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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIAI] human gut metagenome; feces
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182342753
OIAI01001289
[OIAI] human gut metagenome; feces
5
79
+
Ile
GAT
[ENA]
¡û
>WENV182342801
OIAI01005375
[OIAI] human gut metagenome; feces
33
105
+
Thr
TGT
[ENA]
¡û
>WENV182342772
OIAI01002251
[OIAI] human gut metagenome; feces
74
1
-
His
GTG
[ENA]
¡û
>WENV182342793
OIAI01004533
[OIAI] human gut metagenome; feces
87
162
+
Ala
GGC
[ENA]
¡û
>WENV182342790
OIAI01004292
[OIAI] human gut metagenome; feces
114
22
-
Ser
GGA
[ENA]
¡û
>WENV182342802
OIAI01005375
[OIAI] human gut metagenome; feces
115
191
+
Ile2
CAT
[ENA]
¡û
>WENV182342791
OIAI01004374
[OIAI] human gut metagenome; feces
117
191
+
Ile
GAT
[ENA]
¡û
>WENV182342797
OIAI01004638
[OIAI] human gut metagenome; feces
125
50
-
Thr
GGT
[ENA]
¡û
>WENV182342798
OIAI01005043
[OIAI] human gut metagenome; feces
166
94
-
Glu
TTC
[ENA]
¡û
>WENV182342761
OIAI01001845
[OIAI] human gut metagenome; feces
197
271
+
Phe
GAA
[ENA]
¡û
>WENV182342806
OIAI01005936
[OIAI] human gut metagenome; feces
202
128
-
Gln
CTG
[ENA]
¡û
>WENV182342792
OIAI01004374
[OIAI] human gut metagenome; feces
209
283
+
Ala
TGC
[ENA]
¡û
>WENV182342750
OIAI01000826
[OIAI] human gut metagenome; feces
211
293
+
Leu
CAA
[ENA]
¡û
>WENV182342796
OIAI01004638
[OIAI] human gut metagenome; feces
218
133
-
Tyr
GTA
[ENA]
¡û
>WENV182342779
OIAI01002811
[OIAI] human gut metagenome; feces
227
300
+
Ala
GGC
[ENA]
¡û
>WENV182342799
OIAI01005087
[OIAI] human gut metagenome; feces
232
156
-
Pro
GGG
[ENA]
¡û
>WENV182342778
OIAI01002702
[OIAI] human gut metagenome; feces
239
314
+
Asn
GTT
[ENA]
¡û
>WENV182342759
OIAI01001636
[OIAI] human gut metagenome; feces
271
346
+
Lys
TTT
[ENA]
¡û
>WENV182342788
OIAI01003973
[OIAI] human gut metagenome; feces
274
200
-
Thr
TGT
[ENA]
¡û
>WENV182342795
OIAI01004609
[OIAI] human gut metagenome; feces
281
208
-
Gly
TCC
[ENA]
¡û
>WENV182342749
OIAI01000807
[OIAI] human gut metagenome; feces
283
208
-
Arg
TCT
[ENA]
¡û
>WENV182342794
OIAI01004533
[OIAI] human gut metagenome; feces
286
359
+
Val
CAC
[ENA]
¡û
>WENV182342762
OIAI01001845
[OIAI] human gut metagenome; feces
301
376
+
Lys
TTT
[ENA]
¡û
>WENV182342785
OIAI01003561
[OIAI] human gut metagenome; feces
305
378
+
Gly
CCC
[ENA]
¡û
>WENV182342786
OIAI01003730
[OIAI] human gut metagenome; feces
310
384
+
Asn
GTT
[ENA]
¡û
>WENV182342805
OIAI01005936
[OIAI] human gut metagenome; feces
313
240
-
Glu
CTC
[ENA]
¡û
>WENV182342804
OIAI01005851
[OIAI] human gut metagenome; feces
339
428
+
Ser
CGA
[ENA]
¡û
>WENV182342771
OIAI01002133
[OIAI] human gut metagenome; feces
352
278
-
Lys
TTT
[ENA]
¡û
>WENV182342783
OIAI01003318
[OIAI] human gut metagenome; feces
353
266
-
Ser
TGA
[ENA]
¡û
>WENV182342777
OIAI01002643
[OIAI] human gut metagenome; feces
354
439
+
Ser
TGA
[ENA]
¡û
>WENV182342787
OIAI01003936
[OIAI] human gut metagenome; feces
365
291
-
His
GTG
[ENA]
¡û
>WENV182342782
OIAI01003114
[OIAI] human gut metagenome; feces
372
298
-
Cys
GCA
[ENA]
¡û
>WENV182342776
OIAI01002614
[OIAI] human gut metagenome; feces
373
447
+
Glu
TTC
[ENA]
¡û
>WENV182342766
OIAI01002131
[OIAI] human gut metagenome; feces
385
303
-
Leu
TAG
[ENA]
¡û
>WENV182342784
OIAI01003460
[OIAI] human gut metagenome; feces
393
469
+
fMet
CAT
[ENA]
¡û
>WENV182342800
OIAI01005187
[OIAI] human gut metagenome; feces
394
308
-
Leu
CAA
[ENA]
¡û
>WENV182342808
OIAI01005957
[OIAI] human gut metagenome; feces
407
321
-
Ser
CGA
[ENA]
¡û
>WENV182342780
OIAI01002908
[OIAI] human gut metagenome; feces
412
485
+
Lys
TTT
[ENA]
¡û
>WENV182342744
OIAI01000624
[OIAI] human gut metagenome; feces
417
343
-
Met
CAT
[ENA]
¡û
>WENV182342773
OIAI01002304
[OIAI] human gut metagenome; feces
425
515
+
Ser
GGA
[ENA]
¡û
>WENV182342765
OIAI01002042
[OIAI] human gut metagenome; feces
439
513
+
Lys
CTT
[ENA]
¡û
>WENV182342803
OIAI01005574
[OIAI] human gut metagenome; feces
440
365
-
Pro
GGG
[ENA]
¡û
>WENV182342770
OIAI01002133
[OIAI] human gut metagenome; feces
440
369
-
Gln
TTG
[ENA]
¡û
>WENV182342760
OIAI01001679
[OIAI] human gut metagenome; feces
444
369
-
Trp
CCA
[ENA]
¡û
>WENV182342781
OIAI01003114
[OIAI] human gut metagenome; feces
448
375
-
Asn
GTT
[ENA]
¡û
>WENV182342789
OIAI01004051
[OIAI] human gut metagenome; feces
456
532
+
His
GTG
[ENA]
¡û
>WENV182342775
OIAI01002504
[OIAI] human gut metagenome; feces
495
421
-
Arg
CCT
[ENA]
¡û
>WENV182342764
OIAI01002041
[OIAI] human gut metagenome; feces
501
427
-
Ile
TAT
[ENA]
¡û
>WENV182342752
OIAI01001122
[OIAI] human gut metagenome; feces
509
428
-
Leu
TAG
[ENA]
¡û
>WENV182342757
OIAI01001381
[OIAI] human gut metagenome; feces
510
427
-
Leu
CAG
[ENA]
¡û
>WENV182342807
OIAI01005955
[OIAI] human gut metagenome; feces
513
440
-
Pro
CGG
[ENA]
¡û
>WENV182342746
OIAI01000704
[OIAI] human gut metagenome; feces
575
503
-
Glu
CTC
[ENA]
¡û
>WENV182342743
OIAI01000624
[OIAI] human gut metagenome; feces
577
495
-
Tyr
GTA
[ENA]
¡û
>WENV182342769
OIAI01002133
[OIAI] human gut metagenome; feces
582
508
-
His
GTG
[ENA]
¡û
>WENV182342755
OIAI01001338
[OIAI] human gut metagenome; feces
637
547
-
Ser
GGA
[ENA]
¡û
>WENV182342751
OIAI01001122
[OIAI] human gut metagenome; feces
677
602
-
Thr
CGT
[ENA]
¡û
>WENV182342745
OIAI01000704
[OIAI] human gut metagenome; feces
689
601
-
Ser
GCT
[ENA]
¡û
>WENV182342768
OIAI01002133
[OIAI] human gut metagenome; feces
704
629
-
Arg
TCT
[ENA]
¡û
>WENV182342763
OIAI01001944
[OIAI] human gut metagenome; feces
765
839
+
Lys
CTT
[ENA]
¡û
>WENV182342774
OIAI01002481
[OIAI] human gut metagenome; feces
774
699
-
Ala
TGC
[ENA]
¡û
>WENV182342742
OIAI01000552
[OIAI] human gut metagenome; feces
780
851
+
Gln
CTG
[ENA]
¡û
>WENV182342756
OIAI01001376
[OIAI] human gut metagenome; feces
781
707
-
Thr
TGT
[ENA]
¡û
>WENV182342767
OIAI01002133
[OIAI] human gut metagenome; feces
805
735
-
Gly
TCC
[ENA]
¡û
>WENV182342754
OIAI01001338
[OIAI] human gut metagenome; feces
821
735
-
Ser
TGA
[ENA]
¡û
>WENV182342748
OIAI01000719
[OIAI] human gut metagenome; feces
841
751
-
Ser
GCT
[ENA]
¡û
>WENV182342736
OIAI01000188
[OIAI] human gut metagenome; feces
885
811
-
Met
CAT
[ENA]
¡û
>WENV182342739
OIAI01000358
[OIAI] human gut metagenome; feces
888
963
+
Val
TAC
[ENA]
¡û
>WENV182342758
OIAI01001452
[OIAI] human gut metagenome; feces
980
907
-
Gly
GCC
[ENA]
¡û
>WENV182342747
OIAI01000719
[OIAI] human gut metagenome; feces
998
910
-
Ser
TGA
[ENA]
¡û
>WENV182342741
OIAI01000549
[OIAI] human gut metagenome; feces
1096
1023
-
Trp
CCA
[ENA]
¡û
>WENV182342734
OIAI01000061
[OIAI] human gut metagenome; feces
1149
1074
-
Lys
CTT
[ENA]
¡û
>WENV182342740
OIAI01000457
[OIAI] human gut metagenome; feces
1154
1228
+
Ala
GGC
[ENA]
¡û
>WENV182342738
OIAI01000310
[OIAI] human gut metagenome; feces
1623
1550
-
Phe
GAA
[ENA]
¡û
>WENV182342737
OIAI01000281
[OIAI] human gut metagenome; feces
1773
1702
-
Gln
TTG
[ENA]
¡û
>WENV182342732
OIAI01000058
[OIAI] human gut metagenome; feces
2470
2541
+
Asn
GTT
[ENA]
¡û
>WENV182342733
OIAI01000058
[OIAI] human gut metagenome; feces
2560
2631
+
Cys
GCA
[ENA]
¡û
>WENV182342735
OIAI01000072
[OIAI] human gut metagenome; feces
2562
2487
-
Ile2
CAT
[ENA]
¡û
>WENV182342731
OIAI01000013
[OIAI] human gut metagenome; feces
4350
4276
-
Ile2
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK