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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FSVL] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180016602
FSVL01000114
[FSVL] metagenome; soil
5
88
+
Leu
CAG
[ENA]
¢þ
>WENV180016599
FSVL01000047
[FSVL] metagenome; soil
15
89
+
Asp
GTC
[ENA]
¢þ
>WENV180016600
FSVL01000047
[FSVL] metagenome; soil
116
190
+
Phe
GAA
[ENA]
¢þ
>WENV180016598
FSVL01000013
[FSVL] metagenome; soil
1141
1066
-
Trp
CCA
[ENA]
¢þ
>WENV180016597
FSVL01000013
[FSVL] metagenome; soil
1251
1176
-
fMet
CAT
[ENA]
¢þ
>WENV180016596
FSVL01000002
[FSVL] metagenome; soil
1390
1315
-
Leu
CAA
[ENA]
¢þ
>WENV180016603
FSVL01000191
[FSVL] metagenome; soil
1428
1504
+
Ala
CGC
[ENA]
¢þ
>WENV180016604
FSVL01000206
[FSVL] metagenome; soil
1474
1401
-
Ala
GGC
[ENA]
¢þ
>WENV180016601
FSVL01000100
[FSVL] metagenome; soil
4076
4150
+
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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