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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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HOW TO USE
tRNA gene List
[AJWY] human gut metagenome; lean human gut
HIT:
147 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170004831
AJWY01006293
[AJWY] human gut metagenome; lean human gut
1
75
+
Glu
CTC
[ENA]
¢þ
>WENV170004805
AJWY01003450
[AJWY] human gut metagenome; lean human gut
12
87
+
Pro
TGG
[ENA]
¢þ
>WENV170004802
AJWY01003326
[AJWY] human gut metagenome; lean human gut
27
100
+
Phe
GAA
[ENA]
¢þ
>WENV170004815
AJWY01004138
[AJWY] human gut metagenome; lean human gut
55
128
+
Val
TAC
[ENA]
¢þ
>WENV170004890
AJWY01011760
[AJWY] human gut metagenome; lean human gut
67
144
+
Arg
ACG
[ENA]
¢þ
>WENV170004826
AJWY01005631
[AJWY] human gut metagenome; lean human gut
73
1
-
Glu
TTC
[ENA]
¢þ
>WENV170004856
AJWY01009678
[AJWY] human gut metagenome; lean human gut
75
-1
-
Ile
GAT
[ENA]
¢þ
>WENV170004789
AJWY01002396
[AJWY] human gut metagenome; lean human gut
78
3
-
Val
GAC
[ENA]
¢þ
>WENV170004858
AJWY01009775
[AJWY] human gut metagenome; lean human gut
79
3
-
Asp
GTC
[ENA]
¢þ
>WENV170004863
AJWY01010082
[AJWY] human gut metagenome; lean human gut
88
13
-
Lys
TTT
[ENA]
¢þ
>WENV170004806
AJWY01003450
[AJWY] human gut metagenome; lean human gut
89
159
+
Gly
TCC
[ENA]
¢þ
>WENV170004852
AJWY01008619
[AJWY] human gut metagenome; lean human gut
95
21
-
Arg
CCT
[ENA]
¢þ
>WENV170004828
AJWY01005915
[AJWY] human gut metagenome; lean human gut
97
21
-
Ile
GAT
[ENA]
¢þ
>WENV170004847
AJWY01008249
[AJWY] human gut metagenome; lean human gut
102
29
-
Gln
TTG
[ENA]
¢þ
>WENV170004771
AJWY01000653
[AJWY] human gut metagenome; lean human gut
104
28
-
Ile
GAT
[ENA]
¢þ
>WENV170004900
AJWY01012109
[AJWY] human gut metagenome; lean human gut
120
44
-
Ile
GAT
[ENA]
¢þ
>WENV170004843
AJWY01007565
[AJWY] human gut metagenome; lean human gut
120
194
+
Cys
GCA
[ENA]
¢þ
>WENV170004879
AJWY01011155
[AJWY] human gut metagenome; lean human gut
124
51
-
Phe
GAA
[ENA]
¢þ
>WENV170004911
AJWY01013959
[AJWY] human gut metagenome; lean human gut
131
203
+
Met
CAT
[ENA]
¢þ
>WENV170004865
AJWY01010257
[AJWY] human gut metagenome; lean human gut
136
209
+
Asn
GTT
[ENA]
¢þ
>WENV170004833
AJWY01006899
[AJWY] human gut metagenome; lean human gut
136
213
+
Val
TAC
[ENA]
¢þ
>WENV170004844
AJWY01007799
[AJWY] human gut metagenome; lean human gut
137
212
+
Lys
CTT
[ENA]
¢þ
>WENV170004769
AJWY01000632
[AJWY] human gut metagenome; lean human gut
143
72
-
Gln
TTG
[ENA]
¢þ
>WENV170004912
AJWY01014076
[AJWY] human gut metagenome; lean human gut
145
64
-
Leu
TAG
[ENA]
¢þ
>WENV170004876
AJWY01010750
[AJWY] human gut metagenome; lean human gut
149
73
-
Pro
TGG
[ENA]
¢þ
>WENV170004891
AJWY01011760
[AJWY] human gut metagenome; lean human gut
149
237
+
Ser
TGA
[ENA]
¢þ
>WENV170004816
AJWY01004138
[AJWY] human gut metagenome; lean human gut
150
235
+
Leu
TAA
[ENA]
¢þ
>WENV170004814
AJWY01004128
[AJWY] human gut metagenome; lean human gut
