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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
HIT:
6 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170012428
ASRJ01001987
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
97
14
-
Tyr
GTA
[ENA]
¢þ
>WENV170012427
ASRJ01001987
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
249
175
-
Thr
TGT
[ENA]
¢þ
>WENV170012425
ASRJ01001636
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
668
742
+
Thr
TGT
[ENA]
¢þ
>WENV170012426
ASRJ01001636
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
820
903
+
Tyr
GTA
[ENA]
¢þ
>WENV170012423
ASRJ01000061
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
4841
4767
-
Asn
GTT
[ENA]
¢þ
>WENV170012424
ASRJ01000105
[ASRJ] food metagenome; kefir grains from a family living in the Northwest region of Turkey and cultivating the kefir
7371
7445
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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