This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OULL] metagenome; soil
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183696672
OULL01000030
[OULL] metagenome; soil
1414
1490
+
Pro
CGG
[ENA]
¡û
>WENV183696671
OULL01000012
[OULL] metagenome; soil
4037
4112
+
His
GTG
[ENA]
¡û
>WENV183696649
OULL01000009
[OULL] metagenome; soil
8274
8349
+
Gly
GCC
[ENA]
¡û
>WENV183696650
OULL01000009
[OULL] metagenome; soil
8439
8513
+
Glu
TTC
[ENA]
¡û
>WENV183696651
OULL01000009
[OULL] metagenome; soil
8521
8606
+
Tyr
GTA
[ENA]
¡û
>WENV183696652
OULL01000009
[OULL] metagenome; soil
8613
8687
+
Gly
TCC
[ENA]
¡û
>WENV183696653
OULL01000009
[OULL] metagenome; soil
8695
8770
+
Phe
GAA
[ENA]
¡û
>WENV183696654
OULL01000009
[OULL] metagenome; soil
9077
9152
+
Gln
TTG
[ENA]
¡û
>WENV183696655
OULL01000009
[OULL] metagenome; soil
9159
9234
+
Ile2
CAT
[ENA]
¡û
>WENV183696656
OULL01000009
[OULL] metagenome; soil
9256
9331
+
His
GTG
[ENA]
¡û
>WENV183696657
OULL01000009
[OULL] metagenome; soil
9344
9419
+
Ile
GAT
[ENA]
¡û
>WENV183696658
OULL01000009
[OULL] metagenome; soil
9427
9502
+
Trp
CCA
[ENA]
¡û
>WENV183696659
OULL01000009
[OULL] metagenome; soil
9618
9693
+
Arg
ACG
[ENA]
¡û
>WENV183696660
OULL01000009
[OULL] metagenome; soil
9700
9774
+
Pro
TGG
[ENA]
¡û
>WENV183696661
OULL01000009
[OULL] metagenome; soil
9840
9927
+
Ser
GCT
[ENA]
¡û
>WENV183696662
OULL01000009
[OULL] metagenome; soil
10017
10091
+
Asp
GTC
[ENA]
¡û
>WENV183696663
OULL01000009
[OULL] metagenome; soil
10111
10186
+
Thr
TGT
[ENA]
¡û
>WENV183696664
OULL01000009
[OULL] metagenome; soil
10197
10280
+
Leu
GAG
[ENA]
¡û
>WENV183696665
OULL01000009
[OULL] metagenome; soil
10392
10469
+
Leu
CAG
[ENA]
¡û
>WENV183696666
OULL01000009
[OULL] metagenome; soil
10565
10653
+
Leu
TAA
[ENA]
¡û
>WENV183696667
OULL01000009
[OULL] metagenome; soil
10801
10877
+
Met
CAT
[ENA]
¡û
>WENV183696668
OULL01000009
[OULL] metagenome; soil
10885
10961
+
Cys
GCA
[ENA]
¡û
>WENV183696669
OULL01000009
[OULL] metagenome; soil
10965
11040
+
Arg
CCG
[ENA]
¡û
>WENV183696670
OULL01000009
[OULL] metagenome; soil
18118
18045
-
Thr
AGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK