This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FLRP] metagenome; saliva
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180003945
FLRP01051367
[FLRP] metagenome; saliva
1
72
+
Gln
TTG
[ENA]
¢þ
>WENV180003897
FLRP01022446
[FLRP] metagenome; saliva
1
72
+
Cys
GCA
[ENA]
¢þ
>WENV180003906
FLRP01029670
[FLRP] metagenome; saliva
1
76
+
Glu
TTC
[ENA]
¢þ
>WENV180003903
FLRP01027264
[FLRP] metagenome; saliva
1
76
+
Val
TAC
[ENA]
¢þ
>WENV180003949
FLRP01053306
[FLRP] metagenome; saliva
3
77
+
Ala
TGC
[ENA]
¢þ
>WENV180003899
FLRP01025468
[FLRP] metagenome; saliva
4
78
+
Asp
GTC
[ENA]
¢þ
>WENV180003871
FLRP01006795
[FLRP] metagenome; saliva
6
82
+
Asp
GTC
[ENA]
¢þ
>WENV180003867
FLRP01004548
[FLRP] metagenome; saliva
6
96
+
Ser
GGA
[ENA]
¢þ
>WENV180003898
FLRP01024896
[FLRP] metagenome; saliva
11
86
+
Arg
CCG
[ENA]
¢þ
>WENV180003879
FLRP01011225
[FLRP] metagenome; saliva
15
87
+
Gln
CTG
[ENA]
¢þ
>WENV180003883
FLRP01013060
[FLRP] metagenome; saliva
15
88
+
Ala
GGC
[ENA]
¢þ
>WENV180003864
FLRP01003743
[FLRP] metagenome; saliva
20
96
+
Pro
CGG
[ENA]
¢þ
>WENV180003928
FLRP01040003
[FLRP] metagenome; saliva
45
120
+
Thr
CGT
[ENA]
¢þ
>WENV180003925
FLRP01037386
[FLRP] metagenome; saliva
51
126
+
Thr
GGT
[ENA]
¢þ
>WENV180003944
FLRP01050229
[FLRP] metagenome; saliva
52
126
+
Trp
CCA
[ENA]
¢þ
>WENV180003902
FLRP01027124
[FLRP] metagenome; saliva
52
127
+
Val
GAC
[ENA]
¢þ
>WENV180003924
FLRP01036834
[FLRP] metagenome; saliva
52
134
+
Leu
TAG
[ENA]
¢þ
>WENV180003910
FLRP01031037
[FLRP] metagenome; saliva
53
124
+
Gln
CTG
[ENA]
¢þ
>WENV180003894
FLRP01020546
[FLRP] metagenome; saliva
59
145
+
Leu
TAA
[ENA]
¢þ
>WENV180003913
FLRP01033548
[FLRP] metagenome; saliva
59
152
+
Ser
TGA
[ENA]
¢þ
>WENV180003920
FLRP01036562
[FLRP] metagenome; saliva
61
134
+
Trp
CCA
[ENA]
¢þ
>WENV180003921
FLRP01036708
[FLRP] metagenome; saliva
65
151
+
Leu
CAG
[ENA]
¢þ
>WENV180003838
FLRP01000053
[FLRP] metagenome; saliva
66
142
+
Asp
GTC
[ENA]
¢þ
>WENV180003927
FLRP01038861
[FLRP] metagenome; saliva
67
142
+
His
GTG
[ENA]
¢þ
>WENV180003863
FLRP01003494
[FLRP] metagenome; saliva
72
162
+
Ser
GGA
[ENA]
¢þ
>WENV180003958
FLRP01063789
[FLRP] metagenome; saliva
74
1
-
Glu
TTC
[ENA]
¢þ
>WENV180003869
FLRP01005438
[FLRP] metagenome; saliva
74
1
-
Ala
TGC
[ENA]
¢þ
>WENV180003861
FLRP01003267
[FLRP] metagenome; saliva
75
167
+
Ser
GCT
[ENA]
¢þ
>WENV180003857
FLRP01002769
[FLRP] metagenome; saliva
77
2
-
Asn
GTT
[ENA]
¢þ
>WENV180003892
FLRP01018919
[FLRP] metagenome; saliva
78
2
-
Arg
TCT
[ENA]
¢þ
>WENV180003932
FLRP01041565
[FLRP] metagenome; saliva
78
153
+
Lys
TTT
[ENA]
¢þ
>WENV180003900
FLRP01026168
[FLRP] metagenome; saliva
79
152
+
Cys
GCA
[ENA]
¢þ
>WENV180003888
FLRP01014917
[FLRP] metagenome; saliva
86
15
-
Cys
GCA
[ENA]
¢þ
>WENV180003959
FLRP01064529
[FLRP] metagenome; saliva
88
3
-
Leu
GAG
[ENA]
¢þ
>WENV180003878
FLRP01010906
[FLRP] metagenome; saliva
88
165
+
Phe
GAA
[ENA]
¢þ
>WENV180003955
FLRP01056856
[FLRP] metagenome; saliva
89
6
-
Leu
TAG
[ENA]
¢þ
>WENV180003885
FLRP01013609
[FLRP] metagenome; saliva
89
15
-
fMet
CAT
[ENA]
¢þ
>WENV180003884
FLRP01013077
[FLRP] metagenome; saliva
90
19
-
Gly
CCC
[ENA]
¢þ
>WENV180003872
FLRP01007497
[FLRP] metagenome; saliva
90
174
+
Tyr
GTA
[ENA]
¢þ
>WENV180003858
FLRP01003054
[FLRP] metagenome; saliva
93
1
-
Ser
GCT
[ENA]
¢þ
>WENV180003870
FLRP01006572
[FLRP] metagenome; saliva
93
3
-
Ser
TGA
[ENA]
¢þ
>WENV180003916
FLRP01034544
[FLRP] metagenome; saliva
93
7
-
Leu
TAA
[ENA]
¢þ
>WENV180003845
FLRP01000858
[FLRP] metagenome; saliva
94
19
-
Ala
GGC
[ENA]
¢þ
>WENV180003914
FLRP01034354
[FLRP] metagenome; saliva
98
174
+
Met
CAT
[ENA]
¢þ
>WENV180003953
FLRP01055603
[FLRP] metagenome; saliva
107
19
-
Leu
TAA
[ENA]
¢þ
>WENV180003880
FLRP01011225
[FLRP] metagenome; saliva
114
187
+
Glu
CTC
[ENA]
¢þ
>WENV180003887
FLRP01014605
[FLRP] metagenome; saliva
114
199
+
Leu
CAA
[ENA]
¢þ
>WENV180003846
FLRP01000870
[FLRP] metagenome; saliva
114
202
+
Ser
TGA
[ENA]
¢þ
>WENV180003854
FLRP01001876
[FLRP] metagenome; saliva
117
45
-
Gln
CTG
[ENA]
¢þ
>WENV180003904
FLRP01027264
[FLRP] metagenome; saliva
124
199
+
Val
TAC
[ENA]
¢þ
>WENV180003939
FLRP01042915
[FLRP] metagenome; saliva
127
38
-
Ser
TGA
[ENA]
¢þ
>WENV180003896
FLRP01021380
[FLRP] metagenome; saliva
127
51
-
Val
GAC
[ENA]
¢þ
>WENV180003893
FLRP01020286
[FLRP] metagenome; saliva
130
204
+
Arg
CCT
[ENA]
¢þ
>WENV180003877
FLRP01009125
[FLRP] metagenome; saliva
131
42
-
Ser
GGA
[ENA]
¢þ
>WENV180003942
FLRP01046370
[FLRP] metagenome; saliva
132
45
-
Ser
GCT
[ENA]
¢þ
>WENV180003926
FLRP01037386
[FLRP] metagenome; saliva
132
208
+
Met
CAT
[ENA]
¢þ
>WENV180003930
FLRP01040200
[FLRP] metagenome; saliva
134
60
-
Cys
GCA
[ENA]
¢þ
>WENV180003895
FLRP01020638
[FLRP] metagenome; saliva
139
55
-
Tyr
GTA
[ENA]
¢þ
>WENV180003912
FLRP01032875
[FLRP] metagenome; saliva
141
68
-
Arg
CCG
[ENA]
¢þ
>WENV180003909
FLRP01030731
[FLRP] metagenome; saliva
143
60
-
Leu
CAA
[ENA]
¢þ
>WENV180003917
FLRP01035054
[FLRP] metagenome; saliva
144
69
-
Arg
CCG
[ENA]
¢þ
>WENV180003851
FLRP01001603
[FLRP] metagenome; saliva
148
73
-
Glu
TTC
[ENA]
¢þ
>WENV180003890
FLRP01018580
[FLRP] metagenome; saliva
149
75
-
Arg
CCG
[ENA]
¢þ
>WENV180003839
FLRP01000053
[FLRP] metagenome; saliva
158
233
+
Trp
CCA
[ENA]
¢þ
>WENV180003957
FLRP01060394
[FLRP] metagenome; saliva
159
86
-
Gly
TCC
[ENA]
¢þ
>WENV180003931
FLRP01040389
[FLRP] metagenome; saliva
166
72
-
SeC
TCA
[ENA]
¢þ
>WENV180003860
FLRP01003160
[FLRP] metagenome; saliva
174
101
-
Lys
CTT
[ENA]
¢þ
>WENV180003915
FLRP01034354
[FLRP] metagenome; saliva
181
256
+
Ala
GGC
[ENA]
¢þ
>WENV180003901
FLRP01026168
[FLRP] metagenome; saliva
181
267
+
Leu
TAA
[ENA]
¢þ
>WENV180003891
FLRP01018919
[FLRP] metagenome; saliva
183
106
-
Pro
TGG
[ENA]
¢þ
>WENV180003922
FLRP01036708
[FLRP] metagenome; saliva
191
277
+
Leu
CAG
[ENA]
¢þ
>WENV180003866
FLRP01004457
[FLRP] metagenome; saliva
195
268
+
Asn
GTT
[ENA]
¢þ
>WENV180003886
FLRP01013649
[FLRP] metagenome; saliva
196
281
+
Leu
GAG
[ENA]
¢þ
>WENV180003905
FLRP01027584
[FLRP] metagenome; saliva
200
129
-
Ser
TGA
[ENA]
¢þ
>WENV180003956
FLRP01059768
[FLRP] metagenome; saliva
211
282
+
Glu
TTC
[ENA]
¢þ
>WENV180003938
FLRP01042915
[FLRP] metagenome; saliva
213
140
-
Ile2
CAT
[ENA]
¢þ
>WENV180003873
FLRP01007497
[FLRP] metagenome; saliva
216
290
+
Gly
TCC
[ENA]
¢þ
>WENV180003954
FLRP01055844
[FLRP] metagenome; saliva
217
293
+
Asp
GTC
[ENA]
¢þ
>WENV180003933
FLRP01041644
[FLRP] metagenome; saliva
238
331
+
Ser
GCT
[ENA]
¢þ
>WENV180003929
FLRP01040173
[FLRP] metagenome; saliva
242
170
-
Thr
CGT
[ENA]
¢þ
>WENV180003943
FLRP01049797
[FLRP] metagenome; saliva
243
167
-
Val
GAC
[ENA]
¢þ
>WENV180003881
FLRP01011377
[FLRP] metagenome; saliva
277
202
-
Asn
GTT
[ENA]
¢þ
>WENV180003868
FLRP01005438
[FLRP] metagenome; saliva
292
218
-
Ile
GAT
[ENA]
¢þ
>WENV180003841
FLRP01000472
[FLRP] metagenome; saliva
292
365
+
Glu
TTC
[ENA]
¢þ
>WENV180003874
FLRP01007497
[FLRP] metagenome; saliva
294
369
+
Thr
GGT
[ENA]
¢þ
>WENV180003862
FLRP01003343
[FLRP] metagenome; saliva
298
223
-
Ile2
CAT
[ENA]
¢þ
>WENV180003937
FLRP01042915
[FLRP] metagenome; saliva
301
226
-
Met
CAT
[ENA]
¢þ
>WENV180003847
FLRP01001132
[FLRP] metagenome; saliva
305
379
+
Thr
TGT
[ENA]
¢þ
>WENV180003934
FLRP01041644
[FLRP] metagenome; saliva
355
431
+
Arg
ACG
[ENA]
¢þ
>WENV180003889
FLRP01017458
[FLRP] metagenome; saliva
364
274
-
Ser
TGA
[ENA]
¢þ
>WENV180003842
FLRP01000472
[FLRP] metagenome; saliva
367
442
+
Met
CAT
[ENA]
¢þ
>WENV180003876
FLRP01007852
[FLRP] metagenome; saliva
369
294
-
Ala
TGC
