This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKOT] human gut metagenome; human gut
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182860351
OKOT01003058
[OKOT] human gut metagenome; human gut
73
1
-
Ile2
CAT
[ENA]
¡û
>WENV182860348
OKOT01002565
[OKOT] human gut metagenome; human gut
106
182
+
Asp
GTC
[ENA]
¡û
>WENV182860345
OKOT01002161
[OKOT] human gut metagenome; human gut
136
212
+
Pro
GGG
[ENA]
¡û
>WENV182860341
OKOT01001170
[OKOT] human gut metagenome; human gut
177
93
-
Tyr
GTA
[ENA]
¡û
>WENV182860338
OKOT01000464
[OKOT] human gut metagenome; human gut
195
120
-
Glu
TTC
[ENA]
¡û
>WENV182860346
OKOT01002194
[OKOT] human gut metagenome; human gut
209
293
+
Leu
CAA
[ENA]
¡û
>WENV182860344
OKOT01001923
[OKOT] human gut metagenome; human gut
224
149
-
Thr
CGT
[ENA]
¡û
>WENV182860343
OKOT01001898
[OKOT] human gut metagenome; human gut
234
309
+
Phe
GAA
[ENA]
¡û
>WENV182860349
OKOT01002565
[OKOT] human gut metagenome; human gut
236
311
+
Trp
CCA
[ENA]
¡û
>WENV182860347
OKOT01002255
[OKOT] human gut metagenome; human gut
243
154
-
Ser
CGA
[ENA]
¡û
>WENV182860350
OKOT01002750
[OKOT] human gut metagenome; human gut
560
634
+
Arg
CCT
[ENA]
¡û
>WENV182860339
OKOT01000506
[OKOT] human gut metagenome; human gut
741
828
+
Ser
TGA
[ENA]
¡û
>WENV182860340
OKOT01001083
[OKOT] human gut metagenome; human gut
963
1050
+
Ser
GGA
[ENA]
¡û
>WENV182860342
OKOT01001282
[OKOT] human gut metagenome; human gut
978
1054
+
Arg
TCT
[ENA]
¡û
>WENV182860334
OKOT01000115
[OKOT] human gut metagenome; human gut
1379
1452
+
Gly
CCC
[ENA]
¡û
>WENV182860336
OKOT01000209
[OKOT] human gut metagenome; human gut
1559
1634
+
Val
TAC
[ENA]
¡û
>WENV182860333
OKOT01000093
[OKOT] human gut metagenome; human gut
1594
1508
-
Leu
TAA
[ENA]
¡û
>WENV182860337
OKOT01000209
[OKOT] human gut metagenome; human gut
1639
1714
+
Lys
TTT
[ENA]
¡û
>WENV182860332
OKOT01000093
[OKOT] human gut metagenome; human gut
1681
1608
-
Cys
GCA
[ENA]
¡û
>WENV182860331
OKOT01000093
[OKOT] human gut metagenome; human gut
1797
1722
-
Gly
GCC
[ENA]
¡û
>WENV182860335
OKOT01000122
[OKOT] human gut metagenome; human gut
2679
2604
-
Asn
GTT
[ENA]
¡û
>WENV182860329
OKOT01000027
[OKOT] human gut metagenome; human gut
2805
2891
+
Leu
GAG
[ENA]
¡û
>WENV182860330
OKOT01000064
[OKOT] human gut metagenome; human gut
2877
2783
-
SeC
TCA
[ENA]
¡û
>WENV182860328
OKOT01000018
[OKOT] human gut metagenome; human gut
3988
3912
-
Pro
TGG
[ENA]
¡û
>WENV182860327
OKOT01000018
[OKOT] human gut metagenome; human gut
4117
4031
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK