This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FLZO] jellyfish metagenome; jellyfish
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170575477
FLZO01000031
[FLZO] jellyfish metagenome; jellyfish
844
770
-
Arg
TCG
[ENA]
¢þ
>WENV170575476
FLZO01000029
[FLZO] jellyfish metagenome; jellyfish
3088
3002
-
Leu
GAG
[ENA]
¢þ
>WENV170575469
FLZO01000016
[FLZO] jellyfish metagenome; jellyfish
6346
6419
+
His
GTG
[ENA]
¢þ
>WENV170575474
FLZO01000018
[FLZO] jellyfish metagenome; jellyfish
6481
6410
-
Gly
GCC
[ENA]
¢þ
>WENV170575475
FLZO01000019
[FLZO] jellyfish metagenome; jellyfish
7764
7835
+
Gln
TTG
[ENA]
¢þ
>WENV170575452
FLZO01000003
[FLZO] jellyfish metagenome; jellyfish
9821
9746
-
Met
CAT
[ENA]
¢þ
>WENV170575472
FLZO01000017
[FLZO] jellyfish metagenome; jellyfish
11133
11059
-
Lys
TTT
[ENA]
¢þ
>WENV170575471
FLZO01000017
[FLZO] jellyfish metagenome; jellyfish
11210
11136
-
Glu
TTC
[ENA]
¢þ
>WENV170575470
FLZO01000017
[FLZO] jellyfish metagenome; jellyfish
14358
14288
-
Gly
TCC
[ENA]
¢þ
>WENV170575473
FLZO01000018
[FLZO] jellyfish metagenome; jellyfish
22385
22460
+
Arg
TCT
[ENA]
¢þ
>WENV170575448
FLZO01000003
[FLZO] jellyfish metagenome; jellyfish
25301
25374
+
Thr
GGT
[ENA]
¢þ
>WENV170575449
FLZO01000003
[FLZO] jellyfish metagenome; jellyfish
26690
26764
+
Trp
CCA
[ENA]
¢þ
>WENV170575456
FLZO01000005
[FLZO] jellyfish metagenome; jellyfish
33666
33742
+
Pro
GGG
[ENA]
¢þ
>WENV170575447
FLZO01000002
[FLZO] jellyfish metagenome; jellyfish
41971
41887
-
Leu
TAA
[ENA]
¢þ
>WENV170575458
FLZO01000005
[FLZO] jellyfish metagenome; jellyfish
42069
41995
-
Ala
GGC
[ENA]
¢þ
>WENV170575466
FLZO01000010
[FLZO] jellyfish metagenome; jellyfish
43492
43411
-
Tyr
GTA
[ENA]
¢þ
>WENV170575465
FLZO01000010
[FLZO] jellyfish metagenome; jellyfish
43642
43568
-
Thr
TGT
[ENA]
¢þ
>WENV170575467
FLZO01000012
[FLZO] jellyfish metagenome; jellyfish
46775
46705
-
Cys
GCA
[ENA]
¢þ
>WENV170575463
FLZO01000010
[FLZO] jellyfish metagenome; jellyfish
50837
50911
+
Val
TAC
[ENA]
¢þ
>WENV170575464
FLZO01000010
[FLZO] jellyfish metagenome; jellyfish
50920
50995
+
Asp
GTC
[ENA]
¢þ
>WENV170575468
FLZO01000014
[FLZO] jellyfish metagenome; jellyfish
51084
51169
+
Leu
CAA
[ENA]
¢þ
>WENV170575443
FLZO01000001
[FLZO] jellyfish metagenome; jellyfish
64870
64943
+
Phe
GAA
[ENA]
¢þ
>WENV170575455
FLZO01000004
[FLZO] jellyfish metagenome; jellyfish
76625
76552
-
Asn
GTT
[ENA]
¢þ
>WENV170575444
FLZO01000001
[FLZO] jellyfish metagenome; jellyfish
85815
85904
+
Ser
GGA
[ENA]
¢þ
>WENV170575457
FLZO01000005
[FLZO] jellyfish metagenome; jellyfish
99803
99716
-
Ser
GCT
[ENA]
¢þ
>WENV170575459
FLZO01000006
[FLZO] jellyfish metagenome; jellyfish
104835
104918
+
Leu
TAG
[ENA]
¢þ
>WENV170575462
FLZO01000006
[FLZO] jellyfish metagenome; jellyfish
110065
109989
-
Pro
TGG
[ENA]
¢þ
>WENV170575450
FLZO01000003
[FLZO] jellyfish metagenome; jellyfish
118368
118443
+
Val
GAC
[ENA]
¢þ
>WENV170575451
FLZO01000003
[FLZO] jellyfish metagenome; jellyfish
125852
125936
+
Ser
TGA
[ENA]
¢þ
>WENV170575460
FLZO01000006
[FLZO] jellyfish metagenome; jellyfish
126915
126989
+
Met
CAT
[ENA]
¢þ
>WENV170575461
FLZO01000006
[FLZO] jellyfish metagenome; jellyfish
127004
127077
+
Met
CAT
[ENA]
¢þ
>WENV170575454
FLZO01000004
[FLZO] jellyfish metagenome; jellyfish
146464
146390
-
Ile
GAT
[ENA]
¢þ
>WENV170575453
FLZO01000004
[FLZO] jellyfish metagenome; jellyfish
146544
146469
-
Ala
TGC
[ENA]
¢þ
>WENV170575446
FLZO01000002
[FLZO] jellyfish metagenome; jellyfish
154315
154241
-
Arg
ACG
[ENA]
¢þ
>WENV170575445
FLZO01000001
[FLZO] jellyfish metagenome; jellyfish
229113
229039
-
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK