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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA gene List
[OIJT] human gut metagenome; human gut
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182439573
OIJT01002152
[OIJT] human gut metagenome; human gut
76
1
-
Thr
GGT
[ENA]
¡û
>WENV182439600
OIJT01005198
[OIJT] human gut metagenome; human gut
77
152
+
Asp
GTC
[ENA]
¡û
>WENV182439592
OIJT01004152
[OIJT] human gut metagenome; human gut
85
159
+
Cys
GCA
[ENA]
¡û
>WENV182439597
OIJT01004477
[OIJT] human gut metagenome; human gut
99
23
-
Pro
CGG
[ENA]
¡û
>WENV182439599
OIJT01005122
[OIJT] human gut metagenome; human gut
102
18
-
Tyr
GTA
[ENA]
¡û
>WENV182439544
OIJT01000693
[OIJT] human gut metagenome; human gut
149
76
-
Ala
TGC
[ENA]
¡û
>WENV182439577
OIJT01002289
[OIJT] human gut metagenome; human gut
155
71
-
Leu
TAG
[ENA]
¡û
>WENV182439601
OIJT01005198
[OIJT] human gut metagenome; human gut
157
231
+
Val
TAC
[ENA]
¡û
>WENV182439481
OIJT01000026
[OIJT] human gut metagenome; human gut
165
89
-
Val
TAC
[ENA]
¡û
>WENV182439591
OIJT01004132
[OIJT] human gut metagenome; human gut
167
94
-
Gln
TTG
[ENA]
¡û
>WENV182439586
OIJT01003296
[OIJT] human gut metagenome; human gut
170
97
-
Ala
CGC
[ENA]
¡û
>WENV182439574
OIJT01002260
[OIJT] human gut metagenome; human gut
187
262
+
Pro
TGG
[ENA]
¡û
>WENV182439558
OIJT01001232
[OIJT] human gut metagenome; human gut
194
119
-
Thr
GGT
[ENA]
¡û
>WENV182439606
OIJT01008146
[OIJT] human gut metagenome; human gut
198
107
-
Ser
GGA
[ENA]
¡û
>WENV182439579
OIJT01002370
[OIJT] human gut metagenome; human gut
205
132
-
Lys
CTT
[ENA]
¡û
>WENV182439495
OIJT01000041
[OIJT] human gut metagenome; human gut
206
131
-
Pro
GGG
[ENA]
¡û
>WENV182439590
OIJT01004026
[OIJT] human gut metagenome; human gut
217
141
-
fMet
CAT
[ENA]
¡û
>WENV182439505
OIJT01000084
[OIJT] human gut metagenome; human gut
219
145
-
Arg
TCT
[ENA]
¡û
>WENV182439528
OIJT01000344
[OIJT] human gut metagenome; human gut
222
129
-
Ser
GCT
[ENA]
¡û
>WENV182439593
OIJT01004218
[OIJT] human gut metagenome; human gut
229
304
+
Ala
TGC
[ENA]
¡û
>WENV182439576
OIJT01002289
[OIJT] human gut metagenome; human gut
242
166
-
Met
CAT
[ENA]
¡û
>WENV182439602
OIJT01005198
[OIJT] human gut metagenome; human gut
246
320
+
Met
CAT
[ENA]
¡û
>WENV182439575
OIJT01002260
[OIJT] human gut metagenome; human gut
267
339
+
Gly
TCC
[ENA]
¡û
>WENV182439557
OIJT01001232
[OIJT] human gut metagenome; human gut
275
201
-
Gly
TCC
[ENA]
¡û
>WENV182439605
OIJT01008146
[OIJT] human gut metagenome; human gut
298
205
-
Ser
CGA
[ENA]
¡û
>WENV182439581
OIJT01002796
[OIJT] human gut metagenome; human gut
300
382
+
Leu
CAA
[ENA]
¡û
>WENV182439594
OIJT01004218
[OIJT] human gut metagenome; human gut
308
384
+
Ile
GAT
[ENA]
¡û
>WENV182439521
OIJT01000275
[OIJT] human gut metagenome; human gut
318
244
-
His
GTG
[ENA]
¡û
>WENV182439527
OIJT01000344
[OIJT] human gut metagenome; human gut
343
256
-
Ser
TGA
[ENA]
¡û
>WENV182439543
OIJT01000634
[OIJT] human gut metagenome; human gut
350
275
-
Trp
CCA
[ENA]
¡û
>WENV182439604
OIJT01007904
[OIJT] human gut metagenome; human gut
350
421
+
Arg
CCG
[ENA]
¡û
>WENV182439567
OIJT01001765
[OIJT] human gut metagenome; human gut
364
439
+
Ile2
CAT
[ENA]
¡û
>WENV182439584
OIJT01003069
[OIJT] human gut metagenome; human gut
390
468
+
Arg
CCT
[ENA]
¡û
>WENV182439520
OIJT01000275
[OIJT] human gut metagenome; human gut
402
327
-
Arg
TCT
[ENA]
¡û
>WENV182439589
OIJT01003618
[OIJT] human gut metagenome; human gut
471
554
+
Leu
TAA
[ENA]
¡û
>WENV182439556
OIJT01001232
[OIJT] human gut metagenome; human gut
476
392
-
Tyr
GTA
[ENA]
¡û
>WENV182439560
OIJT01001379
[OIJT] human gut metagenome; human gut
487
401
-
Leu
AAG
[ENA]
¡û
>WENV182439570
OIJT01001821
[OIJT] human gut metagenome; human gut
490
417
-
Gly
GCC
[ENA]
¡û
>WENV182439572
OIJT01002111
[OIJT] human gut metagenome; human gut
511
436
-
Phe
GAA
[ENA]
¡û
>WENV182439517
OIJT01000202
[OIJT] human gut metagenome; human gut
534
459
-
Ile2
CAT
[ENA]
¡û
>WENV182439603
OIJT01006400
[OIJT] human gut metagenome; human gut
537
461
-
Asp
GTC
[ENA]
¡û
>WENV182439596
OIJT01004474
[OIJT] human gut metagenome; human gut
537
612
+
Thr
CGT
[ENA]
¡û
>WENV182439568
OIJT01001765
[OIJT] human gut metagenome; human gut
540
616
+
Arg
TCT
[ENA]
¡û
>WENV182439555
OIJT01001232
[OIJT] human gut metagenome; human gut
560
485
-
Thr
TGT
[ENA]
¡û
>WENV182439585
OIJT01003130
[OIJT] human gut metagenome; human gut
575
648
+
Gly
CCC
[ENA]
¡û
>WENV182439598
OIJT01004498
[OIJT] human gut metagenome; human gut
606
693
+
Ser
GCT
[ENA]
¡û
>WENV182439587
OIJT01003328
[OIJT] human gut metagenome; human gut
758
682
-
Arg
ACG
[ENA]
¡û
>WENV182439582
OIJT01002889
[OIJT] human gut metagenome; human gut
760
685
-
Asn
GTT
[ENA]
¡û
>WENV182439578
OIJT01002357
[OIJT] human gut metagenome; human gut
806
736
-
Gly
TCC
[ENA]
¡û
>WENV182439588
OIJT01003535
[OIJT] human gut metagenome; human gut
811
727
-
Leu
CAG
[ENA]
¡û
>WENV182439540
OIJT01000575
[OIJT] human gut metagenome; human gut
841
922
+
Leu
TAG
[ENA]
¡û
>WENV182439595
OIJT01004255
[OIJT] human gut metagenome; human gut
851
756
-
SeC
TCA
[ENA]
¡û
>WENV182439549
OIJT01000856
[OIJT] human gut metagenome; human gut
912
837
-
Pro
TGG
[ENA]
¡û
>WENV182439561
OIJT01001539
[OIJT] human gut metagenome; human gut
1010
1097
+
Ser
GGA
[ENA]
¡û
>WENV182439583
OIJT01002900
[OIJT] human gut metagenome; human gut
1017
942
-
Thr
CGT
[ENA]
¡û
>WENV182439541
OIJT01000575
[OIJT] human gut metagenome; human gut
1118
1036
-
Leu
GAG
[ENA]
¡û
>WENV182439559
OIJT01001342
[OIJT] human gut metagenome; human gut
1131
1059
-
Cys
GCA
[ENA]
¡û
>WENV182439580
OIJT01002372
[OIJT] human gut metagenome; human gut
1145
1221
+
Arg
ACG
[ENA]
¡û
>WENV182439552
OIJT01001173
[OIJT] human gut metagenome; human gut
1157
1082
-
Pro
CGG
[ENA]
¡û
>WENV182439565
OIJT01001677
[OIJT] human gut metagenome; human gut
1192
1119
-
Lys
TTT
[ENA]
¡û
>WENV182439516
OIJT01000175
[OIJT] human gut metagenome; human gut
1224
1298
+
Glu
CTC
[ENA]
¡û
>WENV182439513
OIJT01000147
[OIJT] human gut metagenome; human gut
1236
1161
-
Val
GAC
[ENA]
¡û
>WENV182439571
OIJT01001980
[OIJT] human gut metagenome; human gut
1258
1335
+
Arg
CCT
[ENA]
¡û
>WENV182439551
OIJT01001173
[OIJT] human gut metagenome; human gut
1262
1190
-
Gln
CTG
[ENA]
¡û
>WENV182439564
OIJT01001677
[OIJT] human gut metagenome; human gut
1298
1227
-
Gln
TTG
[ENA]
¡û
>WENV182439569
OIJT01001789
[OIJT] human gut metagenome; human gut
1314
1398
+
Leu
CAA
[ENA]
¡û
>WENV182439548
OIJT01000839
[OIJT] human gut metagenome; human gut
1334
1248
-
Leu
GAG
[ENA]
¡û
>WENV182439566
OIJT01001685
[OIJT] human gut metagenome; human gut
1381
1468
+
Ser
TGA
[ENA]
¡û
>WENV182439550
OIJT01000951
[OIJT] human gut metagenome; human gut
1394
1318
-
Arg
CCG
[ENA]
¡û
>WENV182439534
OIJT01000385
[OIJT] human gut metagenome; human gut
1426
1335
-
Ser
GGA
[ENA]
¡û
>WENV182439563
OIJT01001677
[OIJT] human gut metagenome; human gut
1426
1351
-
His
GTG
[ENA]
¡û
>WENV182439554
OIJT01001230
[OIJT] human gut metagenome; human gut
1458
1534
+
Pro
GGG
[ENA]
¡û
>WENV182439530
OIJT01000365
[OIJT] human gut metagenome; human gut
1465
1539
+
Ile
GAT
[ENA]
¡û
>WENV182439562
OIJT01001677
[OIJT] human gut metagenome; human gut
1507
1432
-
Arg
TCT
[ENA]
¡û
>WENV182439546
OIJT01000703
[OIJT] human gut metagenome; human gut
1550
1475
-
Pro
CGG
[ENA]
¡û
>WENV182439531
OIJT01000365
[OIJT] human gut metagenome; human gut
1556
1630
+
Ala
TGC
[ENA]
¡û
>WENV182439507
OIJT01000094
[OIJT] human gut metagenome; human gut
1563
1473
-
Ser
CGA
[ENA]
¡û
>WENV182439545
OIJT01000703
[OIJT] human gut metagenome; human gut
1657
1584
-
Gln
CTG
[ENA]
¡û
>WENV182439529
OIJT01000345
[OIJT] human gut metagenome; human gut
1688
1613
-
Gly
CCC
[ENA]
¡û
>WENV182439553
OIJT01001210
[OIJT] human gut metagenome; human gut
1689
1774
+
Tyr
GTA
[ENA]
¡û
>WENV182439542
OIJT01000591
[OIJT] human gut metagenome; human gut
1716
1645
-
Gln
TTG
[ENA]
¡û
>WENV182439526
OIJT01000333
[OIJT] human gut metagenome; human gut
1856
1781
-
Val
GAC
[ENA]
¡û
>WENV182439535
OIJT01000398
[OIJT] human gut metagenome; human gut
2324
2240
-
Leu
CAA
[ENA]
¡û
>WENV182439547
OIJT01000774
[OIJT] human gut metagenome; human gut
2433
2527
+
SeC
TCA
[ENA]
¡û
>WENV182439536
OIJT01000429
[OIJT] human gut metagenome; human gut
2527
2600
+
Glu
TTC
[ENA]
¡û
>WENV182439537
OIJT01000429
[OIJT] human gut metagenome; human gut
2605
2677
+
Thr
TGT
[ENA]
¡û
>WENV182439538
OIJT01000429
[OIJT] human gut metagenome; human gut
2703
2777
+
fMet
CAT
[ENA]
¡û
>WENV182439539
OIJT01000429
[OIJT] human gut metagenome; human gut
2782
2856
+
Phe
GAA
[ENA]
¡û
>WENV182439522
OIJT01000315
[OIJT] human gut metagenome; human gut
3799
3875
+
Arg
CCG
[ENA]
¡û
>WENV182439523
OIJT01000315
[OIJT] human gut metagenome; human gut
3934
4009
+
His
GTG
[ENA]
¡û
>WENV182439524
OIJT01000315
[OIJT] human gut metagenome; human gut
4030
4116
+
Leu
CAG
[ENA]
¡û
>WENV182439508
OIJT01000099
[OIJT] human gut metagenome; human gut
4045
4121
+
fMet
CAT
[ENA]
¡û
>WENV182439532
OIJT01000374
[OIJT] human gut metagenome; human gut
4074
4149
+
Trp
CCA
[ENA]
¡û
>WENV182439525
OIJT01000315
[OIJT] human gut metagenome; human gut
4159
4235
+
Pro
TGG
[ENA]
¡û
>WENV182439533
OIJT01000374
[OIJT] human gut metagenome; human gut
4434
4508
+
Asp
GTC
[ENA]
¡û
>WENV182439509
OIJT01000107
[OIJT] human gut metagenome; human gut
4615
4700
+
Ser
TGA
[ENA]
¡û
>WENV182439518
OIJT01000221
[OIJT] human gut metagenome; human gut
5300
5375
+
Thr
CGT
[ENA]
¡û
>WENV182439519
OIJT01000237
[OIJT] human gut metagenome; human gut
5681
5755
+
Gly
TCC
[ENA]
¡û
>WENV182439475
OIJT01000013
[OIJT] human gut metagenome; human gut
6511
6426
-
Ser
TGA
[ENA]
¡û
>WENV182439510
OIJT01000127
[OIJT] human gut metagenome; human gut
6734
6808
+
Glu
CTC
[ENA]
¡û
>WENV182439515
OIJT01000173
[OIJT] human gut metagenome; human gut
6830
6903
+
Ile2
CAT
[ENA]
¡û
>WENV182439511
OIJT01000127
[OIJT] human gut metagenome; human gut
6850
6926
+
Asn
GTT
[ENA]
¡û
>WENV182439514
OIJT01000165
[OIJT] human gut metagenome; human gut
8942
8866
-
Val
TAC
[ENA]
¡û
>WENV182439512
OIJT01000137
[OIJT] human gut metagenome; human gut
10137
10058
-
Leu
CAA
[ENA]
¡û
>WENV182439506
OIJT01000093
[OIJT] human gut metagenome; human gut
10372
10297
-
His
GTG
[ENA]
¡û
>WENV182439504
OIJT01000079
[OIJT] human gut metagenome; human gut
12163
12088
-
Phe
GAA
[ENA]
¡û
>WENV182439503
OIJT01000067
[OIJT] human gut metagenome; human gut
12331
12243
-
Ser
GGA
[ENA]
¡û
>WENV182439478
OIJT01000017
[OIJT] human gut metagenome; human gut
13039
12957
-
Leu
TAG
[ENA]
¡û
>WENV182439493
OIJT01000040
[OIJT] human gut metagenome; human gut
14710
14784
+
Thr
TGT
[ENA]
¡û
>WENV182439485
OIJT01000028
[OIJT] human gut metagenome; human gut
15545
15470
-
Lys
TTT
[ENA]
¡û
>WENV182439500
OIJT01000064
[OIJT] human gut metagenome; human gut
17300
17373
+
Gly
CCC
[ENA]
¡û
>WENV182439496
OIJT01000044
[OIJT] human gut metagenome; human gut
17342
17417
+
Pro
TGG
[ENA]
¡û
>WENV182439502
OIJT01000065
[OIJT] human gut metagenome; human gut
17535
17461
-
Glu
TTC
[ENA]
¡û
>WENV182439501
OIJT01000065
[OIJT] human gut metagenome; human gut
17703
17627
-
Met
CAT
[ENA]
¡û
>WENV182439476
OIJT01000014
[OIJT] human gut metagenome; human gut
18070
18144
+
Ile2
CAT
[ENA]
¡û
>WENV182439480
OIJT01000025
[OIJT] human gut metagenome; human gut
18622
18696
+
Glu
TTC
[ENA]
¡û
>WENV182439474
OIJT01000013
[OIJT] human gut metagenome; human gut
20133
20206
+
Trp
CCA
[ENA]
¡û
>WENV182439499
OIJT01000060
[OIJT] human gut metagenome; human gut
21186
21098
-
Ser
GGA
[ENA]
¡û
>WENV182439492
OIJT01000036
[OIJT] human gut metagenome; human gut
25283
25209
-
Asn
GTT
[ENA]
¡û
>WENV182439491
OIJT01000036
[OIJT] human gut metagenome; human gut
25382
25308
-
Asn
GTT
[ENA]
¡û
>WENV182439477
OIJT01000016
[OIJT] human gut metagenome; human gut
25807
25879
+
Arg
CCT
[ENA]
¡û
>WENV182439498
OIJT01000059
[OIJT] human gut metagenome; human gut
29645
29719
+
Cys
GCA
[ENA]
¡û
>WENV182439494
OIJT01000041
[OIJT] human gut metagenome; human gut
35031
35102
+
Gln
CTG
[ENA]
¡û
>WENV182439487
OIJT01000036
[OIJT] human gut metagenome; human gut
38489
38563
+
Thr
TGT
[ENA]
¡û
>WENV182439488
OIJT01000036
[OIJT] human gut metagenome; human gut
38606
38689
+
Tyr
GTA
[ENA]
¡û
>WENV182439497
OIJT01000045
[OIJT] human gut metagenome; human gut
38671
38744
+
fMet
CAT
[ENA]
¡û
>WENV182439489
OIJT01000036
[OIJT] human gut metagenome; human gut
38807
38879
+
Thr
GGT
[ENA]
¡û
>WENV182439490
OIJT01000036
[OIJT] human gut metagenome; human gut
40172
40245
+
Trp
CCA
[ENA]
¡û
>WENV182439482
OIJT01000027
[OIJT] human gut metagenome; human gut
41297
41370
+
Lys
CTT
[ENA]
¡û
>WENV182439483
OIJT01000027
[OIJT] human gut metagenome; human gut
41394
41467
+
Lys
CTT
[ENA]
¡û
>WENV182439484
OIJT01000027
[OIJT] human gut metagenome; human gut
41487
41560
+
Lys
CTT
[ENA]
¡û
>WENV182439479
OIJT01000020
[OIJT] human gut metagenome; human gut
53601
53675
+
Ala
GGC
[ENA]
¡û
>WENV182439486
OIJT01000031
[OIJT] human gut metagenome; human gut
55242
55170
-
Glu
TTC
[ENA]
¡û
>WENV182439471
OIJT01000008
[OIJT] human gut metagenome; human gut
87462
87533
+
Gln
TTG
[ENA]
¡û
>WENV182439473
OIJT01000009
[OIJT] human gut metagenome; human gut
100590
100515
-
Phe
GAA
[ENA]
¡û
>WENV182439472
OIJT01000009
[OIJT] human gut metagenome; human gut
100771
100844
+
Pro
CGG
[ENA]
¡û
>WENV182439470
OIJT01000007
[OIJT] human gut metagenome; human gut
117772
117698
-
Glu
CTC
[ENA]
¡û
>WENV182439469
OIJT01000005
[OIJT] human gut metagenome; human gut
132725
132651
-
Met
CAT
[ENA]
¡û
>WENV182439467
OIJT01000003
[OIJT] human gut metagenome; human gut
158558
158486
-
Arg
CCG
[ENA]
¡û
>WENV182439468
OIJT01000004
[OIJT] human gut metagenome; human gut
161581
161508
-
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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