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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OISN] human gut metagenome; human gut
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182491879
OISN01000405
[OISN] human gut metagenome; human gut
63
139
+
Asp
GTC
[ENA]
¡û
>WENV182491869
OISN01000177
[OISN] human gut metagenome; human gut
83
7
-
Arg
CCG
[ENA]
¡û
>WENV182491873
OISN01000288
[OISN] human gut metagenome; human gut
90
176
+
Leu
CAG
[ENA]
¡û
>WENV182491895
OISN01002428
[OISN] human gut metagenome; human gut
105
30
-
Thr
GGT
[ENA]
¡û
>WENV182491903
OISN01002791
[OISN] human gut metagenome; human gut
117
45
-
Trp
CCA
[ENA]
¡û
>WENV182491909
OISN01003875
[OISN] human gut metagenome; human gut
121
46
-
Arg
ACG
[ENA]
¡û
>WENV182491880
OISN01000405
[OISN] human gut metagenome; human gut
148
223
+
Trp
CCA
[ENA]
¡û
>WENV182491896
OISN01002498
[OISN] human gut metagenome; human gut
150
58
-
Ser
GCT
[ENA]
¡û
>WENV182491891
OISN01001888
[OISN] human gut metagenome; human gut
180
106
-
Gln
CTG
[ENA]
¡û
>WENV182491894
OISN01002428
[OISN] human gut metagenome; human gut
186
112
-
Gly
TCC
[ENA]
¡û
>WENV182491902
OISN01002791
[OISN] human gut metagenome; human gut
206
124
-
Tyr
GTA
[ENA]
¡û
>WENV182491908
OISN01003875
[OISN] human gut metagenome; human gut
217
132
-
Leu
TAA
[ENA]
¡û
>WENV182491874
OISN01000288
[OISN] human gut metagenome; human gut
219
295
+
Pro
TGG
[ENA]
¡û
>WENV182491876
OISN01000382
[OISN] human gut metagenome; human gut
241
165
-
Pro
GGG
[ENA]
¡û
>WENV182491897
OISN01002676
[OISN] human gut metagenome; human gut
242
317
+
Ile2
CAT
[ENA]
¡û
>WENV182491886
OISN01001243
[OISN] human gut metagenome; human gut
270
345
+
Asn
GTT
[ENA]
¡û
>WENV182491901
OISN01002791
[OISN] human gut metagenome; human gut
282
207
-
Phe
GAA
[ENA]
¡û
>WENV182491907
OISN01003875
[OISN] human gut metagenome; human gut
304
233
-
Gly
GCC
[ENA]
¡û
>WENV182491890
OISN01001888
[OISN] human gut metagenome; human gut
305
229
-
Met
CAT
[ENA]
¡û
>WENV182491884
OISN01001002
[OISN] human gut metagenome; human gut
312
236
-
Arg
TCT
[ENA]
¡û
>WENV182491887
OISN01001584
[OISN] human gut metagenome; human gut
374
447
+
Gly
CCC
[ENA]
¡û
>WENV182491906
OISN01003875
[OISN] human gut metagenome; human gut
382
307
-
Thr
TGT
[ENA]
¡û
>WENV182491893
OISN01002428
[OISN] human gut metagenome; human gut
387
303
-
Tyr
GTA
[ENA]
¡û
>WENV182491900
OISN01002791
[OISN] human gut metagenome; human gut
391
316
-
Asp
GTC
[ENA]
¡û
>WENV182491905
OISN01003875
[OISN] human gut metagenome; human gut
481
398
-
Leu
TAG
[ENA]
¡û
>WENV182491899
OISN01002791
[OISN] human gut metagenome; human gut
484
409
-
fMet
CAT
[ENA]
¡û
>WENV182491904
OISN01002792
[OISN] human gut metagenome; human gut
550
475
-
Ala
GGC
[ENA]
¡û
>WENV182491883
OISN01000905
[OISN] human gut metagenome; human gut
574
488
-
Leu
GAG
[ENA]
¡û
>WENV182491898
OISN01002791
[OISN] human gut metagenome; human gut
592
503
-
Ser
TGA
[ENA]
¡û
>WENV182491881
OISN01000607
[OISN] human gut metagenome; human gut
611
524
-
Ser
TGA
[ENA]
¡û
>WENV182491892
OISN01002066
[OISN] human gut metagenome; human gut
634
559
-
Glu
TTC
[ENA]
¡û
>WENV182491882
OISN01000759
[OISN] human gut metagenome; human gut
728
815
+
Ser
GGA
[ENA]
¡û
>WENV182491889
OISN01001601
[OISN] human gut metagenome; human gut
742
656
-
Leu
TAA
[ENA]
¡û
>WENV182491870
OISN01000183
[OISN] human gut metagenome; human gut
760
835
+
Phe
GAA
[ENA]
¡û
>WENV182491878
OISN01000397
[OISN] human gut metagenome; human gut
780
705
-
Lys
TTT
[ENA]
¡û
>WENV182491885
OISN01001036
[OISN] human gut metagenome; human gut
823
747
-
fMet
CAT
[ENA]
¡û
>WENV182491888
OISN01001601
[OISN] human gut metagenome; human gut
828
755
-
Cys
GCA
[ENA]
¡û
>WENV182491877
OISN01000397
[OISN] human gut metagenome; human gut
857
783
-
Val
TAC
[ENA]
¡û
>WENV182491875
OISN01000380
[OISN] human gut metagenome; human gut
1175
1269
+
SeC
TCA
[ENA]
¡û
>WENV182491868
OISN01000168
[OISN] human gut metagenome; human gut
1661
1736
+
Thr
CGT
[ENA]
¡û
>WENV182491871
OISN01000195
[OISN] human gut metagenome; human gut
1963
2039
+
Ile
GAT
[ENA]
¡û
>WENV182491872
OISN01000195
[OISN] human gut metagenome; human gut
2054
2129
+
Ala
TGC
[ENA]
¡û
>WENV182491867
OISN01000002
[OISN] human gut metagenome; human gut
4659
4584
-
Ala
TGC
[ENA]
¡û
>WENV182491866
OISN01000002
[OISN] human gut metagenome; human gut
4778
4702
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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