152
77
-
Gly
GCC
[ENA]
¢þ
>WENV170004853
AJWY01008944
[AJWY] human gut metagenome; lean human gut
152
228
+
Val
CAC
[ENA]
¢þ
>WENV170004840
AJWY01007251
[AJWY] human gut metagenome; lean human gut
153
78
-
Val
TAC
[ENA]
¢þ
>WENV170004793
AJWY01002996
[AJWY] human gut metagenome; lean human gut
155
82
-
Thr
CGT
[ENA]
¢þ
>WENV170004888
AJWY01011533
[AJWY] human gut metagenome; lean human gut
157
73
-
Leu
CAA
[ENA]
¢þ
>WENV170004820
AJWY01004700
[AJWY] human gut metagenome; lean human gut
168
80
-
Ser
GGA
[ENA]
¢þ
>WENV170004906
AJWY01013321
[AJWY] human gut metagenome; lean human gut
172
247
+
Pro
TGG
[ENA]
¢þ
>WENV170004767
AJWY01000605
[AJWY] human gut metagenome; lean human gut
188
263
+
Lys
CTT
[ENA]
¢þ
>WENV170004798
AJWY01003270
[AJWY] human gut metagenome; lean human gut
193
118
-
Lys
TTT
[ENA]
¢þ
>WENV170004857
AJWY01009699
[AJWY] human gut metagenome; lean human gut
194
118
-
Arg
CCG
[ENA]
¢þ
>WENV170004784
AJWY01001983
[AJWY] human gut metagenome; lean human gut
195
271
+
Thr
TGT
[ENA]
¢þ
>WENV170004770
AJWY01000653
[AJWY] human gut metagenome; lean human gut
196
121
-
Ala
TGC
[ENA]
¢þ
>WENV170004859
AJWY01009806
[AJWY] human gut metagenome; lean human gut
200
276
+
Arg
TCT
[ENA]
¢þ
>WENV170004803
AJWY01003383
[AJWY] human gut metagenome; lean human gut
202
129
-
Phe
GAA
[ENA]
¢þ
>WENV170004830
AJWY01005929
[AJWY] human gut metagenome; lean human gut
207
133
-
Ala
TGC
[ENA]
¢þ
>WENV170004902
AJWY01012531
[AJWY] human gut metagenome; lean human gut
217
142
-
Thr
CGT
[ENA]
¢þ
>WENV170004835
AJWY01006903
[AJWY] human gut metagenome; lean human gut
217
291
+
Arg
CCT
[ENA]
¢þ
>WENV170004882
AJWY01011265
[AJWY] human gut metagenome; lean human gut
219
146
-
Gln
CTG
[ENA]
¢þ
>WENV170004899
AJWY01012109
[AJWY] human gut metagenome; lean human gut
230
155
-
Ala
TGC
[ENA]
¢þ
>WENV170004866
AJWY01010257
[AJWY] human gut metagenome; lean human gut
237
308
+
Glu
TTC
[ENA]
¢þ
>WENV170004892
AJWY01011760
[AJWY] human gut metagenome; lean human gut
241
312
+
Gln
CTG
[ENA]
¢þ
>WENV170004797
AJWY01003193
[AJWY] human gut metagenome; lean human gut
245
155
-
Ser
GGA
[ENA]
¢þ
>WENV170004776
AJWY01001264
[AJWY] human gut metagenome; lean human gut
245
170
-
Gln
CTG
[ENA]
¢þ
>WENV170004854
AJWY01009268
[AJWY] human gut metagenome; lean human gut
247
323
+
Arg
CCT
[ENA]
¢þ
>WENV170004788
AJWY01002264
[AJWY] human gut metagenome; lean human gut
252
327
+
Ala
GGC
[ENA]
¢þ
>WENV170004824
AJWY01005445
[AJWY] human gut metagenome; lean human gut
253
179
-
Glu
TTC
[ENA]
¢þ
>WENV170004774
AJWY01000882
[AJWY] human gut metagenome; lean human gut
260
333
+
Lys
CTT
[ENA]
¢þ
>WENV170004834
AJWY01006899
[AJWY] human gut metagenome; lean human gut
262
336
+
Val
GAC
[ENA]
¢þ
>WENV170004817
AJWY01004138
[AJWY] human gut metagenome; lean human gut
266
340
+
Arg
ACG
[ENA]
¢þ
>WENV170004782
AJWY01001928
[AJWY] human gut metagenome; lean human gut
271
346
+
Ala
TGC
[ENA]
¢þ
>WENV170004768
AJWY01000605
[AJWY] human gut metagenome; lean human gut
278
353
+
Glu
CTC
[ENA]
¢þ
>WENV170004860
AJWY01009806
[AJWY] human gut metagenome; lean human gut
283
359
+
His
GTG
[ENA]
¢þ
>WENV170004908
AJWY01013427
[AJWY] human gut metagenome; lean human gut
287
210
-
Pro
CGG
[ENA]
¢þ
>WENV170004881
AJWY01011265
[AJWY] human gut metagenome; lean human gut
294
222
-
Cys
GCA
[ENA]
¢þ
>WENV170004810
AJWY01003894
[AJWY] human gut metagenome; lean human gut
308
380
+
Thr
CGT
[ENA]
¢þ
>WENV170004795
AJWY01003122
[AJWY] human gut metagenome; lean human gut
318
391
+
Gln
CTG
[ENA]
¢þ
>WENV170004781
AJWY01001902
[AJWY] human gut metagenome; lean human gut
321
247
-
Ala
TGC
[ENA]
¢þ
>WENV170004893
AJWY01011760
[AJWY] human gut metagenome; lean human gut
321
394
+
Phe
GAA
[ENA]
¢þ
>WENV170004823
AJWY01005445
[AJWY] human gut metagenome; lean human gut
334
258
-
Met
CAT
[ENA]
¢þ
>WENV170004867
AJWY01010257
[AJWY] human gut metagenome; lean human gut
340
414
+
Met
CAT
[ENA]
¢þ
>WENV170004855
AJWY01009678
[AJWY] human gut metagenome; lean human gut
345
270
-
Ala
TGC
[ENA]
¢þ
>WENV170004783
AJWY01001928
[AJWY] human gut metagenome; lean human gut
350
426
+
Ile
GAT
[ENA]
¢þ
>WENV170004827
AJWY01005673
[AJWY] human gut metagenome; lean human gut
351
267
-
Leu
CAA
[ENA]
¢þ
>WENV170004886
AJWY01011483
[AJWY] human gut metagenome; lean human gut
357
282
-
Lys
CTT
[ENA]
¢þ
>WENV170004786
AJWY01002102
[AJWY] human gut metagenome; lean human gut
362
286
-
Ile
GAT
[ENA]
¢þ
>WENV170004861
AJWY01009806
[AJWY] human gut metagenome; lean human gut
363
438
+
Lys
TTT
[ENA]
¢þ
>WENV170004913
AJWY01014307
[AJWY] human gut metagenome; lean human gut
370
445
+
Thr
GGT
[ENA]
¢þ
>WENV170004829
AJWY01005929
[AJWY] human gut metagenome; lean human gut
371
297
-
Ile
GAT
[ENA]
¢þ
>WENV170004870
AJWY01010261
[AJWY] human gut metagenome; lean human gut
386
462
+
Pro
CGG
[ENA]
¢þ
>WENV170004884
AJWY01011416
[AJWY] human gut metagenome; lean human gut
401
311
-
Ser
CGA
[ENA]
¢þ
>WENV170004832
AJWY01006578
[AJWY] human gut metagenome; lean human gut
403
473
+
Gly
CCC
[ENA]
¢þ
>WENV170004894
AJWY01011760
[AJWY] human gut metagenome; lean human gut
403
485
+
Tyr
GTA
[ENA]
¢þ
>WENV170004905
AJWY01013106
[AJWY] human gut metagenome; lean human gut
410
484
+
Thr
CGT
[ENA]
¢þ
>WENV170004841
AJWY01007296
[AJWY] human gut metagenome; lean human gut
413
503
+
Ser
GGA
[ENA]
¢þ
>WENV170004780
AJWY01001902
[AJWY] human gut metagenome; lean human gut
418
342
-
Ile
GAT
[ENA]
¢þ
>WENV170004851
AJWY01008435
[AJWY] human gut metagenome; lean human gut
418
506
+
Ser
TGA
[ENA]
¢þ
>WENV170004796
AJWY01003122
[AJWY] human gut metagenome; lean human gut
421
494
+
Pro
CGG
[ENA]
¢þ
>WENV170004875
AJWY01010577
[AJWY] human gut metagenome; lean human gut
426
502
+
Thr
TGT
[ENA]
¢þ
>WENV170004787
AJWY01002155
[AJWY] human gut metagenome; lean human gut
436
508
+
Glu
CTC
[ENA]
¢þ
>WENV170004887
AJWY01011521
[AJWY] human gut metagenome; lean human gut
437
349
-
Leu
GAG
[ENA]
¢þ
>WENV170004871
AJWY01010433
[AJWY] human gut metagenome; lean human gut
439
355
-
Leu
TAG
[ENA]
¢þ
>WENV170004801
AJWY01003325
[AJWY] human gut metagenome; lean human gut
440
357
-
Tyr
GTA
[ENA]
¢þ
>WENV170004907
AJWY01013427
[AJWY] human gut metagenome; lean human gut
441
364
-
Pro
TGG
[ENA]
¢þ
>WENV170004885
AJWY01011483
[AJWY] human gut metagenome; lean human gut
441
367
-
Glu
CTC
[ENA]
¢þ
>WENV170004883
AJWY01011337
[AJWY] human gut metagenome; lean human gut
446
522
+
Arg
ACG
[ENA]
¢þ
>WENV170004778
AJWY01001274
[AJWY] human gut metagenome; lean human gut
451
376
-
Gly
GCC
[ENA]
¢þ
>WENV170004785
AJWY01002102
[AJWY] human gut metagenome; lean human gut
451
376
-
Ala
TGC
[ENA]
¢þ
>WENV170004825
AJWY01005588
[AJWY] human gut metagenome; lean human gut
452
527
+
Lys
CTT
[ENA]
¢þ
>WENV170004868
AJWY01010257
[AJWY] human gut metagenome; lean human gut
453
529
+
Asp
GTC
[ENA]
¢þ
>WENV170004813
AJWY01004024
[AJWY] human gut metagenome; lean human gut
457
385
-
Tyr
GTA
[ENA]
¢þ
>WENV170004794
AJWY01003041
[AJWY] human gut metagenome; lean human gut
458
533
+
Lys
CTT
[ENA]
¢þ
>WENV170004799
AJWY01003314
[AJWY] human gut metagenome; lean human gut
460
383
-
Val
TAC
[ENA]
¢þ
>WENV170004809
AJWY01003538
[AJWY] human gut metagenome; lean human gut
467
393
-
Glu
CTC
[ENA]
¢þ
>WENV170004889
AJWY01011700
[AJWY] human gut metagenome; lean human gut
471
561
+
Ser
GCT
[ENA]
¢þ
>WENV170004874
AJWY01010524
[AJWY] human gut metagenome; lean human gut
479
391
-
Ser
TGA
[ENA]
¢þ
>WENV170004895
AJWY01011760
[AJWY] human gut metagenome; lean human gut
492
565
+
Gln
TTG
[ENA]
¢þ
>WENV170004837
AJWY01007146
[AJWY] human gut metagenome; lean human gut
493
569
+
Arg
CCG
[ENA]
¢þ
>WENV170004862
AJWY01009806
[AJWY] human gut metagenome; lean human gut
504
578
+
Gln
TTG
[ENA]
¢þ
>WENV170004821
AJWY01005078
[AJWY] human gut metagenome; lean human gut
508
583
+
Met
CAT
[ENA]
¢þ
>WENV170004903
AJWY01012627
[AJWY] human gut metagenome; lean human gut
532
456
-
Pro
CGG
[ENA]
¢þ
>WENV170004777
AJWY01001274
[AJWY] human gut metagenome; lean human gut
536
461
-
Phe
GAA
[ENA]
¢þ
>WENV170004910
AJWY01013502
[AJWY] human gut metagenome; lean human gut
542
467
-
Met
CAT
[ENA]
¢þ
>WENV170004909
AJWY01013499
[AJWY] human gut metagenome; lean human gut
545
619
+
Met
CAT
[ENA]
¢þ
>WENV170004872
AJWY01010483
[AJWY] human gut metagenome; lean human gut
547
474
-
Gln
CTG
[ENA]
¢þ
>WENV170004869
AJWY01010257
[AJWY] human gut metagenome; lean human gut
550
624
+
Val
TAC
[ENA]
¢þ
>WENV170004880
AJWY01011160
[AJWY] human gut metagenome; lean human gut
556
482
-
Met
CAT
[ENA]
¢þ
>WENV170004901
AJWY01012135
[AJWY] human gut metagenome; lean human gut
571
496
-
Ala
CGC
[ENA]
¢þ
>WENV170004898
AJWY01011849
[AJWY] human gut metagenome; lean human gut
573
648
+
Arg
CCT
[ENA]
¢þ
>WENV170004896
AJWY01011760
[AJWY] human gut metagenome; lean human gut
576
647
+
SeC
TCA
[ENA]
¢þ
>WENV170004800
AJWY01003325
[AJWY] human gut metagenome; lean human gut
582
508
-
Thr
TGT
[ENA]
¢þ
>WENV170004836
AJWY01007055
[AJWY] human gut metagenome; lean human gut
585
659
+
Arg
CCT
[ENA]
¢þ
>WENV170004808
AJWY01003538
[AJWY] human gut metagenome; lean human gut
601
526
-
Lys
CTT
[ENA]
¢þ
>WENV170004904
AJWY01013013
[AJWY] human gut metagenome; lean human gut
611
537
-
Arg
TCT
[ENA]
¢þ
>WENV170004873
AJWY01010524
[AJWY] human gut metagenome; lean human gut
619
528
-
Ser
GCT
[ENA]
¢þ
>WENV170004804
AJWY01003409
[AJWY] human gut metagenome; lean human gut
620
534
-
Leu
CAG
[ENA]
¢þ
>WENV170004773
AJWY01000700
[AJWY] human gut metagenome; lean human gut
629
555
-
Glu
CTC
[ENA]
¢þ
>WENV170004812
AJWY01004022
[AJWY] human gut metagenome; lean human gut
645
555
-
Ser
GCT
[ENA]
¢þ
>WENV170004897
AJWY01011760
[AJWY] human gut metagenome; lean human gut
653
727
+
His
GTG
[ENA]
¢þ
>WENV170004807
AJWY01003477
[AJWY] human gut metagenome; lean human gut
666
742
+
Ala
TGC
[ENA]
¢þ
>WENV170004790
AJWY01002535
[AJWY] human gut metagenome; lean human gut
676
763
+
Leu
TAA
[ENA]
¢þ
>WENV170004811
AJWY01003943
[AJWY] human gut metagenome; lean human gut
705
631
-
Ala
TGC
[ENA]
¢þ
>WENV170004878
AJWY01011026
[AJWY] human gut metagenome; lean human gut
708
632
-
Arg
ACG
[ENA]
¢þ
>WENV170004848
AJWY01008265
[AJWY] human gut metagenome; lean human gut
735
648
-
Ser
TGA
[ENA]
¢þ
>WENV170004877
AJWY01010939
[AJWY] human gut metagenome; lean human gut
737
812
+
Arg
CCT
[ENA]
¢þ
>WENV170004772
AJWY01000700
[AJWY] human gut metagenome; lean human gut
755
680
-
Lys
CTT
[ENA]
¢þ
>WENV170004792
AJWY01002859
[AJWY] human gut metagenome; lean human gut
757
685
-
Thr
GGT
[ENA]
¢þ
>WENV170004775
AJWY01001186
[AJWY] human gut metagenome; lean human gut
758
830
+
Asn
GTT
[ENA]
¢þ
>WENV170004819
AJWY01004658
[AJWY] human gut metagenome; lean human gut
817
742
-
Pro
TGG
[ENA]
¢þ
>WENV170004846
AJWY01008172
[AJWY] human gut metagenome; lean human gut
823
747
-
Asp
GTC
[ENA]
¢þ
>WENV170004864
AJWY01010225
[AJWY] human gut metagenome; lean human gut
842
766
-
Asn
GTT
[ENA]
¢þ
>WENV170004845
AJWY01007802
[AJWY] human gut metagenome; lean human gut
859
930
+
Gln
TTG
[ENA]
¢þ
>WENV170004791
AJWY01002737
[AJWY] human gut metagenome; lean human gut
886
975
+
Ser
CGA
[ENA]
¢þ
>WENV170004850
AJWY01008373
[AJWY] human gut metagenome; lean human gut
893
809
-
Leu
GAG
[ENA]
¢þ
>WENV170004849
AJWY01008373
[AJWY] human gut metagenome; lean human gut
999
915
-
Leu
CAG
[ENA]
¢þ
>WENV170004839
AJWY01007246
[AJWY] human gut metagenome; lean human gut
1081
1153
+
Thr
CGT
[ENA]
¢þ
>WENV170004838
AJWY01007164
[AJWY] human gut metagenome; lean human gut
1199
1125
-
Thr
AGT
[ENA]
¢þ
>WENV170004818
AJWY01004428
[AJWY] human gut metagenome; lean human gut
1220
1146
-
Arg
CCT
[ENA]
¢þ
>WENV170004779
AJWY01001670
[AJWY] human gut metagenome; lean human gut
1261
1189
-
Cys
GCA
[ENA]
¢þ
>WENV170004842
AJWY01007523
[AJWY] human gut metagenome; lean human gut
1266
1194
-
Thr
GGT
[ENA]
¢þ
>WENV170004822
AJWY01005353
[AJWY] human gut metagenome; lean human gut
1478
1403
-
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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