This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FSWS] metagenome; soil
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180017309
FSWS01000081
[FSWS] metagenome; soil
84
10
-
Phe
GAA
[ENA]
¢þ
>WENV180017312
FSWS01000130
[FSWS] metagenome; soil
93
7
-
Leu
TAA
[ENA]
¢þ
>WENV180017307
FSWS01000060
[FSWS] metagenome; soil
1746
1674
-
Thr
TGT
[ENA]
¢þ
>WENV180017311
FSWS01000104
[FSWS] metagenome; soil
2097
2023
-
Gly
CCC
[ENA]
¢þ
>WENV180017308
FSWS01000068
[FSWS] metagenome; soil
7725
7801
+
Glu
CTC
[ENA]
¢þ
>WENV180017306
FSWS01000057
[FSWS] metagenome; soil
9234
9310
+
Pro
GGG
[ENA]
¢þ
>WENV180017310
FSWS01000085
[FSWS] metagenome; soil
9985
9910
-
Trp
CCA
[ENA]
¢þ
>WENV180017313
FSWS01000131
[FSWS] metagenome; soil
23008
23083
+
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK