This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSWG] metagenome; soil
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180016944
FSWG01000141
[FSWG] metagenome; soil
5
95
+
Ser
GGA
[ENA]
¢þ
>WENV180016945
FSWG01000142
[FSWG] metagenome; soil
23
99
+
Ile2
CAT
[ENA]
¢þ
>WENV180016948
FSWG01000203
[FSWG] metagenome; soil
25
98
+
Cys
GCA
[ENA]
¢þ
>WENV180016949
FSWG01000213
[FSWG] metagenome; soil
1217
1293
+
Arg
CCG
[ENA]
¢þ
>WENV180016942
FSWG01000042
[FSWG] metagenome; soil
2069
1995
-
Val
CAC
[ENA]
¢þ
>WENV180016947
FSWG01000187
[FSWG] metagenome; soil
3897
3810
-
Ser
TGA
[ENA]
¢þ
>WENV180016943
FSWG01000087
[FSWG] metagenome; soil
5351
5276
-
His
GTG
[ENA]
¢þ
>WENV180016946
FSWG01000146
[FSWG] metagenome; soil
6033
5958
-
Thr
TGT
[ENA]
¢þ
>WENV180016951
FSWG01000289
[FSWG] metagenome; soil
9151
9067
-
Leu
CAA
[ENA]
¢þ
>WENV180016950
FSWG01000267
[FSWG] metagenome; soil
39336
39420
+
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK