This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSVP] metagenome; soil
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180016632
FSVP01000372
[FSVP] metagenome; soil
5
95
+
Ser
GGA
[ENA]
¢þ
>WENV180016628
FSVP01000021
[FSVP] metagenome; soil
12
88
+
Arg
ACG
[ENA]
¢þ
>WENV180016631
FSVP01000155
[FSVP] metagenome; soil
177
102
-
Asn
GTT
[ENA]
¢þ
>WENV180016634
FSVP01000396
[FSVP] metagenome; soil
334
408
+
Val
CAC
[ENA]
¢þ
>WENV180016633
FSVP01000387
[FSVP] metagenome; soil
1592
1668
+
Arg
CCG
[ENA]
¢þ
>WENV180016629
FSVP01000034
[FSVP] metagenome; soil
2069
2145
+
Arg
CCG
[ENA]
¢þ
>WENV180016630
FSVP01000069
[FSVP] metagenome; soil
3335
3251
-
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK