This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FBSC] gut metagenome; gut
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170565397
FBSC01000071
[FBSC] gut metagenome; gut
35
110
+
Asn
GTT
[ENA]
¢þ
>WENV170565399
FBSC01000163
[FBSC] gut metagenome; gut
106
30
-
Arg
TCT
[ENA]
¢þ
>WENV170565398
FBSC01000081
[FBSC] gut metagenome; gut
233
309
+
Pro
CGG
[ENA]
¢þ
>WENV170565402
FBSC01000175
[FBSC] gut metagenome; gut
259
183
-
Arg
TCT
[ENA]
¢þ
>WENV170565395
FBSC01000048
[FBSC] gut metagenome; gut
304
386
+
Tyr
GTA
[ENA]
¢þ
>WENV170565396
FBSC01000053
[FBSC] gut metagenome; gut
317
242
-
Ala
GGC
[ENA]
¢þ
>WENV170565401
FBSC01000175
[FBSC] gut metagenome; gut
349
273
-
Arg
TCG
[ENA]
¢þ
>WENV170565400
FBSC01000175
[FBSC] gut metagenome; gut
432
357
-
Met
CAT
[ENA]
¢þ
>WENV170565403
FBSC01000176
[FBSC] gut metagenome; gut
1673
1749
+
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK