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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
HIT:
247 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170014057
AVFP01004092
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2
76
+
Asp
GTC
[ENA]
¢þ
>WENV170014148
AVFP01022565
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3
91
+
Leu
TAA
[ENA]
¢þ
>WENV170014053
AVFP01003891
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6
81
+
Val
TAC
[ENA]
¢þ
>WENV170014135
AVFP01015364
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
18
94
+
Pro
TGG
[ENA]
¢þ
>WENV170014056
AVFP01003999
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
31
107
+
His
GTG
[ENA]
¢þ
>WENV170014152
AVFP01026991
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
37
111
+
Pro
CGG
[ENA]
¢þ
>WENV170014125
AVFP01013755
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
59
131
+
Thr
GGT
[ENA]
¢þ
>WENV170014043
AVFP01003296
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
62
136
+
Gln
TTG
[ENA]
¢þ
>WENV170014159
AVFP01030934
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
74
149
+
Ala
TGC
[ENA]
¢þ
>WENV170014085
AVFP01005985
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
76
151
+
Lys
TTT
[ENA]
¢þ
>WENV170014133
AVFP01014959
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
78
155
+
Pro
TGG
[ENA]
¢þ
>WENV170014151
AVFP01023764
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
90
1
-
Thr
TGT
[ENA]
¢þ
>WENV170014118
AVFP01011808
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
99
23
-
Asn
GTT
[ENA]
¢þ
>WENV170014147
AVFP01021507
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
114
42
-
Asn
GTT
[ENA]
¢þ
>WENV170014129
AVFP01014251
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
117
191
+
Gln
TTG
[ENA]
¢þ
>WENV170014027
AVFP01002331
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
119
45
-
Phe
GAA
[ENA]
¢þ
>WENV170014121
AVFP01012678
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
122
37
-
Leu
TAG
[ENA]
¢þ
>WENV170014078
AVFP01005672
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
124
38
-
Leu
GAG
[ENA]
¢þ
>WENV170014153
AVFP01027164
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
158
83
-
Thr
CGT
[ENA]
¢þ
>WENV170014149
AVFP01023069
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
169
243
+
Gly
CCC
[ENA]
¢þ
>WENV170013988
AVFP01001233
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
177
101
-
Arg
TCT
[ENA]
¢þ
>WENV170014106
AVFP01008407
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
182
106
-
Arg
TCT
[ENA]
¢þ
>WENV170014143
AVFP01017859
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
185
99
-
Leu
CAG
[ENA]
¢þ
>WENV170014158
AVFP01029418
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
187
101
-
Leu
TAG
[ENA]
¢þ
>WENV170014157
AVFP01029204
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
191
116
-
Gly
TCC
[ENA]
¢þ
>WENV170014141
AVFP01016696
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
192
118
-
Thr
GGT
[ENA]
¢þ
>WENV170014026
AVFP01002331
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
207
133
-
Ile
GAT
[ENA]
¢þ
>WENV170014127
AVFP01013828
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
215
141
-
Phe
GAA
[ENA]
¢þ
>WENV170014134
AVFP01014959
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
223
297
+
Arg
TCT
[ENA]
¢þ
>WENV170014006
AVFP01001516
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
238
163
-
Thr
TGT
[ENA]
¢þ
>WENV170014155
AVFP01027532
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
238
326
+
Leu
TAA
[ENA]
¢þ
>WENV170014154
AVFP01027417
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
239
327
+
Leu
TAA
[ENA]
¢þ
>WENV170014122
AVFP01012809
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
252
163
-
Ser
GCT
[ENA]
¢þ
>WENV170014061
AVFP01004649
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
254
167
-
Ser
TGA
[ENA]
¢þ
>WENV170014145
AVFP01019454
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
262
336
+
Glu
TTC
[ENA]
¢þ
>WENV170014096
AVFP01007621
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
273
347
+
Val
TAC
[ENA]
¢þ
>WENV170014150
AVFP01023459
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
275
202
-
Glu
TTC
[ENA]
¢þ
>WENV170013983
AVFP01001028
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
281
207
-
Asn
GTT
[ENA]
¢þ
>WENV170014138
AVFP01016189
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
284
212
-
Arg
CCT
[ENA]
¢þ
>WENV170013993
AVFP01001315
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
286
201
-
Leu
TAA
[ENA]
¢þ
>WENV170014137
AVFP01015853
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
297
211
-
Leu
GAG
[ENA]
¢þ
>WENV170014128
AVFP01014040
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
304
380
+
Arg
CCT
[ENA]
¢þ
>WENV170014080
AVFP01005721
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
308
397
+
Ser
GGA
[ENA]
¢þ
>WENV170014126
AVFP01013755
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
311
384
+
Trp
CCA
[ENA]
¢þ
>WENV170014100
AVFP01007771
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
312
238
-
Gly
GCC
[ENA]
¢þ
>WENV170014140
AVFP01016680
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
315
240
-
Gly
TCC
[ENA]
¢þ
>WENV170014073
AVFP01005657
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
316
391
+
Thr
TGT
[ENA]
¢þ
>WENV170014156
AVFP01028694
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
318
245
-
Gly
TCC
[ENA]
¢þ
>WENV170014115
AVFP01010255
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
326
411
+
Leu
TAA
[ENA]
¢þ
>WENV170014136
AVFP01015452
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
337
262
-
Val
GAC
[ENA]
¢þ
>WENV170014060
AVFP01004598
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
342
266
-
Asp
GTC
[ENA]
¢þ
>WENV170014097
AVFP01007622
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
344
420
+
Met
CAT
[ENA]
¢þ
>WENV170014014
AVFP01001728
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
346
271
-
Val
GAC
[ENA]
¢þ
>WENV170014091
AVFP01006652
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
347
273
-
Gly
CCC
[ENA]
¢þ
>WENV170014131
AVFP01014557
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
348
424
+
Met
CAT
[ENA]
¢þ
>WENV170014103
AVFP01008194
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
352
441
+
Ser
GGA
[ENA]
¢þ
>WENV170014117
AVFP01011488
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
353
278
-
Met
CAT
[ENA]
¢þ
>WENV170014123
AVFP01013178
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
353
428
+
Trp
CCA
[ENA]
¢þ
>WENV170014077
AVFP01005670
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
355
279
-
Arg
CCG
[ENA]
¢þ
>WENV170014144
AVFP01019011
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
357
283
-
Arg
TCG
[ENA]
¢þ
>WENV170013927
AVFP01000083
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
369
445
+
Trp
CCA
[ENA]
¢þ
>WENV170014099
AVFP01007766
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
374
298
-
Arg
CCT
[ENA]
¢þ
>WENV170014146
AVFP01019454
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
374
446
+
Glu
TTC
[ENA]
¢þ
>WENV170014072
AVFP01005567
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
382
305
-
Pro
GGG
[ENA]
¢þ
>WENV170014065
AVFP01004732
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
383
295
-
Ser
TGA
[ENA]
¢þ
>WENV170014124
AVFP01013625
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
385
471
+
Leu
CAA
[ENA]
¢þ
>WENV170014142
AVFP01017244
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
391
481
+
Ser
GCT
[ENA]
¢þ
>WENV170014105
AVFP01008347
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
403
488
+
Ser
GGA
[ENA]
¢þ
>WENV170014055
AVFP01003992
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
409
485
+
Met
CAT
[ENA]
¢þ
>WENV170014120
AVFP01012640
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
418
493
+
Met
CAT
[ENA]
¢þ
>WENV170014139
AVFP01016680
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
421
338
-
Tyr
GTA
[ENA]
¢þ
>WENV170014109
AVFP01008665
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
423
347
-
Arg
CCG
[ENA]
¢þ
>WENV170014102
AVFP01008103
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
435
509
+
Met
CAT
[ENA]
¢þ
>WENV170014089
AVFP01006633
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
452
538
+
Ser
GCT
[ENA]
¢þ
>WENV170014054
AVFP01003891
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
453
529
+
Asp
GTC
[ENA]
¢þ
>WENV170014013
AVFP01001728
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
456
379
-
Val
TAC
[ENA]
¢þ
>WENV170014108
AVFP01008503
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
460
533
+
Cys
GCA
[ENA]
¢þ
>WENV170014086
AVFP01006341
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
480
555
+
Val
TAC
[ENA]
¢þ
>WENV170014116
AVFP01011167
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
506
589
+
Tyr
GTA
[ENA]
¢þ
>WENV170014130
AVFP01014530
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
507
421
-
Leu
CAG
[ENA]
¢þ
>WENV170014007
AVFP01001555
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
507
431
-
Met
CAT
[ENA]
¢þ
>WENV170014069
AVFP01005270
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
529
441
-
Leu
TAA
[ENA]
¢þ
>WENV170014132
AVFP01014763
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
556
483
-
Met
CAT
[ENA]
¢þ
>WENV170014024
AVFP01002211
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
562
637
+
Gly
GCC
[ENA]
¢þ
>WENV170014064
AVFP01004724
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
576
649
+
Pro
GGG
[ENA]
¢þ
>WENV170014074
AVFP01005657
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
579
663
+
Tyr
GTA
[ENA]
¢þ
>WENV170014111
AVFP01008909
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
579
664
+
Leu
CAG
[ENA]
¢þ
>WENV170014112
AVFP01009202
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
631
706
+
Ala
GGC
[ENA]
¢þ
>WENV170014110
AVFP01008843
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
634
558
-
Asp
GTC
[ENA]
¢þ
>WENV170014000
AVFP01001412
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
639
564
-
Trp
CCA
[ENA]
¢þ
>WENV170014119
AVFP01011933
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
642
565
-
Pro
GGG
[ENA]
¢þ
>WENV170014084
AVFP01005882
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
660
584
-
Met
CAT
[ENA]
¢þ
>WENV170014090
AVFP01006633
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
666
743
+
Pro
TGG
[ENA]
¢þ
>WENV170014025
AVFP01002211
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
677
763
+
Leu
TAA
[ENA]
¢þ
>WENV170014101
AVFP01007994
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
677
764
+
Leu
CAA
[ENA]
¢þ
>WENV170014075
AVFP01005657
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
680
755
+
Gly
TCC
[ENA]
¢þ
>WENV170014079
AVFP01005693
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
709
795
+
Leu
CAG
[ENA]
¢þ
>WENV170014098
AVFP01007679
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
720
795
+
Lys
TTT
[ENA]
¢þ
>WENV170013972
AVFP01000780
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
735
659
-
Arg
CCT
[ENA]
¢þ
>WENV170013958
AVFP01000429
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
736
650
-
Leu
CAG
[ENA]
¢þ
>WENV170014113
AVFP01009202
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
736
811
+
Ala
CGC
[ENA]
¢þ
>WENV170014068
AVFP01005270
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
737
664
-
Gly
GCC
[ENA]
¢þ
>WENV170014114
AVFP01009222
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
742
668
-
Asn
GTT
[ENA]
¢þ
>WENV170014083
AVFP01005870
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
747
672
-
Ala
GGC
[ENA]
¢þ
>WENV170014107
AVFP01008478
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
751
677
-
Gly
GCC
[ENA]
¢þ
>WENV170014052
AVFP01003813
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
765
689
-
Pro
CGG
[ENA]
¢þ
>WENV170014094
AVFP01006903
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
772
857
+
Leu
TAA
[ENA]
¢þ
>WENV170014076
AVFP01005657
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
777
852
+
Thr
GGT
[ENA]
¢þ
>WENV170014104
AVFP01008219
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
780
704
-
Met
CAT
[ENA]
¢þ
>WENV170014034
AVFP01002891
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
791
865
+
Gly
GCC
[ENA]
¢þ
>WENV170014046
AVFP01003501
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
824
749
-
Thr
TGT
[ENA]
¢þ
>WENV170014088
AVFP01006561
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
841
770
-
Gly
TCC
[ENA]
¢þ
>WENV170014071
AVFP01005536
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
852
778
-
Ala
GGC
[ENA]
¢þ
>WENV170014082
AVFP01005863
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
867
792
-
Arg
CCG
[ENA]
¢þ
>WENV170014048
AVFP01003721
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
874
950
+
Met
CAT
[ENA]
¢þ
>WENV170014035
AVFP01002891
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
876
961
+
Leu
TAA
[ENA]
¢þ
>WENV170014020
AVFP01002127
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
882
958
+
Ile
GAT
[ENA]
¢þ
>WENV170014002
AVFP01001422
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
894
818
-
Met
CAT
[ENA]
¢þ
>WENV170014051
AVFP01003813
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
917
991
+
Gln
TTG
[ENA]
¢þ
>WENV170014092
AVFP01006766
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
927
852
-
Arg
ACG
[ENA]
¢þ
>WENV170014087
AVFP01006561
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
927
852
-
Trp
CCA
[ENA]
¢þ
>WENV170014093
AVFP01006899
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
929
1015
+
Leu
TAA
[ENA]
¢þ
>WENV170014037
AVFP01003100
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
930
1006
+
Asp
GTC
[ENA]
¢þ
>WENV170014095
AVFP01007462
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
933
859
-
Asn
GTT
[ENA]
¢þ
>WENV170014066
AVFP01004904
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
943
854
-
Ser
CGA
[ENA]
¢þ
>WENV170014032
AVFP01002557
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
962
1036
+
Thr
GGT
[ENA]
¢þ
>WENV170014049
AVFP01003721
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
965
1050
+
Tyr
GTA
[ENA]
¢þ
>WENV170014021
AVFP01002127
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
970
1045
+
Ala
TGC
[ENA]
¢þ
>WENV170014045
AVFP01003455
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
974
1048
+
Thr
TGT
[ENA]
¢þ
>WENV170014004
AVFP01001490
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
988
1064
+
Ile
GAT
[ENA]
¢þ
>WENV170014041
AVFP01003273
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1030
945
-
Leu
GAG
[ENA]
¢þ
>WENV170014067
AVFP01005035
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1038
1111
+
Gln
TTG
[ENA]
¢þ
>WENV170013971
AVFP01000780
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1052
976
-
Pro
CGG
[ENA]
¢þ
>WENV170014063
AVFP01004707
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1052
1136
+
Leu
TAG
[ENA]
¢þ
>WENV170014050
AVFP01003721
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1077
1150
+
Arg
TCT
[ENA]
¢þ
>WENV170014005
AVFP01001490
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1089
1164
+
Ala
TGC
[ENA]
¢þ
>WENV170014019
AVFP01001973
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1121
1206
+
Leu
CAA
[ENA]
¢þ
>WENV170014039
AVFP01003125
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1152
1077
-
Phe
GAA
[ENA]
¢þ
>WENV170014070
AVFP01005383
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1154
1078
-
Ala
TGC
[ENA]
¢þ
>WENV170013949
AVFP01000256
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1159
1247
+
Leu
GAG
[ENA]
¢þ
>WENV170014062
AVFP01004677
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1164
1088
-
Arg
TCT
[ENA]
¢þ
>WENV170014081
AVFP01005750
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1165
1091
-
Glu
TTC
[ENA]
¢þ
>WENV170014031
AVFP01002467
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1212
1139
-
Gly
TCC
[ENA]
¢þ
>WENV170013982
AVFP01001019
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1230
1155
-
Ala
GGC
[ENA]
¢þ
>WENV170013950
AVFP01000256
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1249
1331
+
Leu
CAG
[ENA]
¢þ
>WENV170014008
AVFP01001573
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1252
1326
+
Val
CAC
[ENA]
¢þ
>WENV170013939
AVFP01000156
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1254
1179
-
Glu
TTC
[ENA]
¢þ
>WENV170014036
AVFP01003088
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1257
1182
-
Ala
CGC
[ENA]
¢þ
>WENV170014038
AVFP01003100
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1285
1359
+
Arg
CCT
[ENA]
¢þ
>WENV170014040
AVFP01003136
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1298
1209
-
Ser
GCT
[ENA]
¢þ
>WENV170014033
AVFP01002786
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1300
1374
+
Glu
TTC
[ENA]
¢þ
>WENV170014023
AVFP01002165
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1338
1412
+
Val
CAC
[ENA]
¢þ
>WENV170014044
AVFP01003425
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1424
1498
+
Met
CAT
[ENA]
¢þ
>WENV170014028
AVFP01002402
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1425
1500
+
Gly
GCC
[ENA]
¢þ
>WENV170014047
AVFP01003588
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1435
1511
+
Met
CAT
[ENA]
¢þ
>WENV170014030
AVFP01002467
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1443
1358
-
Tyr
GTA
[ENA]
¢þ
>WENV170013973
AVFP01000829
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1564
1653
+
Ser
CGA
[ENA]
¢þ
>WENV170013938
AVFP01000156
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1632
1557
-
Ala
GGC
[ENA]
¢þ
>WENV170013955
AVFP01000370
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1670
1586
-
Leu
TAA
[ENA]
¢þ
>WENV170014042
AVFP01003277
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1779
1706
-
Gly
TCC
[ENA]
¢þ
>WENV170013987
AVFP01001224
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1786
1857
+
Cys
GCA
[ENA]
¢þ
>WENV170013953
AVFP01000326
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1787
1862
+
Gly
CCC
[ENA]
¢þ
>WENV170014058
AVFP01004244
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1800
1876
+
Ile
GAT
[ENA]
¢þ
>WENV170014029
AVFP01002434
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1803
1879
+
Arg
CCG
[ENA]
¢þ
>WENV170013995
AVFP01001407
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1807
1733
-
Met
CAT
[ENA]
¢þ
>WENV170013970
AVFP01000730
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1813
1738
-
Asn
GTT
[ENA]
¢þ
>WENV170013954
AVFP01000370
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1878
1805
-
Cys
GCA
[ENA]
¢þ
>WENV170013978
AVFP01000948
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1928
2018
+
Ser
GGA
[ENA]
¢þ
>WENV170014059
AVFP01004244
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1935
2010
+
Ala
TGC
[ENA]
¢þ
>WENV170013999
AVFP01001412
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2024
1950
-
Thr
GGT
[ENA]
¢þ
>WENV170014010
AVFP01001670
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2058
1983
-
Glu
TTC
[ENA]
¢þ
>WENV170013979
AVFP01001007
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2120
2194
+
Ile
GAT
[ENA]
¢þ
>WENV170013998
AVFP01001412
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2176
2101
-
Gly
TCC
[ENA]
¢þ
>WENV170014001
AVFP01001422
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2189
2265
+
Pro
GGG
[ENA]
¢þ
>WENV170014015
AVFP01001827
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2210
2294
+
Leu
TAG
[ENA]
¢þ
>WENV170014017
AVFP01001855
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2232
2306
+
Ala
GGC
[ENA]
¢þ
>WENV170013997
AVFP01001412
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2272
2189
-
Tyr
GTA
[ENA]
¢þ
>WENV170013980
AVFP01001007
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2309
2385
+
Ala
TGC
[ENA]
¢þ
>WENV170014018
AVFP01001855
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2312
2386
+
Arg
CCT
[ENA]
¢þ
>WENV170014009
AVFP01001663
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2313
2387
+
Val
GAC
[ENA]
¢þ
>WENV170014022
AVFP01002145
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2329
2252
-
Pro
GGG
[ENA]
¢þ
>WENV170013996
AVFP01001412
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2373
2299
-
Thr
TGT
[ENA]
¢þ
>WENV170013937
AVFP01000119
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2474
2388
-
Leu
CAG
[ENA]
¢þ
>WENV170013994
AVFP01001321
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2527
2602
+
Lys
TTT
[ENA]
¢þ
>WENV170013989
AVFP01001277
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2529
2605
+
Ile
GAT
[ENA]
¢þ
>WENV170013985
AVFP01001150
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2558
2634
+
His
GTG
[ENA]
¢þ
>WENV170014003
AVFP01001487
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2605
2694
+
Ser
CGA
[ENA]
¢þ
>WENV170013990
AVFP01001277
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2618
2693
+
Ala
TGC
[ENA]
¢þ
>WENV170013966
AVFP01000603
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2709
2794
+
Ser
TGA
[ENA]
¢þ
>WENV170014016
AVFP01001849
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2721
2648
-
Cys
GCA
[ENA]
¢þ
>WENV170014011
AVFP01001715
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2752
2826
+
Val
GAC
[ENA]
¢þ
>WENV170013967
AVFP01000603
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2806
2898
+
Ser
GCT
[ENA]
¢þ
>WENV170014012
AVFP01001717
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2818
2894
+
Met
CAT
[ENA]
¢þ
>WENV170013986
AVFP01001169
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
2896
2822
-
Thr
CGT
[ENA]
¢þ
>WENV170013992
AVFP01001295
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3062
3138
+
Arg
ACG
[ENA]
¢þ
>WENV170013959
AVFP01000479
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3343
3420
+
Val
TAC
[ENA]
¢þ
>WENV170013984
AVFP01001121
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3356
3267
-
Ser
GCT
[ENA]
¢þ
>WENV170013960
AVFP01000479
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3451
3526
+
Val
GAC
[ENA]
¢þ
>WENV170013981
AVFP01001017
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3455
3531
+
Pro
CGG
[ENA]
¢þ
>WENV170013991
AVFP01001289
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3462
3387
-
Trp
CCA
[ENA]
¢þ
>WENV170013947
AVFP01000215
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3518
3445
-
Gly
CCC
[ENA]
¢þ
>WENV170013942
AVFP01000181
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3723
3798
+
Glu
CTC
[ENA]
¢þ
>WENV170013951
AVFP01000259
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
3736
3661
-
Ala
CGC
[ENA]
¢þ
>WENV170013976
AVFP01000861
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4006
3930
-
Gln
TTG
[ENA]
¢þ
>WENV170013940
AVFP01000159
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4173
4248
+
Val
TAC
[ENA]
¢þ
>WENV170013941
AVFP01000159
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4264
4340
+
Asp
GTC
[ENA]
¢þ
>WENV170013957
AVFP01000407
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4379
4454
+
Thr
CGT
[ENA]
¢þ
