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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[CZKV] soil metagenome genome assembly CiPEHR-AK-2010-FBin.26, contig:; soil
HIT:
4 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170564692
CZKV01000031
[CZKV] soil metagenome genome assembly CiPEHR-AK-2010-FBin.26, contig:; soil
50
126
+
Asp
GTC
[ENA]
¢þ
>WENV170564691
CZKV01000012
[CZKV] soil metagenome genome assembly CiPEHR-AK-2010-FBin.26, contig:; soil
86
160
+
His
GTG
[ENA]
¢þ
>WENV170564694
CZKV01000052
[CZKV] soil metagenome genome assembly CiPEHR-AK-2010-FBin.26, contig:; soil
545
472
-
Gln
CTG
[ENA]
¢þ
>WENV170564693
CZKV01000035
[CZKV] soil metagenome genome assembly CiPEHR-AK-2010-FBin.26, contig:; soil
9592
9504
-
Ser
GGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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