[ENA]
¢þ
>WENV180003923
FLRP01036708
[FLRP] metagenome; saliva
372
462
+
Ser
GGA
[ENA]
¢þ
>WENV180003936
FLRP01042915
[FLRP] metagenome; saliva
379
306
-
Pro
TGG
[ENA]
¢þ
>WENV180003882
FLRP01013004
[FLRP] metagenome; saliva
409
333
-
fMet
CAT
[ENA]
¢þ
>WENV180003840
FLRP01000156
[FLRP] metagenome; saliva
418
493
+
Trp
CCA
[ENA]
¢þ
>WENV180003950
FLRP01053348
[FLRP] metagenome; saliva
435
360
-
Phe
GAA
[ENA]
¢þ
>WENV180003935
FLRP01041644
[FLRP] metagenome; saliva
485
561
+
Arg
ACG
[ENA]
¢þ
>WENV180003855
FLRP01001985
[FLRP] metagenome; saliva
492
417
-
Lys
TTT
[ENA]
¢þ
>WENV180003875
FLRP01007852
[FLRP] metagenome; saliva
499
423
-
Ile
GAT
[ENA]
¢þ
>WENV180003848
FLRP01001562
[FLRP] metagenome; saliva
525
601
+
Met
CAT
[ENA]
¢þ
>WENV180003852
FLRP01001635
[FLRP] metagenome; saliva
552
626
+
Ile
GAT
[ENA]
¢þ
>WENV180003918
FLRP01035154
[FLRP] metagenome; saliva
580
656
+
Arg
CCG
[ENA]
¢þ
>WENV180003843
FLRP01000608
[FLRP] metagenome; saliva
602
677
+
Val
TAC
[ENA]
¢þ
>WENV180003849
FLRP01001562
[FLRP] metagenome; saliva
607
691
+
Leu
TAG
[ENA]
¢þ
>WENV180003853
FLRP01001635
[FLRP] metagenome; saliva
627
701
+
Ala
TGC
[ENA]
¢þ
>WENV180003859
FLRP01003103
[FLRP] metagenome; saliva
653
728
+
Thr
TGT
[ENA]
¢þ
>WENV180003919
FLRP01035154
[FLRP] metagenome; saliva
687
762
+
His
GTG
[ENA]
¢þ
>WENV180003850
FLRP01001562
[FLRP] metagenome; saliva
719
793
+
Gln
TTG
[ENA]
¢þ
>WENV180003865
FLRP01004125
[FLRP] metagenome; saliva
727
638
-
Leu
TAA
[ENA]
¢þ
>WENV180003908
FLRP01029769
[FLRP] metagenome; saliva
768
693
-
Lys
CTT
[ENA]
¢þ
>WENV180003907
FLRP01029769
[FLRP] metagenome; saliva
874
799
-
Lys
TTT
[ENA]
¢þ
>WENV180003946
FLRP01052486
[FLRP] metagenome; saliva
897
980
+
Tyr
GTA
[ENA]
¢þ
>WENV180003856
FLRP01002019
[FLRP] metagenome; saliva
995
906
-
Ser
TGA
[ENA]
¢þ
>WENV180003947
FLRP01052486
[FLRP] metagenome; saliva
1017
1090
+
Gly
TCC
[ENA]
¢þ
>WENV180003948
FLRP01052486
[FLRP] metagenome; saliva
1102
1176
+
Thr
GGT
[ENA]
¢þ
>WENV180003911
FLRP01031089
[FLRP] metagenome; saliva
1308
1233
-
Asn
GTT
[ENA]
¢þ
>WENV180003951
FLRP01054580
[FLRP] metagenome; saliva
1496
1572
+
Pro
TGG
[ENA]
¢þ
>WENV180003952
FLRP01054580
[FLRP] metagenome; saliva
1625
1701
+
Arg
TCT
[ENA]
¢þ
>WENV180003844
FLRP01000858
[FLRP] metagenome; saliva
1790
1865
+
Val
TAC
[ENA]
¢þ
>WENV180003941
FLRP01046310
[FLRP] metagenome; saliva
3504
3429
-
Ala
TGC
[ENA]
¢þ
>WENV180003940
FLRP01046310
[FLRP] metagenome; saliva
3586
3510
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK