This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSVQ] metagenome; soil
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180016641
FSVQ01000105
[FSVQ] metagenome; soil
66
155
+
Ser
TGA
[ENA]
¢þ
>WENV180016640
FSVQ01000095
[FSVQ] metagenome; soil
578
663
+
Leu
TAA
[ENA]
¢þ
>WENV180016637
FSVQ01000068
[FSVQ] metagenome; soil
652
726
+
Val
CAC
[ENA]
¢þ
>WENV180016636
FSVQ01000054
[FSVQ] metagenome; soil
1271
1345
+
Lys
TTT
[ENA]
¢þ
>WENV180016638
FSVQ01000079
[FSVQ] metagenome; soil
2615
2540
-
Ala
CGC
[ENA]
¢þ
>WENV180016635
FSVQ01000025
[FSVQ] metagenome; soil
2813
2739
-
Glu
CTC
[ENA]
¢þ
>WENV180016642
FSVQ01000134
[FSVQ] metagenome; soil
3542
3458
-
Leu
CAA
[ENA]
¢þ
>WENV180016639
FSVQ01000082
[FSVQ] metagenome; soil
5216
5140
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK