This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170008332
ANMQ01002229
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
36
107
+
Asp
GTC
[ENA]
¢þ
>WENV170008337
ANMQ01013747
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
211
284
+
Cys
GCA
[ENA]
¢þ
>WENV170008335
ANMQ01007832
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
246
174
-
Phe
GAA
[ENA]
¢þ
>WENV170008330
ANMQ01000675
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
292
218
-
Arg
TCG
[ENA]
¢þ
>WENV170008338
ANMQ01015885
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
370
444
+
Asn
GTT
[ENA]
¢þ
>WENV170008336
ANMQ01010588
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
405
334
-
Glu
CTC
[ENA]
¢þ
>WENV170008333
ANMQ01006325
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
541
470
-
Glu
CTC
[ENA]
¢þ
>WENV170008334
ANMQ01007386
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
677
606
-
Thr
CGT
[ENA]
¢þ
>WENV170008303
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
734
660
-
Asn
GTT
[ENA]
¢þ
>WENV170008306
ANMQ01000014
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
791
719
-
Glu
TTC
[ENA]
¢þ
>WENV170008327
ANMQ01000154
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
1067
994
-
Lys
TTT
[ENA]
¢þ
>WENV170008320
ANMQ01000116
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
1080
1155
+
Asn
GTT
[ENA]
¢þ
>WENV170008331
ANMQ01001214
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
1413
1337
-
Pro
GGG
[ENA]
¢þ
>WENV170008316
ANMQ01000095
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
2040
1965
-
Met
CAT
[ENA]
¢þ
>WENV170008329
ANMQ01000413
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
2200
2274
+
Ala
TGC
[ENA]
¢þ
>WENV170008321
ANMQ01000125
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
2342
2418
+
Ile
GAT
[ENA]
¢þ
>WENV170008317
ANMQ01000100
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
2374
2447
+
Phe
GAA
[ENA]
¢þ
>WENV170008322
ANMQ01000125
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
2426
2501
+
Ala
TGC
[ENA]
¢þ
>WENV170008312
ANMQ01000042
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
3152
3237
+
Leu
GAG
[ENA]
¢þ
>WENV170008313
ANMQ01000042
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
3308
3385
+
Val
GAC
[ENA]
¢þ
>WENV170008318
ANMQ01000103
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
3929
4002
+
Gly
GCC
[ENA]
¢þ
>WENV170008319
ANMQ01000103
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
4106
4191
+
Leu
TAA
[ENA]
¢þ
>WENV170008328
ANMQ01000203
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
4512
4584
+
Arg
CCT
[ENA]
¢þ
>WENV170008315
ANMQ01000093
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5289
5381
+
Ser
GGA
[ENA]
¢þ
>WENV170008314
ANMQ01000043
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5540
5622
+
Leu
TAA
[ENA]
¢þ
>WENV170008294
ANMQ01000004
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5636
5710
+
Met
CAT
[ENA]
¢þ
>WENV170008302
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5657
5583
-
Arg
ACG
[ENA]
¢þ
>WENV170008326
ANMQ01000143
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5691
5764
+
Thr
TGT
[ENA]
¢þ
>WENV170008323
ANMQ01000134
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5775
5864
+
Ser
GCT
[ENA]
¢þ
>WENV170008324
ANMQ01000134
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
5886
5961
+
Pro
TGG
[ENA]
¢þ
>WENV170008325
ANMQ01000134
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
6070
6143
+
Arg
TCT
[ENA]
¢þ
>WENV170008297
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
6857
6940
+
Tyr
GTA
[ENA]
¢þ
>WENV170008298
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
6963
7036
+
Gly
TCC
[ENA]
¢þ
>WENV170008299
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
7050
7124
+
Thr
GGT
[ENA]
¢þ
>WENV170008291
ANMQ01000001
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
8606
8519
-
Ser
TGA
[ENA]
¢þ
>WENV170008300
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
8655
8728
+
Trp
CCA
[ENA]
¢þ
>WENV170008309
ANMQ01000018
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
9733
9805
+
Gln
TTG
[ENA]
¢þ
>WENV170008305
ANMQ01000012
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
10732
10816
+
Leu
TAG
[ENA]
¢þ
>WENV170008311
ANMQ01000022
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
13563
13487
-
Ala
GGC
[ENA]
¢þ
>WENV170008310
ANMQ01000018
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
14981
14896
-
Ser
CGA
[ENA]
¢þ
>WENV170008307
ANMQ01000017
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
15401
15475
+
Asp
GTC
[ENA]
¢þ
>WENV170008308
ANMQ01000017
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
16284
16210
-
Arg
TCG
[ENA]
¢þ
>WENV170008304
ANMQ01000011
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
17801
17726
-
Pro
TGG
[ENA]
¢þ
>WENV170008301
ANMQ01000007
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
20576
20650
+
Val
TAC
[ENA]
¢þ
>WENV170008290
ANMQ01000001
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
20944
21018
+
His
GTG
[ENA]
¢þ
>WENV170008296
ANMQ01000005
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
23431
23504
+
Met
CAT
[ENA]
¢þ
>WENV170008295
ANMQ01000004
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
24820
24896
+
Ile
GAT
[ENA]
¢þ
>WENV170008292
ANMQ01000003
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
25552
25627
+
Cys
GCA
[ENA]
¢þ
>WENV170008293
ANMQ01000003
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp)
25707
25793
+
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK