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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[ODXH] human metagenome; G_DNA_Anterior nares
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181030389
ODXH01002448
[ODXH] human metagenome; G_DNA_Anterior nares
21
95
+
Leu
TAA
[ENA]
¡û
>WENV181030392
ODXH01003130
[ODXH] human metagenome; G_DNA_Anterior nares
34
121
+
Leu
CAG
[ENA]
¡û
>WENV181030391
ODXH01003112
[ODXH] human metagenome; G_DNA_Anterior nares
58
152
+
SeC
TCA
[ENA]
¡û
>WENV181030390
ODXH01002764
[ODXH] human metagenome; G_DNA_Anterior nares
88
163
+
Gly
GCC
[ENA]
¡û
>WENV181030386
ODXH01001762
[ODXH] human metagenome; G_DNA_Anterior nares
95
169
+
Leu
CAA
[ENA]
¡û
>WENV181030384
ODXH01000810
[ODXH] human metagenome; G_DNA_Anterior nares
98
25
-
Thr
GGT
[ENA]
¡û
>WENV181030380
ODXH01000237
[ODXH] human metagenome; G_DNA_Anterior nares
103
191
+
Ser
CGA
[ENA]
¡û
>WENV181030388
ODXH01002379
[ODXH] human metagenome; G_DNA_Anterior nares
123
50
-
His
GTG
[ENA]
¡û
>WENV181030383
ODXH01000427
[ODXH] human metagenome; G_DNA_Anterior nares
180
254
+
Ile2
CAT
[ENA]
¡û
>WENV181030387
ODXH01001870
[ODXH] human metagenome; G_DNA_Anterior nares
189
101
-
Ser
GCT
[ENA]
¡û
>WENV181030385
ODXH01001529
[ODXH] human metagenome; G_DNA_Anterior nares
218
145
-
Lys
CTT
[ENA]
¡û
>WENV181030382
ODXH01000283
[ODXH] human metagenome; G_DNA_Anterior nares
280
205
-
Asp
GTC
[ENA]
¡û
>WENV181030381
ODXH01000283
[ODXH] human metagenome; G_DNA_Anterior nares
381
307
-
Phe
GAA
[ENA]
¡û
>WENV181030379
ODXH01000153
[ODXH] human metagenome; G_DNA_Anterior nares
429
513
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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