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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FSYK] metagenome; soil
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180018123
FSYK01000061
[FSYK] metagenome; soil
78
6
-
Met
CAT
[ENA]
¢þ
>WENV180018117
FSYK01000020
[FSYK] metagenome; soil
80
-1
-
Leu
GAG
[ENA]
¢þ
>WENV180018118
FSYK01000027
[FSYK] metagenome; soil
140
67
-
Thr
TGT
[ENA]
¢þ
>WENV180018120
FSYK01000053
[FSYK] metagenome; soil
743
817
+
Gln
TTG
[ENA]
¢þ
>WENV180018119
FSYK01000029
[FSYK] metagenome; soil
1162
1073
-
Ser
TGA
[ENA]
¢þ
>WENV180018122
FSYK01000060
[FSYK] metagenome; soil
5046
5134
+
Ser
CGA
[ENA]
¢þ
>WENV180018124
FSYK01000064
[FSYK] metagenome; soil
12165
12239
+
Val
GAC
[ENA]
¢þ
>WENV180018121
FSYK01000058
[FSYK] metagenome; soil
13505
13414
-
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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