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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FSUH] metagenome; soil
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180016254
FSUH01000169
[FSUH] metagenome; soil
877
951
+
Cys
GCA
[ENA]
¢þ
>WENV180016249
FSUH01000092
[FSUH] metagenome; soil
1040
957
-
Leu
CAA
[ENA]
¢þ
>WENV180016245
FSUH01000001
[FSUH] metagenome; soil
1578
1654
+
Arg
CCG
[ENA]
¢þ
>WENV180016247
FSUH01000066
[FSUH] metagenome; soil
2636
2561
-
Ala
GGC
[ENA]
¢þ
>WENV180016255
FSUH01000181
[FSUH] metagenome; soil
2742
2658
-
Leu
GAG
[ENA]
¢þ
>WENV180016250
FSUH01000110
[FSUH] metagenome; soil
2780
2691
-
Ser
TGA
[ENA]
¢þ
>WENV180016252
FSUH01000147
[FSUH] metagenome; soil
3397
3308
-
Ser
CGA
[ENA]
¢þ
>WENV180016251
FSUH01000147
[FSUH] metagenome; soil
3506
3431
-
Arg
CCT
[ENA]
¢þ
>WENV180016253
FSUH01000157
[FSUH] metagenome; soil
3969
3896
-
Gly
TCC
[ENA]
¢þ
>WENV180016248
FSUH01000077
[FSUH] metagenome; soil
4145
4069
-
Asp
GTC
[ENA]
¢þ
>WENV180016246
FSUH01000049
[FSUH] metagenome; soil
6693
6617
-
Arg
GCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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