This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSWP] metagenome; soil
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180017189
FSWP01000696
[FSWP] metagenome; soil
2
78
+
Arg
ACG
[ENA]
¢þ
>WENV180017187
FSWP01000602
[FSWP] metagenome; soil
23
98
+
Glu
TTC
[ENA]
¢þ
>WENV180017188
FSWP01000637
[FSWP] metagenome; soil
89
4
-
Tyr
GTA
[ENA]
¢þ
>WENV180017186
FSWP01000415
[FSWP] metagenome; soil
217
292
+
Lys
TTT
[ENA]
¢þ
>WENV180017182
FSWP01000060
[FSWP] metagenome; soil
355
439
+
Ser
TGA
[ENA]
¢þ
>WENV180017183
FSWP01000060
[FSWP] metagenome; soil
670
743
+
Arg
TCT
[ENA]
¢þ
>WENV180017184
FSWP01000133
[FSWP] metagenome; soil
2098
2182
+
Leu
GAG
[ENA]
¢þ
>WENV180017185
FSWP01000198
[FSWP] metagenome; soil
3142
3215
+
Gly
CCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK