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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OKAT] human gut metagenome; human gut
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182821206
OKAT01000090
[OKAT] human gut metagenome; human gut
1
90
+
Ser
TGA
[ENA]
¡û
>WENV182821222
OKAT01000111
[OKAT] human gut metagenome; human gut
37
108
+
Trp
CCA
[ENA]
¡û
>WENV182821223
OKAT01000117
[OKAT] human gut metagenome; human gut
37
108
+
Trp
CCA
[ENA]
¡û
>WENV182821226
OKAT01000156
[OKAT] human gut metagenome; human gut
67
150
+
Tyr
GTA
[ENA]
¡û
>WENV182821220
OKAT01000110
[OKAT] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¡û
>WENV182821207
OKAT01000090
[OKAT] human gut metagenome; human gut
123
198
+
fMet
CAT
[ENA]
¡û
>WENV182821243
OKAT01001084
[OKAT] human gut metagenome; human gut
153
226
+
Gly
GCC
[ENA]
¡û
>WENV182821227
OKAT01000156
[OKAT] human gut metagenome; human gut
154
227
+
Gln
TTG
[ENA]
¡û
>WENV182821221
OKAT01000110
[OKAT] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¡û
>WENV182821177
OKAT01000049
[OKAT] human gut metagenome; human gut
164
78
-
Leu
GAG
[ENA]
¡û
>WENV182821237
OKAT01000515
[OKAT] human gut metagenome; human gut
178
252
+
His
GTG
[ENA]
¡û
>WENV182821228
OKAT01000156
[OKAT] human gut metagenome; human gut
232
305
+
Cys
GCA
[ENA]
¡û
>WENV182821208
OKAT01000090
[OKAT] human gut metagenome; human gut
236
312
+
Asp
GTC
[ENA]
¡û
>WENV182821244
OKAT01001084
[OKAT] human gut metagenome; human gut
248
319
+
Cys
GCA
[ENA]
¡û
>WENV182821248
OKAT01001360
[OKAT] human gut metagenome; human gut
271
196
-
Ala
TGC
[ENA]
¡û
>WENV182821246
OKAT01001326
[OKAT] human gut metagenome; human gut
282
357
+
Thr
CGT
[ENA]
¡û
>WENV182821186
OKAT01000073
[OKAT] human gut metagenome; human gut
297
213
-
Tyr
GTA
[ENA]
¡û
>WENV182821209
OKAT01000090
[OKAT] human gut metagenome; human gut
314
384
+
Gly
TCC
[ENA]
¡û
>WENV182821241
OKAT01000960
[OKAT] human gut metagenome; human gut
363
457
+
SeC
TCA
[ENA]
¡û
>WENV182821245
OKAT01001084
[OKAT] human gut metagenome; human gut
365
439
+
Val
GAC
[ENA]
¡û
>WENV182821231
OKAT01000319
[OKAT] human gut metagenome; human gut
389
474
+
Ser
GGA
[ENA]
¡û
>WENV182821210
OKAT01000090
[OKAT] human gut metagenome; human gut
393
468
+
Ile
GAT
[ENA]
¡û
>WENV182821238
OKAT01000517
[OKAT] human gut metagenome; human gut
408
335
-
Arg
CCT
[ENA]
¡û
>WENV182821234
OKAT01000458
[OKAT] human gut metagenome; human gut
410
498
+
Ser
TGA
[ENA]
¡û
>WENV182821229
OKAT01000156
[OKAT] human gut metagenome; human gut
430
513
+
Leu
CAA
[ENA]
¡û
>WENV182821236
OKAT01000514
[OKAT] human gut metagenome; human gut
451
378
-
Gly
TCC
[ENA]
¡û
>WENV182821247
OKAT01001360
[OKAT] human gut metagenome; human gut
462
386
-
Ile
GAT
[ENA]
¡û
>WENV182821211
OKAT01000090
[OKAT] human gut metagenome; human gut
481
554
+
Glu
TTC
[ENA]
¡û
>WENV182821242
OKAT01001074
[OKAT] human gut metagenome; human gut
551
624
+
Trp
CCA
[ENA]
¡û
>WENV182821182
OKAT01000069
[OKAT] human gut metagenome; human gut
562
487
-
Thr
CGT
[ENA]
¡û
>WENV182821212
OKAT01000090
[OKAT] human gut metagenome; human gut
566
655
+
Ser
TGA
[ENA]
¡û
>WENV182821138
OKAT01000012
[OKAT] human gut metagenome; human gut
611
685
+
Val
TAC
[ENA]
¡û
>WENV182821230
OKAT01000315
[OKAT] human gut metagenome; human gut
643
567
-
Pro
CGG
[ENA]
¡û
>WENV182821235
OKAT01000514
[OKAT] human gut metagenome; human gut
650
724
+
Pro
TGG
[ENA]
¡û
>WENV182821213
OKAT01000090
[OKAT] human gut metagenome; human gut
688
763
+
fMet
CAT
[ENA]
¡û
>WENV182821139
OKAT01000012
[OKAT] human gut metagenome; human gut
690
764
+
Lys
TTT
[ENA]
¡û
>WENV182821225
OKAT01000126
[OKAT] human gut metagenome; human gut
738
827
+
Ser
CGA
[ENA]
¡û
>WENV182821239
OKAT01000584
[OKAT] human gut metagenome; human gut
766
842
+
Val
TAC
[ENA]
¡û
>WENV182821140
OKAT01000012
[OKAT] human gut metagenome; human gut
779
862
+
Leu
TAG
[ENA]
¡û
>WENV182821214
OKAT01000090
[OKAT] human gut metagenome; human gut
810
885
+
Asp
GTC
[ENA]
¡û
>WENV182821240
OKAT01000625
[OKAT] human gut metagenome; human gut
811
738
-
Glu
TTC
[ENA]
¡û
>WENV182821141
OKAT01000012
[OKAT] human gut metagenome; human gut
868
943
+
Thr
TGT
[ENA]
¡û
>WENV182821215
OKAT01000090
[OKAT] human gut metagenome; human gut
889
966
+
Phe
GAA
[ENA]
¡û
>WENV182821233
OKAT01000397
[OKAT] human gut metagenome; human gut
938
1020
+
Leu
TAG
[ENA]
¡û
>WENV182821142
OKAT01000012
[OKAT] human gut metagenome; human gut
948
1019
+
Gly
GCC
[ENA]
¡û
>WENV182821216
OKAT01000090
[OKAT] human gut metagenome; human gut
977
1047
+
Gly
TCC
[ENA]
¡û
>WENV182821143
OKAT01000012
[OKAT] human gut metagenome; human gut
1035
1120
+
Leu
TAA
[ENA]
¡û
>WENV182821217
OKAT01000090
[OKAT] human gut metagenome; human gut
1056
1131
+
Ile
GAT
[ENA]
¡û
>WENV182821144
OKAT01000012
[OKAT] human gut metagenome; human gut
1135
1208
+
Arg
ACG
[ENA]
¡û
>WENV182821218
OKAT01000090
[OKAT] human gut metagenome; human gut
1140
1229
+
Ser
GCT
[ENA]
¡û
>WENV182821219
OKAT01000090
[OKAT] human gut metagenome; human gut
1243
1316
+
Glu
TTC
[ENA]
¡û
>WENV182821232
OKAT01000325
[OKAT] human gut metagenome; human gut
1244
1171
-
Gly
CCC
[ENA]
¡û
>WENV182821145
OKAT01000012
[OKAT] human gut metagenome; human gut
1298
1371
+
Pro
TGG
[ENA]
¡û
>WENV182821169
OKAT01000040
[OKAT] human gut metagenome; human gut
2593
2522
-
Trp
CCA
[ENA]
¡û
>WENV182821224
OKAT01000119
[OKAT] human gut metagenome; human gut
3743
3668
-
Ile2
CAT
[ENA]
¡û
>WENV182821164
OKAT01000028
[OKAT] human gut metagenome; human gut
6177
6104
-
Lys
CTT
[ENA]
¡û
>WENV182821204
OKAT01000084
[OKAT] human gut metagenome; human gut
10325
10411
+
Leu
CAG
[ENA]
¡û
>WENV182821116
OKAT01000001
[OKAT] human gut metagenome; human gut
13357
13282
-
Asn
GTT
[ENA]
¡û
>WENV182821194
OKAT01000075
[OKAT] human gut metagenome; human gut
14692
14602
-
Ser
GGA
[ENA]
¡û
>WENV182821193
OKAT01000075
[OKAT] human gut metagenome; human gut
14816
14743
-
Glu
TTC
[ENA]
¡û
>WENV182821192
OKAT01000075
[OKAT] human gut metagenome; human gut
14891
14817
-
Asn
GTT
[ENA]
¡û
>WENV182821191
OKAT01000075
[OKAT] human gut metagenome; human gut
14974
14901
-
Gly
TCC
[ENA]
¡û
>WENV182821190
OKAT01000075
[OKAT] human gut metagenome; human gut
15067
14992
-
His
GTG
[ENA]
¡û
>WENV182821189
OKAT01000075
[OKAT] human gut metagenome; human gut
15154
15080
-
Phe
GAA
[ENA]
¡û
>WENV182821188
OKAT01000075
[OKAT] human gut metagenome; human gut
15239
15164
-
Asp
GTC
[ENA]
¡û
>WENV182821187
OKAT01000075
[OKAT] human gut metagenome; human gut
15327
15254
-
fMet
CAT
[ENA]
¡û
>WENV182821205
OKAT01000085
[OKAT] human gut metagenome; human gut
17816
17740
-
Arg
TCT
[ENA]
¡û
>WENV182821184
OKAT01000071
[OKAT] human gut metagenome; human gut
20813
20887
+
Arg
CCT
[ENA]
¡û
>WENV182821114
OKAT01000001
[OKAT] human gut metagenome; human gut
22644
22719
+
Asn
GTT
[ENA]
¡û
>WENV182821196
OKAT01000077
[OKAT] human gut metagenome; human gut
29825
29749
-
fMet
CAT
[ENA]
¡û
>WENV182821181
OKAT01000069
[OKAT] human gut metagenome; human gut
35410
35334
-
Asp
GTC
[ENA]
¡û
>WENV182821197
OKAT01000079
[OKAT] human gut metagenome; human gut
38246
38173
-
Ile2
CAT
[ENA]
¡û
>WENV182821198
OKAT01000080
[OKAT] human gut metagenome; human gut
38936
39011
+
Val
TAC
[ENA]
¡û
>WENV182821199
OKAT01000080
[OKAT] human gut metagenome; human gut
39018
39093
+
Thr
TGT
[ENA]
¡û
>WENV182821200
OKAT01000080
[OKAT] human gut metagenome; human gut
39099
39173
+
Lys
TTT
[ENA]
¡û
>WENV182821201
OKAT01000080
[OKAT] human gut metagenome; human gut
39191
39265
+
Gly
GCC
[ENA]
¡û
>WENV182821202
OKAT01000080
[OKAT] human gut metagenome; human gut
39277
39365
+
Leu
TAA
[ENA]
¡û
>WENV182821203
OKAT01000080
[OKAT] human gut metagenome; human gut
39378
39454
+
Arg
ACG
[ENA]
¡û
>WENV182821195
OKAT01000077
[OKAT] human gut metagenome; human gut
39966
39880
-
Leu
GAG
[ENA]
¡û
>WENV182821162
OKAT01000027
[OKAT] human gut metagenome; human gut
40909
40983
+
Asn
GTT
[ENA]
¡û
>WENV182821163
OKAT01000027
[OKAT] human gut metagenome; human gut
40986
41076
+
Ser
GCT
[ENA]
¡û
>WENV182821185
OKAT01000071
[OKAT] human gut metagenome; human gut
41658
41583
-
Ala
GGC
[ENA]
¡û
>WENV182821183
OKAT01000070
[OKAT] human gut metagenome; human gut
44481
44406
-
Asn
GTT
[ENA]
¡û
>WENV182821166
OKAT01000038
[OKAT] human gut metagenome; human gut
47855
47931
+
Val
GAC
[ENA]
¡û
>WENV182821167
OKAT01000038
[OKAT] human gut metagenome; human gut
47940
48016
+
Val
GAC
[ENA]
¡û
>WENV182821150
OKAT01000015
[OKAT] human gut metagenome; human gut
48701
48626
-
Lys
CTT
[ENA]
¡û
>WENV182821136
OKAT01000011
[OKAT] human gut metagenome; human gut
52320
52404
+
Leu
CAA
[ENA]
¡û
>WENV182821179
OKAT01000063
[OKAT] human gut metagenome; human gut
53028
53120
+
Ser
GCT
[ENA]
¡û
>WENV182821180
OKAT01000063
[OKAT] human gut metagenome; human gut
53125
53201
+
Arg
ACG
[ENA]
¡û
>WENV182821168
OKAT01000040
[OKAT] human gut metagenome; human gut
56852
56924
+
Thr
GGT
[ENA]
¡û
>WENV182821174
OKAT01000043
[OKAT] human gut metagenome; human gut
58418
58342
-
Pro
TGG
[ENA]
¡û
>WENV182821173
OKAT01000043
[OKAT] human gut metagenome; human gut
58548
58462
-
Leu
CAG
[ENA]
¡û
>WENV182821172
OKAT01000043
[OKAT] human gut metagenome; human gut
58645
58570
-
His
GTG
[ENA]
¡û
>WENV182821171
OKAT01000043
[OKAT] human gut metagenome; human gut
58790
58714
-
Arg
CCG
[ENA]
¡û
>WENV182821178
OKAT01000055
[OKAT] human gut metagenome; human gut
58999
58912
-
Ser
TGA
[ENA]
¡û
>WENV182821165
OKAT01000036
[OKAT] human gut metagenome; human gut
61053
60982
-
Arg
CCG
[ENA]
¡û
>WENV182821156
OKAT01000022
[OKAT] human gut metagenome; human gut
62643
62554
-
Ser
CGA
[ENA]
¡û
>WENV182821154
OKAT01000022
[OKAT] human gut metagenome; human gut
63634
63709
+
Asn
GTT
[ENA]
¡û
>WENV182821151
OKAT01000017
[OKAT] human gut metagenome; human gut
67442
67537
+
SeC
TCA
[ENA]
¡û
>WENV182821137
OKAT01000011
[OKAT] human gut metagenome; human gut
77694
77619
-
Ile2
CAT
[ENA]
¡û
>WENV182821176
OKAT01000046
[OKAT] human gut metagenome; human gut
81988
82080
+
Ser
TGA
[ENA]
¡û
>WENV182821155
OKAT01000022
[OKAT] human gut metagenome; human gut
87912
87987
+
Asn
GTT
[ENA]
¡û
>WENV182821121
OKAT01000005
[OKAT] human gut metagenome; human gut
91311
91387
+
fMet
CAT
[ENA]
¡û
>WENV182821175
OKAT01000045
[OKAT] human gut metagenome; human gut
91528
91602
+
Arg
TCT
[ENA]
¡û
>WENV182821170
OKAT01000043
[OKAT] human gut metagenome; human gut
93109
93034
-
Trp
CCA
[ENA]
¡û
>WENV182821152
OKAT01000020
[OKAT] human gut metagenome; human gut
94540
94627
+
Ser
GGA
[ENA]
¡û
>WENV182821153
OKAT01000020
[OKAT] human gut metagenome; human gut
97436
97523
+
Ser
GGA
[ENA]
¡û
>WENV182821131
OKAT01000006
[OKAT] human gut metagenome; human gut
110470
110396
-
Gln
CTG
[ENA]
¡û
>WENV182821130
OKAT01000006
[OKAT] human gut metagenome; human gut
110565
110489
-
Met
CAT
[ENA]
¡û
>WENV182821129
OKAT01000006
[OKAT] human gut metagenome; human gut
110687
110613
-
Gln
TTG
[ENA]
¡û
>WENV182821128
OKAT01000006
[OKAT] human gut metagenome; human gut
110795
110711
-
Leu
TAG
[ENA]
¡û
>WENV182821127
OKAT01000006
[OKAT] human gut metagenome; human gut
110880
110804
-
Met
CAT
[ENA]
¡û
>WENV182821157
OKAT01000025
[OKAT] human gut metagenome; human gut
122392
122468
+
Pro
CGG
[ENA]
¡û
>WENV182821158
OKAT01000025
[OKAT] human gut metagenome; human gut
124633
124708
+
Thr
TGT
[ENA]
¡û
>WENV182821159
OKAT01000025
[OKAT] human gut metagenome; human gut
124717
124801
+
Tyr
GTA
[ENA]
¡û
>WENV182821160
OKAT01000025
[OKAT] human gut metagenome; human gut
124915
124989
+
Gly
TCC
[ENA]
¡û
>WENV182821161
OKAT01000025
[OKAT] human gut metagenome; human gut
124995
125070
+
Thr
GGT
[ENA]
¡û
>WENV182821149
OKAT01000014
[OKAT] human gut metagenome; human gut
132451
132376
-
Arg
TCT
[ENA]
¡û
>WENV182821147
OKAT01000013
[OKAT] human gut metagenome; human gut
161692
161617
-
Gly
GCC
[ENA]
¡û
>WENV182821123
OKAT01000005
[OKAT] human gut metagenome; human gut
178652
178579
-
Gly
CCC
[ENA]
¡û
>WENV182821148
OKAT01000014
[OKAT] human gut metagenome; human gut
181788
181863
+
Arg
CCT
[ENA]
¡û
>WENV182821135
OKAT01000010
[OKAT] human gut metagenome; human gut
182227
182141
-
Leu
TAA
[ENA]
¡û
>WENV182821134
OKAT01000010
[OKAT] human gut metagenome; human gut
182314
182241
-
Cys
GCA
[ENA]
¡û
>WENV182821133
OKAT01000010
[OKAT] human gut metagenome; human gut
182430
182355
-
Gly
GCC
[ENA]
¡û
>WENV182821146
OKAT01000013
[OKAT] human gut metagenome; human gut
187162
187237
+
Phe
GAA
[ENA]
¡û
>WENV182821124
OKAT01000006
[OKAT] human gut metagenome; human gut
195914
195989
+
Lys
TTT
[ENA]
¡û
>WENV182821125
OKAT01000006
[OKAT] human gut metagenome; human gut
196107
196182
+
Val
TAC
[ENA]
¡û
>WENV182821126
OKAT01000006
[OKAT] human gut metagenome; human gut
196187
196262
+
Lys
TTT
[ENA]
¡û
>WENV182821132
OKAT01000007
[OKAT] human gut metagenome; human gut
222532
222460
-
Thr
CGT
[ENA]
¡û
>WENV182821117
OKAT01000002
[OKAT] human gut metagenome; human gut
237448
237534
+
Leu
GAG
[ENA]
¡û
>WENV182821118
OKAT01000002
[OKAT] human gut metagenome; human gut
248781
248863
+
Tyr
GTA
[ENA]
¡û
>WENV182821119
OKAT01000002
[OKAT] human gut metagenome; human gut
248871
248944
+
Gln
TTG
[ENA]
¡û
>WENV182821115
OKAT01000001
[OKAT] human gut metagenome; human gut
248983
249059
+
Pro
GGG
[ENA]
¡û
>WENV182821122
OKAT01000005
[OKAT] human gut metagenome; human gut
254055
254130
+
Phe
GAA
[ENA]
¡û
>WENV182821120
OKAT01000004
[OKAT] human gut metagenome; human gut
260878
260805
-
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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