This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSTN] metagenome; soil
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180015862
FSTN01000200
[FSTN] metagenome; soil
7
81
+
Arg
CCT
[ENA]
¢þ
>WENV180015857
FSTN01000012
[FSTN] metagenome; soil
79
154
+
Thr
TGT
[ENA]
¢þ
>WENV180015861
FSTN01000170
[FSTN] metagenome; soil
646
721
+
Asn
GTT
[ENA]
¢þ
>WENV180015865
FSTN01000296
[FSTN] metagenome; soil
1550
1636
+
Leu
TAA
[ENA]
¢þ
>WENV180015856
FSTN01000010
[FSTN] metagenome; soil
1569
1644
+
His
GTG
[ENA]
¢þ
>WENV180015858
FSTN01000101
[FSTN] metagenome; soil
1642
1718
+
fMet
CAT
[ENA]
¢þ
>WENV180015864
FSTN01000270
[FSTN] metagenome; soil
2441
2366
-
Thr
TGT
[ENA]
¢þ
>WENV180015859
FSTN01000104
[FSTN] metagenome; soil
2579
2655
+
Arg
TCT
[ENA]
¢þ
>WENV180015866
FSTN01000298
[FSTN] metagenome; soil
3044
3128
+
Leu
GAG
[ENA]
¢þ
>WENV180015860
FSTN01000134
[FSTN] metagenome; soil
3178
3104
-
Thr
GGT
[ENA]
¢þ
>WENV180015863
FSTN01000262
[FSTN] metagenome; soil
6978
6889
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK