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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[CWGY] human gut metagenome; ENVO:feces
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170540313
CWGY01000050
[CWGY] human gut metagenome; ENVO:feces
1
74
+
Cys
GCA
[ENA]
¢þ
>WENV170540314
CWGY01000050
[CWGY] human gut metagenome; ENVO:feces
307
382
+
Gly
GCC
[ENA]
¢þ
>WENV170540294
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
7966
7890
-
Pro
GGG
[ENA]
¢þ
>WENV170540304
CWGY01000035
[CWGY] human gut metagenome; ENVO:feces
10636
10711
+
Arg
CCT
[ENA]
¢þ
>WENV170540264
CWGY01000001
[CWGY] human gut metagenome; ENVO:feces
10917
10842
-
Thr
CGT
[ENA]
¢þ
>WENV170540269
CWGY01000007
[CWGY] human gut metagenome; ENVO:feces
11517
11441
-
Pro
CGG
[ENA]
¢þ
>WENV170540301
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
12003
11927
-
Glu
CTC
[ENA]
¢þ
>WENV170540300
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
12130
12054
-
Glu
CTC
[ENA]
¢þ
>WENV170540299
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
12229
12156
-
Gln
CTG
[ENA]
¢þ
>WENV170540302
CWGY01000030
[CWGY] human gut metagenome; ENVO:feces
12625
12699
+
Val
GAC
[ENA]
¢þ
>WENV170540303
CWGY01000030
[CWGY] human gut metagenome; ENVO:feces
13796
13870
+
Val
GAC
[ENA]
¢þ
>WENV170540268
CWGY01000007
[CWGY] human gut metagenome; ENVO:feces
18461
18387
-
Val
TAC
[ENA]
¢þ
>WENV170540305
CWGY01000035
[CWGY] human gut metagenome; ENVO:feces
21363
21449
+
Leu
CAG
[ENA]
¢þ
>WENV170540267
CWGY01000007
[CWGY] human gut metagenome; ENVO:feces
28590
28507
-
Leu
TAA
[ENA]
¢þ
>WENV170540312
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
28636
28561
-
Lys
TTT
[ENA]
¢þ
>WENV170540266
CWGY01000007
[CWGY] human gut metagenome; ENVO:feces
28799
28725
-
Glu
TTC
[ENA]
¢þ
>WENV170540311
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
30384
30310
-
Gly
CCC
[ENA]
¢þ
>WENV170540306
CWGY01000041
[CWGY] human gut metagenome; ENVO:feces
31926
32002
+
Met
CAT
[ENA]
¢þ
>WENV170540281
CWGY01000017
[CWGY] human gut metagenome; ENVO:feces
31946
31872
-
Gln
TTG
[ENA]
¢þ
>WENV170540293
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
34161
34087
-
Val
CAC
[ENA]
¢þ
>WENV170540282
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
36804
36879
+
Ala
GGC
[ENA]
¢þ
>WENV170540292
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
45399
45324
-
Met
CAT
[ENA]
¢þ
>WENV170540291
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
45516
45441
-
Ala
GGC
[ENA]
¢þ
>WENV170540270
CWGY01000008
[CWGY] human gut metagenome; ENVO:feces
47270
47344
+
Thr
TGT
[ENA]
¢þ
>WENV170540271
CWGY01000008
[CWGY] human gut metagenome; ENVO:feces
47780
47863
+
Tyr
GTA
[ENA]
¢þ
>WENV170540272
CWGY01000008
[CWGY] human gut metagenome; ENVO:feces
47865
47940
+
Thr
GGT
[ENA]
¢þ
>WENV170540273
CWGY01000008
[CWGY] human gut metagenome; ENVO:feces
47950
48026
+
Met
CAT
[ENA]
¢þ
>WENV170540274
CWGY01000008
[CWGY] human gut metagenome; ENVO:feces
49758
49833
+
Trp
CCA
[ENA]
¢þ
>WENV170540280
CWGY01000013
[CWGY] human gut metagenome; ENVO:feces
49788
49712
-
Asp
GTC
[ENA]
¢þ
>WENV170540307
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
65143
65219
+
Ile
GAT
[ENA]
¢þ
>WENV170540308
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
65436
65511
+
Ala
TGC
[ENA]
¢þ
>WENV170540309
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
68691
68781
+
Ser
GGA
[ENA]
¢þ
>WENV170540310
CWGY01000046
[CWGY] human gut metagenome; ENVO:feces
68825
68915
+
Ser
CGA
[ENA]
¢þ
>WENV170540275
CWGY01000010
[CWGY] human gut metagenome; ENVO:feces
70053
70127
+
Asn
GTT
[ENA]
¢þ
>WENV170540276
CWGY01000010
[CWGY] human gut metagenome; ENVO:feces
70160
70234
+
Asn
GTT
[ENA]
¢þ
>WENV170540265
CWGY01000003
[CWGY] human gut metagenome; ENVO:feces
87130
87205
+
Phe
GAA
[ENA]
¢þ
>WENV170540283
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
97208
97284
+
Arg
CCG
[ENA]
¢þ
>WENV170540279
CWGY01000013
[CWGY] human gut metagenome; ENVO:feces
117163
117087
-
Arg
ACG
[ENA]
¢þ
>WENV170540277
CWGY01000013
[CWGY] human gut metagenome; ENVO:feces
117348
117438
+
Ser
GCT
[ENA]
¢þ
>WENV170540298
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
121914
121841
-
Cys
GCA
[ENA]
¢þ
>WENV170540297
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
122030
121955
-
Gly
GCC
[ENA]
¢þ
>WENV170540296
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
124719
124644
-
Gly
GCC
[ENA]
¢þ
>WENV170540295
CWGY01000028
[CWGY] human gut metagenome; ENVO:feces
128335
128245
-
Leu
GAG
[ENA]
¢þ
>WENV170540278
CWGY01000013
[CWGY] human gut metagenome; ENVO:feces
154260
154350
+
Ser
TGA
[ENA]
¢þ
>WENV170540284
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
176092
176178
+
Leu
TAG
[ENA]
¢þ
>WENV170540285
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
180860
180936
+
Pro
TGG
[ENA]
¢þ
>WENV170540286
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
180941
181014
+
Gly
TCC
[ENA]
¢þ
>WENV170540290
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
187474
187398
-
Arg
TCT
[ENA]
¢þ
>WENV170540287
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
187768
187843
+
Lys
CTT
[ENA]
¢þ
>WENV170540289
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
204266
204191
-
Ala
CGC
[ENA]
¢þ
>WENV170540288
CWGY01000027
[CWGY] human gut metagenome; ENVO:feces
212787
212872
+
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK