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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[ODEM] human metagenome; G_DNA_Tongue dorsum
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180706286
ODEM01006125
[ODEM] human metagenome; G_DNA_Tongue dorsum
31
104
+
Val
CAC
[ENA]
¡û
>WENV180706296
ODEM01009834
[ODEM] human metagenome; G_DNA_Tongue dorsum
33
106
+
Gln
TTG
[ENA]
¡û
>WENV180706278
ODEM01002415
[ODEM] human metagenome; G_DNA_Tongue dorsum
36
108
+
Val
GAC
[ENA]
¡û
>WENV180706288
ODEM01006723
[ODEM] human metagenome; G_DNA_Tongue dorsum
43
117
+
Glu
TTC
[ENA]
¡û
>WENV180706263
ODEM01001199
[ODEM] human metagenome; G_DNA_Tongue dorsum
75
157
+
Tyr
GTA
[ENA]
¡û
>WENV180706273
ODEM01001582
[ODEM] human metagenome; G_DNA_Tongue dorsum
81
7
-
Val
TAC
[ENA]
¡û
>WENV180706293
ODEM01008646
[ODEM] human metagenome; G_DNA_Tongue dorsum
92
167
+
Thr
CGT
[ENA]
¡û
>WENV180706295
ODEM01009597
[ODEM] human metagenome; G_DNA_Tongue dorsum
101
25
-
fMet
CAT
[ENA]
¡û
>WENV180706281
ODEM01002634
[ODEM] human metagenome; G_DNA_Tongue dorsum
101
28
-
Arg
ACG
[ENA]
¡û
>WENV180706292
ODEM01008183
[ODEM] human metagenome; G_DNA_Tongue dorsum
110
34
-
Arg
ACG
[ENA]
¡û
>WENV180706297
ODEM01009834
[ODEM] human metagenome; G_DNA_Tongue dorsum
118
190
+
Cys
GCA
[ENA]
¡û
>WENV180706259
ODEM01000726
[ODEM] human metagenome; G_DNA_Tongue dorsum
120
45
-
Glu
TTC
[ENA]
¡û
>WENV180706289
ODEM01006723
[ODEM] human metagenome; G_DNA_Tongue dorsum
122
197
+
Val
TAC
[ENA]
¡û
>WENV180706268
ODEM01001346
[ODEM] human metagenome; G_DNA_Tongue dorsum
129
58
-
Cys
GCA
[ENA]
¡û
>WENV180706236
ODEM01000023
[ODEM] human metagenome; G_DNA_Tongue dorsum
135
207
+
Asn
GTT
[ENA]
¡û
>WENV180706290
ODEM01007775
[ODEM] human metagenome; G_DNA_Tongue dorsum
138
64
-
Pro
GGG
[ENA]
¡û
>WENV180706294
ODEM01008728
[ODEM] human metagenome; G_DNA_Tongue dorsum
146
73
-
Gly
TCC
[ENA]
¡û
>WENV180706275
ODEM01001721
[ODEM] human metagenome; G_DNA_Tongue dorsum
173
247
+
Ala
TGC
[ENA]
¡û
>WENV180706280
ODEM01002602
[ODEM] human metagenome; G_DNA_Tongue dorsum
178
253
+
Thr
TGT
[ENA]
¡û
>WENV180706287
ODEM01006503
[ODEM] human metagenome; G_DNA_Tongue dorsum
180
88
-
Ser
TGA
[ENA]
¡û
>WENV180706251
ODEM01000429
[ODEM] human metagenome; G_DNA_Tongue dorsum
196
122
-
Ala
TGC
[ENA]
¡û
>WENV180706291
ODEM01008183
[ODEM] human metagenome; G_DNA_Tongue dorsum
211
123
-
Leu
TAA
[ENA]
¡û
>WENV180706261
ODEM01001032
[ODEM] human metagenome; G_DNA_Tongue dorsum
217
290
+
Trp
CCA
[ENA]
¡û
>WENV180706285
ODEM01003947
[ODEM] human metagenome; G_DNA_Tongue dorsum
226
142
-
Leu
TAG
[ENA]
¡û
>WENV180706267
ODEM01001346
[ODEM] human metagenome; G_DNA_Tongue dorsum
230
157
-
Gly
GCC
[ENA]
¡û
>WENV180706283
ODEM01003389
[ODEM] human metagenome; G_DNA_Tongue dorsum
231
303
+
Thr
GGT
[ENA]
¡û
>WENV180706284
ODEM01003907
[ODEM] human metagenome; G_DNA_Tongue dorsum
234
310
+
Ile2
CAT
[ENA]
¡û
>WENV180706270
ODEM01001403
[ODEM] human metagenome; G_DNA_Tongue dorsum
244
169
-
Glu
CTC
[ENA]
¡û
>WENV180706271
ODEM01001408
[ODEM] human metagenome; G_DNA_Tongue dorsum
263
346
+
Leu
CAG
[ENA]
¡û
>WENV180706258
ODEM01000726
[ODEM] human metagenome; G_DNA_Tongue dorsum
274
199
-
Ala
GGC
[ENA]
¡û
>WENV180706279
ODEM01002487
[ODEM] human metagenome; G_DNA_Tongue dorsum
279
364
+
Ser
TGA
[ENA]
¡û
>WENV180706282
ODEM01002917
[ODEM] human metagenome; G_DNA_Tongue dorsum
296
370
+
Lys
CTT
[ENA]
¡û
>WENV180706257
ODEM01000693
[ODEM] human metagenome; G_DNA_Tongue dorsum
315
239
-
Pro
CGG
[ENA]
¡û
>WENV180706277
ODEM01001853
[ODEM] human metagenome; G_DNA_Tongue dorsum
334
249
-
Ser
TGA
[ENA]
¡û
>WENV180706264
ODEM01001199
[ODEM] human metagenome; G_DNA_Tongue dorsum
358
431
+
Thr
GGT
[ENA]
¡û
>WENV180706266
ODEM01001268
[ODEM] human metagenome; G_DNA_Tongue dorsum
366
441
+
Trp
CCA
[ENA]
¡û
>WENV180706241
ODEM01000061
[ODEM] human metagenome; G_DNA_Tongue dorsum
381
311
-
Met
CAT
[ENA]
¡û
>WENV180706246
ODEM01000316
[ODEM] human metagenome; G_DNA_Tongue dorsum
384
458
+
Asp
GTC
[ENA]
¡û
>WENV180706276
ODEM01001853
[ODEM] human metagenome; G_DNA_Tongue dorsum
440
358
-
Tyr
GTA
[ENA]
¡û
>WENV180706269
ODEM01001403
[ODEM] human metagenome; G_DNA_Tongue dorsum
452
380
-
Gln
CTG
[ENA]
¡û
>WENV180706260
ODEM01001011
[ODEM] human metagenome; G_DNA_Tongue dorsum
469
393
-
fMet
CAT
[ENA]
¡û
>WENV180706262
ODEM01001097
[ODEM] human metagenome; G_DNA_Tongue dorsum
484
557
+
Asn
GTT
[ENA]
¡û
>WENV180706274
ODEM01001663
[ODEM] human metagenome; G_DNA_Tongue dorsum
492
407
-
Ser
GGA
[ENA]
¡û
>WENV180706265
ODEM01001199
[ODEM] human metagenome; G_DNA_Tongue dorsum
496
570
+
Met
CAT
[ENA]
¡û
>WENV180706247
ODEM01000316
[ODEM] human metagenome; G_DNA_Tongue dorsum
519
594
+
Phe
GAA
[ENA]
¡û
>WENV180706249
ODEM01000353
[ODEM] human metagenome; G_DNA_Tongue dorsum
529
604
+
Lys
TTT
[ENA]
¡û
>WENV180706272
ODEM01001520
[ODEM] human metagenome; G_DNA_Tongue dorsum
545
470
-
Asn
GTT
[ENA]
¡û
>WENV180706239
ODEM01000059
[ODEM] human metagenome; G_DNA_Tongue dorsum
548
618
+
Val
TAC
[ENA]
¡û
>WENV180706256
ODEM01000587
[ODEM] human metagenome; G_DNA_Tongue dorsum
555
481
-
Lys
TTT
[ENA]
¡û
>WENV180706254
ODEM01000538
[ODEM] human metagenome; G_DNA_Tongue dorsum
632
715
+
Leu
TAG
[ENA]
¡û
>WENV180706253
ODEM01000494
[ODEM] human metagenome; G_DNA_Tongue dorsum
709
782
+
Ala
GGC
[ENA]
¡û
>WENV180706255
ODEM01000553
[ODEM] human metagenome; G_DNA_Tongue dorsum
815
890
+
His
GTG
[ENA]
¡û
>WENV180706244
ODEM01000151
[ODEM] human metagenome; G_DNA_Tongue dorsum
941
1016
+
Arg
TCT
[ENA]
¡û
>WENV180706252
ODEM01000482
[ODEM] human metagenome; G_DNA_Tongue dorsum
1069
996
-
Arg
CCT
[ENA]
¡û
>WENV180706250
ODEM01000353
[ODEM] human metagenome; G_DNA_Tongue dorsum
1209
1136
-
Thr
TGT
[ENA]
¡û
>WENV180706248
ODEM01000318
[ODEM] human metagenome; G_DNA_Tongue dorsum
1263
1188
-
Ala
TGC
[ENA]
¡û
>WENV180706245
ODEM01000219
[ODEM] human metagenome; G_DNA_Tongue dorsum
1359
1284
-
Thr
CGT
[ENA]
¡û
>WENV180706240
ODEM01000061
[ODEM] human metagenome; G_DNA_Tongue dorsum
1607
1680
+
His
GTG
[ENA]
¡û
>WENV180706237
ODEM01000038
[ODEM] human metagenome; G_DNA_Tongue dorsum
1632
1716
+
Leu
TAG
[ENA]
¡û
>WENV180706243
ODEM01000143
[ODEM] human metagenome; G_DNA_Tongue dorsum
1643
1570
-
Gly
TCC
[ENA]
¡û
>WENV180706242
ODEM01000063
[ODEM] human metagenome; G_DNA_Tongue dorsum
1966
2053
+
Ser
CGA
[ENA]
¡û
>WENV180706238
ODEM01000038
[ODEM] human metagenome; G_DNA_Tongue dorsum
2093
2168
+
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK