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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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HOW TO USE
tRNA gene List
[OKHV] human gut metagenome; human gut
HIT:
142 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182841478
OKHV01001238
[OKHV] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¡û
>WENV182841474
OKHV01000861
[OKHV] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¡û
>WENV182841414
OKHV01000060
[OKHV] human gut metagenome; human gut
90
165
+
Ala
GGC
[ENA]
¡û
>WENV182841494
OKHV01002062
[OKHV] human gut metagenome; human gut
134
58
-
Arg
TCT
[ENA]
¡û
>WENV182841487
OKHV01001936
[OKHV] human gut metagenome; human gut
136
61
-
Lys
CTT
[ENA]
¡û
>WENV182841479
OKHV01001238
[OKHV] human gut metagenome; human gut
176
266
+
Ser
GGA
[ENA]
¡û
>WENV182841386
OKHV01000024
[OKHV] human gut metagenome; human gut
184
111
-
Asn
GTT
[ENA]
¡û
>WENV182841477
OKHV01001041
[OKHV] human gut metagenome; human gut
197
126
-
Trp
CCA
[ENA]
¡û
>WENV182841396
OKHV01000029
[OKHV] human gut metagenome; human gut
214
139
-
His
GTG
[ENA]
¡û
>WENV182841493
OKHV01002062
[OKHV] human gut metagenome; human gut
218
145
-
Gly
TCC
[ENA]
¡û
>WENV182841480
OKHV01001238
[OKHV] human gut metagenome; human gut
282
355
+
Glu
TTC
[ENA]
¡û
>WENV182841492
OKHV01002062
[OKHV] human gut metagenome; human gut
299
225
-
Gly
GCC
[ENA]
¡û
>WENV182841481
OKHV01001238
[OKHV] human gut metagenome; human gut
367
456
+
Ser
TGA
[ENA]
¡û
>WENV182841491
OKHV01002062
[OKHV] human gut metagenome; human gut
386
303
-
Leu
TAG
[ENA]
¡û
>WENV182841486
OKHV01001389
[OKHV] human gut metagenome; human gut
429
353
-
Arg
TCT
[ENA]
¡û
>WENV182841476
OKHV01000977
[OKHV] human gut metagenome; human gut
442
353
-
Ser
CGA
[ENA]
¡û
>WENV182841490
OKHV01002062
[OKHV] human gut metagenome; human gut
467
392
-
Lys
TTT
[ENA]
¡û
>WENV182841482
OKHV01001238
[OKHV] human gut metagenome; human gut
489
564
+
fMet
CAT
[ENA]
¡û
>WENV182841489
OKHV01002062
[OKHV] human gut metagenome; human gut
545
471
-
Gln
TTG
[ENA]
¡û
>WENV182841464
OKHV01000605
[OKHV] human gut metagenome; human gut
563
637
+
Val
TAC
[ENA]
¡û
>WENV182841473
OKHV01000740
[OKHV] human gut metagenome; human gut
576
501
-
Arg
TCT
[ENA]
¡û
>WENV182841472
OKHV01000701
[OKHV] human gut metagenome; human gut
577
652
+
Thr
GGT
[ENA]
¡û
>WENV182841483
OKHV01001238
[OKHV] human gut metagenome; human gut
602
678
+
Asp
GTC
[ENA]
¡û
>WENV182841488
OKHV01002062
[OKHV] human gut metagenome; human gut
626
551
-
His
GTG
[ENA]
¡û
>WENV182841465
OKHV01000605
[OKHV] human gut metagenome; human gut
642
716
+
Lys
TTT
[ENA]
¡û
>WENV182841438
OKHV01000134
[OKHV] human gut metagenome; human gut
648
727
+
Gln
TTG
[ENA]
¡û
>WENV182841484
OKHV01001238
[OKHV] human gut metagenome; human gut
680
750
+
Gly
TCC
[ENA]
¡û
>WENV182841466
OKHV01000605
[OKHV] human gut metagenome; human gut
731
814
+
Leu
TAG
[ENA]
¡û
>WENV182841485
OKHV01001238
[OKHV] human gut metagenome; human gut
764
840
+
Ile
GAT
[ENA]
¡û
>WENV182841467
OKHV01000605
[OKHV] human gut metagenome; human gut
820
895
+
Thr
TGT
[ENA]
¡û
>WENV182841468
OKHV01000605
[OKHV] human gut metagenome; human gut
900
971
+
Gly
GCC
[ENA]
¡û
>WENV182841469
OKHV01000605
[OKHV] human gut metagenome; human gut
987
1072
+
Leu
TAA
[ENA]
¡û
>WENV182841470
OKHV01000605
[OKHV] human gut metagenome; human gut
1087
1160
+
Arg
ACG
[ENA]
¡û
>WENV182841439
OKHV01000139
[OKHV] human gut metagenome; human gut
1187
1115
-
Thr
CGT
[ENA]
¡û
>WENV182841471
OKHV01000605
[OKHV] human gut metagenome; human gut
1250
1323
+
Pro
TGG
[ENA]
¡û
>WENV182841475
OKHV01000891
[OKHV] human gut metagenome; human gut
1328
1256
-
Thr
GGT
[ENA]
¡û
>WENV182841462
OKHV01000435
[OKHV] human gut metagenome; human gut
1582
1496
-
Leu
GAG
[ENA]
¡û
>WENV182841442
OKHV01000192
[OKHV] human gut metagenome; human gut
1838
1764
-
Lys
CTT
[ENA]
¡û
>WENV182841423
OKHV01000083
[OKHV] human gut metagenome; human gut
2136
2049
-
Ser
GGA
[ENA]
¡û
>WENV182841459
OKHV01000390
[OKHV] human gut metagenome; human gut
2205
2133
-
Ala
TGC
[ENA]
¡û
>WENV182841393
OKHV01000029
[OKHV] human gut metagenome; human gut
2296
2371
+
Arg
TCT
[ENA]
¡û
>WENV182841446
OKHV01000361
[OKHV] human gut metagenome; human gut
2364
2446
+
Tyr
GTA
[ENA]
¡û
>WENV182841447
OKHV01000361
[OKHV] human gut metagenome; human gut
2450
2523
+
Trp
CCA
[ENA]
¡û
>WENV182841448
OKHV01000361
[OKHV] human gut metagenome; human gut
2560
2633
+
His
GTG
[ENA]
¡û
>WENV182841449
OKHV01000361
[OKHV] human gut metagenome; human gut
2646
2719
+
Gln
TTG
[ENA]
¡û
>WENV182841463
OKHV01000558
[OKHV] human gut metagenome; human gut
2754
2829
+
Ala
GGC
[ENA]
¡û
>WENV182841443
OKHV01000233
[OKHV] human gut metagenome; human gut
3290
3216
-
Leu
TAA
[ENA]
¡û
>WENV182841460
OKHV01000424
[OKHV] human gut metagenome; human gut
3304
3377
+
Arg
CCG
[ENA]
¡û
>WENV182841353
OKHV01000001
[OKHV] human gut metagenome; human gut
3351
3264
-
Ser
GGA
[ENA]
¡û
>WENV182841408
OKHV01000051
[OKHV] human gut metagenome; human gut
3508
3583
+
Thr
TGT
[ENA]
¡û
>WENV182841409
OKHV01000051
[OKHV] human gut metagenome; human gut
3592
3676
+
Tyr
GTA
[ENA]
¡û
>WENV182841410
OKHV01000051
[OKHV] human gut metagenome; human gut
3793
3867
+
Gly
TCC
[ENA]
¡û
>WENV182841411
OKHV01000051
[OKHV] human gut metagenome; human gut
3874
3949
+
Thr
GGT
[ENA]
¡û
>WENV182841458
OKHV01000390
[OKHV] human gut metagenome; human gut
3980
3904
-
Met
CAT
[ENA]
¡û
>WENV182841457
OKHV01000390
[OKHV] human gut metagenome; human gut
4062
3987
-
Phe
GAA
[ENA]
¡û
>WENV182841456
OKHV01000390
[OKHV] human gut metagenome; human gut
4154
4066
-
Ser
TGA
[ENA]
¡û
>WENV182841461
OKHV01000429
[OKHV] human gut metagenome; human gut
4195
4110
-
Leu
CAA
[ENA]
¡û
>WENV182841455
OKHV01000390
[OKHV] human gut metagenome; human gut
4232
4157
-
Lys
TTT
[ENA]
¡û
>WENV182841454
OKHV01000390
[OKHV] human gut metagenome; human gut
4317
4241
-
His
GTG
[ENA]
¡û
>WENV182841453
OKHV01000390
[OKHV] human gut metagenome; human gut
4411
4335
-
Ile2
CAT
[ENA]
¡û
>WENV182841452
OKHV01000390
[OKHV] human gut metagenome; human gut
4511
4423
-
Leu
TAA
[ENA]
¡û
>WENV182841405
OKHV01000041
[OKHV] human gut metagenome; human gut
4617
4688
+
Gly
CCC
[ENA]
¡û
>WENV182841451
OKHV01000390
[OKHV] human gut metagenome; human gut
4715
4642
-
Gly
TCC
[ENA]
¡û
>WENV182841450
OKHV01000390
[OKHV] human gut metagenome; human gut
4809
4725
-
Tyr
GTA
[ENA]
¡û
>WENV182841445
OKHV01000340
[OKHV] human gut metagenome; human gut
5040
4957
-
Leu
TAG
[ENA]
¡û
>WENV182841440
OKHV01000155
[OKHV] human gut metagenome; human gut
5045
5131
+
Leu
GAG
[ENA]
¡û
>WENV182841444
OKHV01000237
[OKHV] human gut metagenome; human gut
5196
5120
-
Arg
TCT
[ENA]
¡û
>WENV182841383
OKHV01000018
[OKHV] human gut metagenome; human gut
6675
6586
-
Ser
CGA
[ENA]
¡û
>WENV182841403
OKHV01000038
[OKHV] human gut metagenome; human gut
6724
6647
-
Phe
GAA
[ENA]
¡û
>WENV182841402
OKHV01000038
[OKHV] human gut metagenome; human gut
6858
6784
-
Asp
GTC
[ENA]
¡û
>WENV182841401
OKHV01000038
[OKHV] human gut metagenome; human gut
7295
7222
-
Glu
TTC
[ENA]
¡û
>WENV182841379
OKHV01000018
[OKHV] human gut metagenome; human gut
7667
7742
+
Asn
GTT
[ENA]
¡û
>WENV182841441
OKHV01000166
[OKHV] human gut metagenome; human gut
8203
8279
+
Asp
GTC
[ENA]
¡û
>WENV182841355
OKHV01000003
[OKHV] human gut metagenome; human gut
9065
9139
+
Pro
GGG
[ENA]
¡û
>WENV182841400
OKHV01000038
[OKHV] human gut metagenome; human gut
9095
9169
+
Lys
TTT
[ENA]
¡û
>WENV182841436
OKHV01000129
[OKHV] human gut metagenome; human gut
9964
10040
+
Pro
CGG
[ENA]
¡û
>WENV182841417
OKHV01000066
[OKHV] human gut metagenome; human gut
10528
10612
+
Leu
CAA
[ENA]
¡û
>WENV182841422
OKHV01000077
[OKHV] human gut metagenome; human gut
11529
11454
-
Thr
CGT
[ENA]
¡û
>WENV182841418
OKHV01000071
[OKHV] human gut metagenome; human gut
11985
12066
+
Tyr
GTA
[ENA]
¡û
>WENV182841419
OKHV01000071
[OKHV] human gut metagenome; human gut
12270
12343
+
Thr
GGT
[ENA]
¡û
>WENV182841377
OKHV01000014
[OKHV] human gut metagenome; human gut
12371
12297
-
Val
CAC
[ENA]
¡û
>WENV182841420
OKHV01000071
[OKHV] human gut metagenome; human gut
12406
12480
+
Met
CAT
[ENA]
¡û
>WENV182841437
OKHV01000133
[OKHV] human gut metagenome; human gut
12774
12699
-
Arg
CCT
[ENA]
¡û
>WENV182841374
OKHV01000014
[OKHV] human gut metagenome; human gut
12870
12943
+
Gly
GCC
[ENA]
¡û
>WENV182841375
OKHV01000014
[OKHV] human gut metagenome; human gut
12971
13042
+
Cys
GCA
[ENA]
¡û
>WENV182841435
OKHV01000112
[OKHV] human gut metagenome; human gut
12991
13074
+
Leu
CAG
[ENA]
¡û
>WENV182841376
OKHV01000014
[OKHV] human gut metagenome; human gut
13043
13117
+
Val
GAC
[ENA]
¡û
>WENV182841390
OKHV01000027
[OKHV] human gut metagenome; human gut
13215
13290
+
Thr
TGT
[ENA]
¡û
>WENV182841407
OKHV01000050
[OKHV] human gut metagenome; human gut
13615
13531
-
Leu
CAA
[ENA]
¡û
>WENV182841425
OKHV01000095
[OKHV] human gut metagenome; human gut
15093
15168
+
Phe
GAA
[ENA]
¡û
>WENV182841424
OKHV01000093
[OKHV] human gut metagenome; human gut
15687
15762
+
Phe
GAA
[ENA]
¡û
>WENV182841426
OKHV01000104
[OKHV] human gut metagenome; human gut
16172
16248
+
Arg
CCG
[ENA]
¡û
>WENV182841427
OKHV01000104
[OKHV] human gut metagenome; human gut
16307
16382
+
His
GTG
[ENA]
¡û
>WENV182841428
OKHV01000104
[OKHV] human gut metagenome; human gut
16403
16489
+
Leu
CAG
[ENA]
¡û
>WENV182841429
OKHV01000104
[OKHV] human gut metagenome; human gut
16532
16608
+
Pro
TGG
[ENA]
¡û
>WENV182841366
OKHV01000009
[OKHV] human gut metagenome; human gut
17188
17274
+
Leu
GAG
[ENA]
¡û
>WENV182841421
OKHV01000071
[OKHV] human gut metagenome; human gut
17597
17670
+
Trp
CCA
[ENA]
¡û
>WENV182841385
OKHV01000022
[OKHV] human gut metagenome; human gut
18279
18366
+
Ser
TGA
[ENA]
¡û
>WENV182841367
OKHV01000009
[OKHV] human gut metagenome; human gut
21055
21131
+
fMet
CAT
[ENA]
¡û
>WENV182841434
OKHV01000105
[OKHV] human gut metagenome; human gut
21260
21186
-
Gln
CTG
[ENA]
¡û
>WENV182841433
OKHV01000105
[OKHV] human gut metagenome; human gut
21385
21309
-
Met
CAT
[ENA]
¡û
>WENV182841432
OKHV01000105
[OKHV] human gut metagenome; human gut
21475
21401
-
Gln
TTG
[ENA]
¡û
>WENV182841431
OKHV01000105
[OKHV] human gut metagenome; human gut
21583
21499
-
Leu
TAG
[ENA]
¡û
>WENV182841430
OKHV01000105
[OKHV] human gut metagenome; human gut
21670
21594
-
Met
CAT
[ENA]
¡û
>WENV182841369
OKHV01000010
[OKHV] human gut metagenome; human gut
23691
23766
+
Thr
CGT
[ENA]
¡û
>WENV182841415
OKHV01000062
[OKHV] human gut metagenome; human gut
27081
27007
-
Ile2
CAT
[ENA]
¡û
>WENV182841398
OKHV01000035
[OKHV] human gut metagenome; human gut
27955
27879
-
Val
GAC
[ENA]
¡û
>WENV182841397
OKHV01000035
[OKHV] human gut metagenome; human gut
28036
27960
-
Val
GAC
[ENA]
¡û
>WENV182841399
OKHV01000036
[OKHV] human gut metagenome; human gut
33187
33102
-
Ser
GGA
[ENA]
¡û
>WENV182841416
OKHV01000065
[OKHV] human gut metagenome; human gut
34828
34744
-
Tyr
GTA
[ENA]
¡û
>WENV182841364
OKHV01000006
[OKHV] human gut metagenome; human gut
35047
34971
-
fMet
CAT
[ENA]
¡û
>WENV182841412
OKHV01000054
[OKHV] human gut metagenome; human gut
38048
38124
+
Pro
CGG
[ENA]
¡û
>WENV182841392
OKHV01000027
[OKHV] human gut metagenome; human gut
38118
38044
-
Arg
CCT
[ENA]
¡û
>WENV182841406
OKHV01000047
[OKHV] human gut metagenome; human gut
40174
40248
+
Arg
CCT
[ENA]
¡û
>WENV182841394
OKHV01000029
[OKHV] human gut metagenome; human gut
42548
42622
+
Pro
TGG
[ENA]
¡û
>WENV182841413
OKHV01000057
[OKHV] human gut metagenome; human gut
43257
43333
+
Ile
GAT
[ENA]
¡û
>WENV182841395
OKHV01000029
[OKHV] human gut metagenome; human gut
43493
43564
+
Gly
TCC
[ENA]
¡û
>WENV182841382
OKHV01000018
[OKHV] human gut metagenome; human gut
47632
47557
-
Asn
GTT
[ENA]
¡û
>WENV182841391
OKHV01000027
[OKHV] human gut metagenome; human gut
48970
49044
+
Ala
CGC
[ENA]
¡û
>WENV182841381
OKHV01000018
[OKHV] human gut metagenome; human gut
50041
49966
-
Asn
GTT
[ENA]
¡û
>WENV182841404
OKHV01000040
[OKHV] human gut metagenome; human gut
51120
51047
-
Ala
GGC
[ENA]
¡û
>WENV182841380
OKHV01000018
[OKHV] human gut metagenome; human gut
51790
51865
+
Asn
GTT
[ENA]
¡û
>WENV182841384
OKHV01000021
[OKHV] human gut metagenome; human gut
56212
56139
-
Ala
TGC
[ENA]
¡û
>WENV182841356
OKHV01000003
[OKHV] human gut metagenome; human gut
57812
57885
+
Arg
CCG
[ENA]
¡û
>WENV182841365
OKHV01000008
[OKHV] human gut metagenome; human gut
58801
58877
+
Arg
TCT
[ENA]
¡û
>WENV182841389
OKHV01000026
[OKHV] human gut metagenome; human gut
60639
60553
-
Leu
TAA
[ENA]
¡û
>WENV182841388
OKHV01000026
[OKHV] human gut metagenome; human gut
60725
60652
-
Cys
GCA
[ENA]
¡û
>WENV182841387
OKHV01000026
[OKHV] human gut metagenome; human gut
60854
60779
-
Gly
GCC
[ENA]
¡û
>WENV182841370
OKHV01000012
[OKHV] human gut metagenome; human gut
61051
61136
+
Ser
TGA
[ENA]
¡û
>WENV182841378
OKHV01000016
[OKHV] human gut metagenome; human gut
65480
65553
+
Gly
CCC
[ENA]
¡û
>WENV182841354
OKHV01000002
[OKHV] human gut metagenome; human gut
65889
65983
+
SeC
TCA
[ENA]
¡û
>WENV182841371
OKHV01000012
[OKHV] human gut metagenome; human gut
68717
68807
+
Ser
GCT
[ENA]
¡û
>WENV182841372
OKHV01000012
[OKHV] human gut metagenome; human gut
69016
69089
+
Arg
ACG
[ENA]
¡û
>WENV182841373
OKHV01000012
[OKHV] human gut metagenome; human gut
80074
80160
+
Ser
CGA
[ENA]
¡û
>WENV182841357
OKHV01000003
[OKHV] human gut metagenome; human gut
81956
82032
+
fMet
CAT
[ENA]
¡û
>WENV182841361
OKHV01000004
[OKHV] human gut metagenome; human gut
100853
100777
-
Pro
GGG
[ENA]
¡û
>WENV182841368
OKHV01000009
[OKHV] human gut metagenome; human gut
116781
116706
-
Ile2
CAT
[ENA]
¡û
>WENV182841358
OKHV01000003
[OKHV] human gut metagenome; human gut
147142
147217
+
Val
TAC
[ENA]
¡û
>WENV182841362
OKHV01000006
[OKHV] human gut metagenome; human gut
156016
156108
+
Ser
GCT
[ENA]
¡û
>WENV182841363
OKHV01000006
[OKHV] human gut metagenome; human gut
156112
156188
+
Arg
ACG
[ENA]
¡û
>WENV182841360
OKHV01000003
[OKHV] human gut metagenome; human gut
157273
157198
-
Glu
CTC
[ENA]
¡û
>WENV182841359
OKHV01000003
[OKHV] human gut metagenome; human gut
157481
157409
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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