>WENV170013977
AVFP01000912
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4383
4457
+
Arg
TCG
[ENA]
¢þ
>WENV170013934
AVFP01000105
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4607
4521
-
Leu
CAA
[ENA]
¢þ
>WENV170013974
AVFP01000853
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4672
4748
+
Pro
GGG
[ENA]
¢þ
>WENV170013975
AVFP01000859
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
4925
4848
-
Pro
TGG
[ENA]
¢þ
>WENV170013962
AVFP01000552
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5539
5623
+
Tyr
GTA
[ENA]
¢þ
>WENV170013969
AVFP01000603
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5641
5564
-
Glu
TTC
[ENA]
¢þ
>WENV170013968
AVFP01000603
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5727
5652
-
Lys
TTT
[ENA]
¢þ
>WENV170013963
AVFP01000552
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5732
5805
+
Gly
TCC
[ENA]
¢þ
>WENV170013931
AVFP01000087
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5736
5661
-
Lys
CTT
[ENA]
¢þ
>WENV170013965
AVFP01000595
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5868
5794
-
Phe
GAA
[ENA]
¢þ
>WENV170013930
AVFP01000087
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
5871
5796
-
His
GTG
[ENA]
¢þ
>WENV170013929
AVFP01000087
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6081
6005
-
Arg
TCT
[ENA]
¢þ
>WENV170013961
AVFP01000482
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6132
6222
+
Ser
GCT
[ENA]
¢þ
>WENV170013964
AVFP01000552
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6240
6315
+
Thr
GGT
[ENA]
¢þ
>WENV170013952
AVFP01000325
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6299
6375
+
Met
CAT
[ENA]
¢þ
>WENV170013928
AVFP01000087
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6314
6238
-
Pro
TGG
[ENA]
¢þ
>WENV170013918
AVFP01000016
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6586
6662
+
Pro
CGG
[ENA]
¢þ
>WENV170013919
AVFP01000033
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
6643
6568
-
Asn
GTT
[ENA]
¢þ
>WENV170013956
AVFP01000393
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
7137
7051
-
Leu
CAA
[ENA]
¢þ
>WENV170013945
AVFP01000212
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
8502
8426
-
Pro
GGG
[ENA]
¢þ
>WENV170013948
AVFP01000245
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
9082
9172
+
Ser
GGA
[ENA]
¢þ
>WENV170013946
AVFP01000213
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
9462
9378
-
Leu
GAG
[ENA]
¢þ
>WENV170013923
AVFP01000047
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
9709
9784
+
Phe
GAA
[ENA]
¢þ
>WENV170013915
AVFP01000003
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
10205
10281
+
His
GTG
[ENA]
¢þ
>WENV170013936
AVFP01000116
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
11610
11535
-
Cys
GCA
[ENA]
¢þ
>WENV170013943
AVFP01000189
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
11820
11895
+
Thr
CGT
[ENA]
¢þ
>WENV170013932
AVFP01000088
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
11860
11935
+
Arg
CCT
[ENA]
¢þ
>WENV170013925
AVFP01000063
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
12843
12770
-
Gln
CTG
[ENA]
¢þ
>WENV170013935
AVFP01000113
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
12956
12880
-
Arg
TCG
[ENA]
¢þ
>WENV170013933
AVFP01000093
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
14475
14565
+
Ser
TGA
[ENA]
¢þ
>WENV170013944
AVFP01000212
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
15341
15265
-
Val
GAC
[ENA]
¢þ
>WENV170013926
AVFP01000077
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
15728
15802
+
Glu
CTC
[ENA]
¢þ
>WENV170013922
AVFP01000042
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
17446
17520
+
Gly
GCC
[ENA]
¢þ
>WENV170013920
AVFP01000038
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
18085
18160
+
Met
CAT
[ENA]
¢þ
>WENV170013924
AVFP01000053
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
18151
18226
+
Phe
GAA
[ENA]
¢þ
>WENV170013916
AVFP01000012
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
24021
24096
+
Gln
TTG
[ENA]
¢þ
>WENV170013921
AVFP01000041
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
25726
25802
+
Arg
ACG
[ENA]
¢þ
>WENV170013917
AVFP01000015
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
27508
27582
+
Gln
TTG
[ENA]
¢þ
>WENV170013913
AVFP01000001
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
31878
31975
+
SeC(p)
TCA
[ENA]
¢þ
>WENV170013914
AVFP01000001
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
53002
53087
+
Leu
GAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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