This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSTJ] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180015814
FSTJ01000058
[FSTJ] metagenome; soil
10
86
+
Ala
CGC
[ENA]
¢þ
>WENV180015810
FSTJ01000010
[FSTJ] metagenome; soil
11
99
+
Ser
CGA
[ENA]
¢þ
>WENV180015816
FSTJ01000248
[FSTJ] metagenome; soil
110
38
-
Val
GAC
[ENA]
¢þ
>WENV180015812
FSTJ01000037
[FSTJ] metagenome; soil
147
62
-
Tyr
GTA
[ENA]
¢þ
>WENV180015811
FSTJ01000037
[FSTJ] metagenome; soil
275
201
-
Thr
TGT
[ENA]
¢þ
>WENV180015809
FSTJ01000009
[FSTJ] metagenome; soil
445
358
-
Leu
TAA
[ENA]
¢þ
>WENV180015817
FSTJ01000397
[FSTJ] metagenome; soil
449
362
-
Ser
TGA
[ENA]
¢þ
>WENV180015813
FSTJ01000056
[FSTJ] metagenome; soil
1998
1924
-
Arg
CCG
[ENA]
¢þ
>WENV180015815
FSTJ01000106
[FSTJ] metagenome; soil
4056
3969
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK