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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OHIW] human gut metagenome; feces
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182112761
OHIW01003398
[OHIW] human gut metagenome; feces
26
119
+
Ser
GCT
[ENA]
¡û
>WENV182112753
OHIW01002705
[OHIW] human gut metagenome; feces
44
119
+
Pro
TGG
[ENA]
¡û
>WENV182112745
OHIW01001693
[OHIW] human gut metagenome; feces
76
151
+
Pro
TGG
[ENA]
¡û
>WENV182112744
OHIW01001625
[OHIW] human gut metagenome; feces
88
181
+
Ser
GCT
[ENA]
¡û
>WENV182112747
OHIW01001844
[OHIW] human gut metagenome; feces
118
35
-
Leu
GAG
[ENA]
¡û
>WENV182112762
OHIW01003724
[OHIW] human gut metagenome; feces
131
55
-
Arg
TCT
[ENA]
¡û
>WENV182112754
OHIW01002705
[OHIW] human gut metagenome; feces
136
206
+
Gly
TCC
[ENA]
¡û
>WENV182112759
OHIW01002776
[OHIW] human gut metagenome; feces
166
240
+
Glu
CTC
[ENA]
¡û
>WENV182112751
OHIW01002427
[OHIW] human gut metagenome; feces
175
259
+
Leu
CAA
[ENA]
¡û
>WENV182112729
OHIW01000715
[OHIW] human gut metagenome; feces
184
260
+
Arg
CCT
[ENA]
¡û
>WENV182112750
OHIW01002335
[OHIW] human gut metagenome; feces
243
316
+
Phe
GAA
[ENA]
¡û
>WENV182112763
OHIW01003755
[OHIW] human gut metagenome; feces
253
179
-
Met
CAT
[ENA]
¡û
>WENV182112760
OHIW01002776
[OHIW] human gut metagenome; feces
282
358
+
Asn
GTT
[ENA]
¡û
>WENV182112735
OHIW01001180
[OHIW] human gut metagenome; feces
288
361
+
fMet
CAT
[ENA]
¡û
>WENV182112717
OHIW01000041
[OHIW] human gut metagenome; feces
314
237
-
Arg
CCT
[ENA]
¡û
>WENV182112733
OHIW01000957
[OHIW] human gut metagenome; feces
322
238
-
Leu
TAA
[ENA]
¡û
>WENV182112768
OHIW01004146
[OHIW] human gut metagenome; feces
323
247
-
Ile
GAT
[ENA]
¡û
>WENV182112755
OHIW01002705
[OHIW] human gut metagenome; feces
340
414
+
His
GTG
[ENA]
¡û
>WENV182112736
OHIW01001264
[OHIW] human gut metagenome; feces
342
268
-
Ala
GGC
[ENA]
¡û
>WENV182112766
OHIW01004134
[OHIW] human gut metagenome; feces
349
262
-
Leu
TAA
[ENA]
¡û
>WENV182112758
OHIW01002754
[OHIW] human gut metagenome; feces
371
296
-
Val
GAC
[ENA]
¡û
>WENV182112764
OHIW01004116
[OHIW] human gut metagenome; feces
379
294
-
Leu
TAA
[ENA]
¡û
>WENV182112730
OHIW01000726
[OHIW] human gut metagenome; feces
395
321
-
Asn
GTT
[ENA]
¡û
>WENV182112767
OHIW01004146
[OHIW] human gut metagenome; feces
402
327
-
Ala
TGC
[ENA]
¡û
>WENV182112725
OHIW01000595
[OHIW] human gut metagenome; feces
404
478
+
Thr
TGT
[ENA]
¡û
>WENV182112752
OHIW01002593
[OHIW] human gut metagenome; feces
405
330
-
Val
TAC
[ENA]
¡û
>WENV182112732
OHIW01000957
[OHIW] human gut metagenome; feces
415
342
-
Gly
GCC
[ENA]
¡û
>WENV182112756
OHIW01002705
[OHIW] human gut metagenome; feces
424
497
+
Gln
TTG
[ENA]
¡û
>WENV182112765
OHIW01004134
[OHIW] human gut metagenome; feces
427
352
-
Asp
GTC
[ENA]
¡û
>WENV182112742
OHIW01001363
[OHIW] human gut metagenome; feces
433
507
+
Asp
GTC
[ENA]
¡û
>WENV182112738
OHIW01001359
[OHIW] human gut metagenome; feces
450
525
+
Gly
GCC
[ENA]
¡û
>WENV182112731
OHIW01000761
[OHIW] human gut metagenome; feces
458
529
+
Gln
TTG
[ENA]
¡û
>WENV182112746
OHIW01001801
[OHIW] human gut metagenome; feces
492
410
-
Leu
TAG
[ENA]
¡û
>WENV182112743
OHIW01001557
[OHIW] human gut metagenome; feces
507
586
+
Leu
CAA
[ENA]
¡û
>WENV182112757
OHIW01002705
[OHIW] human gut metagenome; feces
513
587
+
Lys
TTT
[ENA]
¡û
>WENV182112739
OHIW01001359
[OHIW] human gut metagenome; feces
532
607
+
Val
TAC
[ENA]
¡û
>WENV182112748
OHIW01002003
[OHIW] human gut metagenome; feces
537
611
+
fMet
CAT
[ENA]
¡û
>WENV182112737
OHIW01001295
[OHIW] human gut metagenome; feces
563
637
+
Arg
TCT
[ENA]
¡û
>WENV182112726
OHIW01000595
[OHIW] human gut metagenome; feces
602
685
+
Tyr
GTA
[ENA]
¡û
>WENV182112734
OHIW01000998
[OHIW] human gut metagenome; feces
605
689
+
Tyr
GTA
[ENA]
¡û
>WENV182112740
OHIW01001359
[OHIW] human gut metagenome; feces
611
685
+
Asp
GTC
[ENA]
¡û
>WENV182112749
OHIW01002003
[OHIW] human gut metagenome; feces
616
690
+
Phe
GAA
[ENA]
¡û
>WENV182112727
OHIW01000595
[OHIW] human gut metagenome; feces
702
774
+
Thr
GGT
[ENA]
¡û
>WENV182112741
OHIW01001359
[OHIW] human gut metagenome; feces
713
788
+
Phe
GAA
[ENA]
¡û
>WENV182112720
OHIW01000396
[OHIW] human gut metagenome; feces
816
889
+
Asn
GTT
[ENA]
¡û
>WENV182112728
OHIW01000671
[OHIW] human gut metagenome; feces
833
747
-
Leu
CAG
[ENA]
¡û
>WENV182112718
OHIW01000080
[OHIW] human gut metagenome; feces
856
928
+
Glu
TTC
[ENA]
¡û
>WENV182112721
OHIW01000396
[OHIW] human gut metagenome; feces
893
964
+
Glu
TTC
[ENA]
¡û
>WENV182112722
OHIW01000396
[OHIW] human gut metagenome; feces
1111
1185
+
fMet
CAT
[ENA]
¡û
>WENV182112719
OHIW01000226
[OHIW] human gut metagenome; feces
1163
1091
-
Arg
CCT
[ENA]
¡û
>WENV182112724
OHIW01000400
[OHIW] human gut metagenome; feces
1236
1324
+
Ser
GGA
[ENA]
¡û
>WENV182112723
OHIW01000396
[OHIW] human gut metagenome; feces
1283
1357
+
Glu
CTC
[ENA]
¡û
>WENV182112716
OHIW01000015
[OHIW] human gut metagenome; feces
2058
1984
-
Ala
TGC
[ENA]
¡û
>WENV182112715
OHIW01000015
[OHIW] human gut metagenome; feces
2222
2148
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK