val
TAC
[ENA]
¡û
>WENV182838908
OKGY01000426
[OKGY] human gut metagenome; human gut
1837
1909
+
Val
TAC
[ENA]
¡û
>WENV182838909
OKGY01000426
[OKGY] human gut metagenome; human gut
1912
1984
+
Asp
GTC
[ENA]
¡û
>WENV182838910
OKGY01000426
[OKGY] human gut metagenome; human gut
2004
2076
+
Lys
TTT
[ENA]
¡û
>WENV182838915
OKGY01000496
[OKGY] human gut metagenome; human gut
2025
2097
+
Ala
TGC
[ENA]
¡û
>WENV182838911
OKGY01000426
[OKGY] human gut metagenome; human gut
2081
2164
+
Leu
TAG
[ENA]
¡û
>WENV182838873
OKGY01000019
[OKGY] human gut metagenome; human gut
2136
2049
-
Ser
GGA
[ENA]
¡û
>WENV182838912
OKGY01000426
[OKGY] human gut metagenome; human gut
2177
2249
+
Thr
TGT
[ENA]
¡û
>WENV182838914
OKGY01000453
[OKGY] human gut metagenome; human gut
2204
2129
-
Arg
CCT
[ENA]
¡û
>WENV182838913
OKGY01000426
[OKGY] human gut metagenome; human gut
2256
2329
+
Glu
TTC
[ENA]
¡û
>WENV182838891
OKGY01000170
[OKGY] human gut metagenome; human gut
2582
2496
-
Leu
TAA
[ENA]
¡û
>WENV182838890
OKGY01000170
[OKGY] human gut metagenome; human gut
2668
2595
-
Cys
GCA
[ENA]
¡û
>WENV182838904
OKGY01000307
[OKGY] human gut metagenome; human gut
2760
2852
+
Ser
GCT
[ENA]
¡û
>WENV182838889
OKGY01000170
[OKGY] human gut metagenome; human gut
2797
2722
-
Gly
GCC
[ENA]
¡û
>WENV182838905
OKGY01000307
[OKGY] human gut metagenome; human gut
2856
2932
+
Arg
ACG
[ENA]
¡û
>WENV182838885
OKGY01000079
[OKGY] human gut metagenome; human gut
3031
2944
-
Ser
GGA
[ENA]
¡û
>WENV182838903
OKGY01000284
[OKGY] human gut metagenome; human gut
3177
3102
-
Gly
GCC
[ENA]
¡û
>WENV182838887
OKGY01000081
[OKGY] human gut metagenome; human gut
3502
3426
-
Arg
TCT
[ENA]
¡û
>WENV182838899
OKGY01000197
[OKGY] human gut metagenome; human gut
3508
3583
+
Thr
TGT
[ENA]
¡û
>WENV182838900
OKGY01000197
[OKGY] human gut metagenome; human gut
3592
3676
+
Tyr
GTA
[ENA]
¡û
>WENV182838898
OKGY01000187
[OKGY] human gut metagenome; human gut
3764
3691
-
Pro
TGG
[ENA]
¡û
>WENV182838901
OKGY01000197
[OKGY] human gut metagenome; human gut
3793
3867
+
Gly
TCC
[ENA]
¡û
>WENV182838902
OKGY01000197
[OKGY] human gut metagenome; human gut
3874
3949
+
Thr
GGT
[ENA]
¡û
>WENV182838897
OKGY01000187
[OKGY] human gut metagenome; human gut
3927
3854
-
Arg
ACG
[ENA]
¡û
>WENV182838896
OKGY01000187
[OKGY] human gut metagenome; human gut
4027
3942
-
Leu
TAA
[ENA]
¡û
>WENV182838895
OKGY01000187
[OKGY] human gut metagenome; human gut
4114
4043
-
Gly
GCC
[ENA]
¡û
>WENV182838894
OKGY01000187
[OKGY] human gut metagenome; human gut
4194
4119
-
Thr
TGT
[ENA]
¡û
>WENV182838893
OKGY01000187
[OKGY] human gut metagenome; human gut
4283
4200
-
Leu
TAG
[ENA]
¡û
>WENV182838892
OKGY01000187
[OKGY] human gut metagenome; human gut
4372
4298
-
Lys
TTT
[ENA]
¡û
>WENV182838883
OKGY01000068
[OKGY] human gut metagenome; human gut
5007
5094
+
Ser
TGA
[ENA]
¡û
>WENV182838849
OKGY01000003
[OKGY] human gut metagenome; human gut
7532
7448
-
Tyr
GTA
[ENA]
¡û
>WENV182838848
OKGY01000003
[OKGY] human gut metagenome; human gut
7650
7566
-
Tyr
GTA
[ENA]
¡û
>WENV182838884
OKGY01000077
[OKGY] human gut metagenome; human gut
7983
8058
+
Phe
GAA
[ENA]
¡û
>WENV182838888
OKGY01000094
[OKGY] human gut metagenome; human gut
8203
8279
+
Asp
GTC
[ENA]
¡û
>WENV182838886
OKGY01000080
[OKGY] human gut metagenome; human gut
12777
12852
+
Ile2
CAT
[ENA]
¡û
>WENV182838877
OKGY01000034
[OKGY] human gut metagenome; human gut
13615
13531
-
Leu
CAA
[ENA]
¡û
>WENV182838854
OKGY01000009
[OKGY] human gut metagenome; human gut
21329
21405
+
Met
CAT
[ENA]
¡û
>WENV182838855
OKGY01000009
[OKGY] human gut metagenome; human gut
21416
21500
+
Leu
TAG
[ENA]
¡û
>WENV182838856
OKGY01000009
[OKGY] human gut metagenome; human gut
21524
21598
+
Gln
TTG
[ENA]
¡û
>WENV182838857
OKGY01000009
[OKGY] human gut metagenome; human gut
21633
21707
+
Gln
TTG
[ENA]
¡û
>WENV182838858
OKGY01000009
[OKGY] human gut metagenome; human gut
21723
21799
+
Met
CAT
[ENA]
¡û
>WENV182838859
OKGY01000009
[OKGY] human gut metagenome; human gut
21848
21922
+
Gln
CTG
[ENA]
¡û
>WENV182838860
OKGY01000009
[OKGY] human gut metagenome; human gut
21960
22034
+
Gln
CTG
[ENA]
¡û
>WENV182838881
OKGY01000049
[OKGY] human gut metagenome; human gut
27229
27154
-
Asn
GTT
[ENA]
¡û
>WENV182838882
OKGY01000051
[OKGY] human gut metagenome; human gut
28921
28996
+
Phe
GAA
[ENA]
¡û
>WENV182838880
OKGY01000049
[OKGY] human gut metagenome; human gut
29638
29563
-
Asn
GTT
[ENA]
¡û
>WENV182838879
OKGY01000049
[OKGY] human gut metagenome; human gut
31387
31462
+
Asn
GTT
[ENA]
¡û
>WENV182838851
OKGY01000007
[OKGY] human gut metagenome; human gut
32520
32447
-
Gly
CCC
[ENA]
¡û
>WENV182838867
OKGY01000013
[OKGY] human gut metagenome; human gut
33173
33249
+
Val
GAC
[ENA]
¡û
>WENV182838868
OKGY01000013
[OKGY] human gut metagenome; human gut
33254
33330
+
Val
GAC
[ENA]
¡û
>WENV182838863
OKGY01000010
[OKGY] human gut metagenome; human gut
34607
34683
+
Arg
CCG
[ENA]
¡û
>WENV182838864
OKGY01000010
[OKGY] human gut metagenome; human gut
34742
34817
+
His
GTG
[ENA]
¡û
>WENV182838865
OKGY01000010
[OKGY] human gut metagenome; human gut
34838
34924
+
Leu
CAG
[ENA]
¡û
>WENV182838866
OKGY01000010
[OKGY] human gut metagenome; human gut
34967
35043
+
Pro
TGG
[ENA]
¡û
>WENV182838872
OKGY01000018
[OKGY] human gut metagenome; human gut
41589
41513
-
Pro
CGG
[ENA]
¡û
>WENV182838878
OKGY01000035
[OKGY] human gut metagenome; human gut
45608
45694
+
Leu
GAG
[ENA]
¡û
>WENV182838871
OKGY01000017
[OKGY] human gut metagenome; human gut
70845
70751
-
SeC
TCA
[ENA]
¡û
>WENV182838852
OKGY01000008
[OKGY] human gut metagenome; human gut
72418
72492
+
Arg
CCT
[ENA]
¡û
>WENV182838870
OKGY01000015
[OKGY] human gut metagenome; human gut
73538
73449
-
Ser
CGA
[ENA]
¡û
>WENV182838869
OKGY01000015
[OKGY] human gut metagenome; human gut
74530
74605
+
Asn
GTT
[ENA]
¡û
>WENV182838850
OKGY01000004
[OKGY] human gut metagenome; human gut
87458
87383
-
Thr
CGT
[ENA]
¡û
>WENV182838861
OKGY01000009
[OKGY] human gut metagenome; human gut
124265
124189
-
Arg
TCT
[ENA]
¡û
>WENV182838853
OKGY01000008
[OKGY] human gut metagenome; human gut
124843
124768
-
Ala
GGC
[ENA]
¡û
>WENV182838847
OKGY01000001
[OKGY] human gut metagenome; human gut
153998
154074
+
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK