Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[FJVZ] metagenome; soil

HIT: 67 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV170565603	FJVZ01000926	[FJVZ] metagenome; soil		3	78	+	Ala	GGC	[ENA]	◯
	>WENV170565582	FJVZ01000647	[FJVZ] metagenome; soil		31	103	+	Val	GAC	[ENA]	◯
	>WENV170565601	FJVZ01000873	[FJVZ] metagenome; soil		92	18	-	Lys	CTT	[ENA]	◯
	>WENV170565626	FJVZ01001339	[FJVZ] metagenome; soil		218	296	+	Ala	CGC	[ENA]	◯
	>WENV170565591	FJVZ01000753	[FJVZ] metagenome; soil		240	168	-	Arg	CCG	[ENA]	◯
	>WENV170565610	FJVZ01001055	[FJVZ] metagenome; soil		242	318	+	Met	CAT	[ENA]	◯
	>WENV170565631	FJVZ01001483	[FJVZ] metagenome; soil		323	395	+	Val	TAC	[ENA]	◯
	>WENV170565602	FJVZ01000875	[FJVZ] metagenome; soil		370	444	+	Lys	CTT	[ENA]	◯
	>WENV170565628	FJVZ01001451	[FJVZ] metagenome; soil		510	588	+	Ala	CGC	[ENA]	◯
	>WENV170565616	FJVZ01001184	[FJVZ] metagenome; soil		534	607	+	Arg	TCT	[ENA]	◯
	>WENV170565613	FJVZ01001072	[FJVZ] metagenome; soil		985	911	-	Met	CAT	[ENA]	◯
	>WENV170565608	FJVZ01001013	[FJVZ] metagenome; soil		1281	1369	+	Ser	TGA	[ENA]	◯
	>WENV170565569	FJVZ01000239	[FJVZ] metagenome; soil		1398	1326	-	Arg	CCG	[ENA]	◯
	>WENV170565621	FJVZ01001231	[FJVZ] metagenome; soil		1485	1411	-	Thr	CGT	[ENA]	◯
	>WENV170565581	FJVZ01000645	[FJVZ] metagenome; soil		1591	1665	+	Cys	GCA	[ENA]	◯
	>WENV170565570	FJVZ01000321	[FJVZ] metagenome; soil		1600	1525	-	Thr	GGT	[ENA]	◯
	>WENV170565617	FJVZ01001202	[FJVZ] metagenome; soil		1740	1814	+	Gly	GCC	[ENA]	◯
	>WENV170565618	FJVZ01001202	[FJVZ] metagenome; soil		1852	1925	+	Cys	GCA	[ENA]	◯
	>WENV170565578	FJVZ01000484	[FJVZ] metagenome; soil		1864	1938	+	Lys	CTT	[ENA]	◯
	>WENV170565597	FJVZ01000851	[FJVZ] metagenome; soil		1888	1981	+	Ser	GCT	[ENA]	◯
	>WENV170565619	FJVZ01001202	[FJVZ] metagenome; soil		1958	2030	+	Val	GAC	[ENA]	◯
	>WENV170565620	FJVZ01001202	[FJVZ] metagenome; soil		2070	2142	+	Val	GAC	[ENA]	◯
	>WENV170565598	FJVZ01000851	[FJVZ] metagenome; soil		2131	2204	+	Arg	ACG	[ENA]	◯
	>WENV170565627	FJVZ01001414	[FJVZ] metagenome; soil		2135	2222	+	Leu	GAG	[ENA]	◯
	>WENV170565592	FJVZ01000774	[FJVZ] metagenome; soil		2311	2237	-	Met	CAT	[ENA]	◯
	>WENV170565599	FJVZ01000851	[FJVZ] metagenome; soil		2338	2413	+	Arg	ACG	[ENA]	◯
	>WENV170565614	FJVZ01001089	[FJVZ] metagenome; soil		2435	2524	+	Ser	CGA	[ENA]	◯
	>WENV170565583	FJVZ01000650	[FJVZ] metagenome; soil		2485	2569	+	Tyr	GTA	[ENA]	◯
	>WENV170565594	FJVZ01000827	[FJVZ] metagenome; soil		2497	2423	-	Met	CAT	[ENA]	◯
	>WENV170565630	FJVZ01001475	[FJVZ] metagenome; soil		2521	2595	+	Thr	CGT	[ENA]	◯
	>WENV170565575	FJVZ01000463	[FJVZ] metagenome; soil		2539	2612	+	Glu	TTC	[ENA]	◯
	>WENV170565576	FJVZ01000463	[FJVZ] metagenome; soil		2669	2743	+	Asp	GTC	[ENA]	◯
	>WENV170565632	FJVZ01001504	[FJVZ] metagenome; soil		2703	2779	+	Pro	CGG	[ENA]	◯
	>WENV170565577	FJVZ01000463	[FJVZ] metagenome; soil		2770	2844	+	Phe	GAA	[ENA]	◯
	>WENV170565604	FJVZ01000926	[FJVZ] metagenome; soil		2787	2860	+	Ala	GGC	[ENA]	◯
	>WENV170565588	FJVZ01000692	[FJVZ] metagenome; soil		2792	2865	+	Ala	GGC	[ENA]	◯
	>WENV170565589	FJVZ01000692	[FJVZ] metagenome; soil		2902	2975	+	Ala	GGC	[ENA]	◯
	>WENV170565612	FJVZ01001072	[FJVZ] metagenome; soil		3140	3067	-	Asn	GTT	[ENA]	◯
	>WENV170565611	FJVZ01001072	[FJVZ] metagenome; soil		3273	3200	-	Asn	GTT	[ENA]	◯
	>WENV170565609	FJVZ01001044	[FJVZ] metagenome; soil		3454	3380	-	Pro	GGG	[ENA]	◯
	>WENV170565568	FJVZ01000197	[FJVZ] metagenome; soil		3475	3401	-	Val	CAC	[ENA]	◯
	>WENV170565573	FJVZ01000389	[FJVZ] metagenome; soil		3556	3629	+	Gly	GCC	[ENA]	◯
	>WENV170565574	FJVZ01000389	[FJVZ] metagenome; soil		3676	3751	+	Gly	GCC	[ENA]	◯
	>WENV170565567	FJVZ01000197	[FJVZ] metagenome; soil		3759	3685	-	Val	CAC	[ENA]	◯
	>WENV170565593	FJVZ01000816	[FJVZ] metagenome; soil		3762	3837	+	His	GTG	[ENA]	◯
	>WENV170565596	FJVZ01000834	[FJVZ] metagenome; soil		3972	3898	-	Met	CAT	[ENA]	◯
	>WENV170565629	FJVZ01001454	[FJVZ] metagenome; soil		4326	4410	+	Tyr	GTA	[ENA]	◯
	>WENV170565600	FJVZ01000857	[FJVZ] metagenome; soil		4672	4746	+	Pro	GGG	[ENA]	◯
	>WENV170565625	FJVZ01001315	[FJVZ] metagenome; soil		4961	4876	-	Leu	GAG	[ENA]	◯
	>WENV170565566	FJVZ01000087	[FJVZ] metagenome; soil		5184	5261	+	Trp	CCA	[ENA]	◯
	>WENV170565607	FJVZ01000992	[FJVZ] metagenome; soil		5399	5313	-	Leu	CAG	[ENA]	◯
	>WENV170565624	FJVZ01001284	[FJVZ] metagenome; soil		6101	6027	-	Pro	TGG	[ENA]	◯
	>WENV170565623	FJVZ01001284	[FJVZ] metagenome; soil		6264	6335	+	Gly	TCC	[ENA]	◯
	>WENV170565590	FJVZ01000733	[FJVZ] metagenome; soil		6525	6452	-	Arg	CCT	[ENA]	◯
	>WENV170565622	FJVZ01001264	[FJVZ] metagenome; soil		7212	7299	+	Ser	GGA	[ENA]	◯
	>WENV170565615	FJVZ01001116	[FJVZ] metagenome; soil		7444	7518	+	Met	CAT	[ENA]	◯
	>WENV170565580	FJVZ01000644	[FJVZ] metagenome; soil		7450	7375	-	Gln	TTG	[ENA]	◯
	>WENV170565584	FJVZ01000650	[FJVZ] metagenome; soil		7646	7719	+	Thr	GGT	[ENA]	◯
	>WENV170565585	FJVZ01000650	[FJVZ] metagenome; soil		7760	7836	+	Met	CAT	[ENA]	◯
	>WENV170565606	FJVZ01000948	[FJVZ] metagenome; soil		7909	7836	-	Ala	TGC	[ENA]	◯
	>WENV170565571	FJVZ01000337	[FJVZ] metagenome; soil		8273	8347	+	Thr	TGT	[ENA]	◯
	>WENV170565595	FJVZ01000829	[FJVZ] metagenome; soil		9057	9131	+	Leu	CAA	[ENA]	◯
	>WENV170565605	FJVZ01000948	[FJVZ] metagenome; soil		9104	9028	-	Ile	GAT	[ENA]	◯
	>WENV170565587	FJVZ01000652	[FJVZ] metagenome; soil		11647	11571	-	Asp	GTC	[ENA]	◯
	>WENV170565579	FJVZ01000495	[FJVZ] metagenome; soil		13210	13283	+	Arg	TCT	[ENA]	◯
	>WENV170565586	FJVZ01000650	[FJVZ] metagenome; soil		14974	15047	+	Trp	CCA	[ENA]	◯
	>WENV170565572	FJVZ01000344	[FJVZ] metagenome; soil		21194	21265	+	Gly	CCC	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK