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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKKO] human gut metagenome; human gut
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182849235
OKKO01004202
[OKKO] human gut metagenome; human gut
40
115
+
Pro
TGG
[ENA]
¡û
>WENV182849142
OKKO01000033
[OKKO] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¡û
>WENV182849155
OKKO01000054
[OKKO] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¡û
>WENV182849222
OKKO01002532
[OKKO] human gut metagenome; human gut
80
156
+
Lys
CTT
[ENA]
¡û
>WENV182849217
OKKO01002304
[OKKO] human gut metagenome; human gut
127
202
+
Ala
GGC
[ENA]
¡û
>WENV182849194
OKKO01000579
[OKKO] human gut metagenome; human gut
132
58
-
fMet
CAT
[ENA]
¡û
>WENV182849236
OKKO01004202
[OKKO] human gut metagenome; human gut
132
205
+
Gly
TCC
[ENA]
¡û
>WENV182849143
OKKO01000033
[OKKO] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¡û
>WENV182849243
OKKO01004415
[OKKO] human gut metagenome; human gut
154
81
-
Thr
GGT
[ENA]
¡û
>WENV182849156
OKKO01000054
[OKKO] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¡û
>WENV182849225
OKKO01002608
[OKKO] human gut metagenome; human gut
174
246
+
Gln
CTG
[ENA]
¡û
>WENV182849219
OKKO01002526
[OKKO] human gut metagenome; human gut
197
270
+
Glu
TTC
[ENA]
¡û
>WENV182849245
OKKO01005044
[OKKO] human gut metagenome; human gut
201
126
-
Val
TAC
[ENA]
¡û
>WENV182849237
OKKO01004202
[OKKO] human gut metagenome; human gut
209
285
+
Arg
TCT
[ENA]
¡û
>WENV182849199
OKKO01000851
[OKKO] human gut metagenome; human gut
221
295
+
Lys
CTT
[ENA]
¡û
>WENV182849210
OKKO01001595
[OKKO] human gut metagenome; human gut
234
161
-
Thr
CGT
[ENA]
¡û
>WENV182849144
OKKO01000033
[OKKO] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¡û
>WENV182849234
OKKO01003945
[OKKO] human gut metagenome; human gut
270
342
+
Gly
CCC
[ENA]
¡û
>WENV182849206
OKKO01001154
[OKKO] human gut metagenome; human gut
270
345
+
Thr
CGT
[ENA]
¡û
>WENV182849218
OKKO01002304
[OKKO] human gut metagenome; human gut
272
345
+
Ala
GGC
[ENA]
¡û
>WENV182849216
OKKO01002286
[OKKO] human gut metagenome; human gut
274
190
-
Leu
CAA
[ENA]
¡û
>WENV182849226
OKKO01002608
[OKKO] human gut metagenome; human gut
278
352
+
Glu
CTC
[ENA]
¡û
>WENV182849238
OKKO01004202
[OKKO] human gut metagenome; human gut
292
367
+
His
GTG
[ENA]
¡û
>WENV182849231
OKKO01003640
[OKKO] human gut metagenome; human gut
299
226
-
Arg
CCT
[ENA]
¡û
>WENV182849205
OKKO01001114
[OKKO] human gut metagenome; human gut
304
379
+
His
GTG
[ENA]
¡û
>WENV182849145
OKKO01000033
[OKKO] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¡û
>WENV182849242
OKKO01004415
[OKKO] human gut metagenome; human gut
330
248
-
Tyr
GTA
[ENA]
¡û
>WENV182849208
OKKO01001564
[OKKO] human gut metagenome; human gut
332
258
-
Pro
CGG
[ENA]
¡û
>WENV182849207
OKKO01001241
[OKKO] human gut metagenome; human gut
337
254
-
Leu
TAG
[ENA]
¡û
>WENV182849230
OKKO01003146
[OKKO] human gut metagenome; human gut
356
442
+
Leu
GAG
[ENA]
¡û
>WENV182849232
OKKO01003833
[OKKO] human gut metagenome; human gut
370
444
+
Lys
TTT
[ENA]
¡û
>WENV182849239
OKKO01004202
[OKKO] human gut metagenome; human gut
373
447
+
Gln
TTG
[ENA]
¡û
>WENV182849209
OKKO01001567
[OKKO] human gut metagenome; human gut
392
306
-
Leu
CAA
[ENA]
¡û
>WENV182849146
OKKO01000033
[OKKO] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¡û
>WENV182849211
OKKO01001652
[OKKO] human gut metagenome; human gut
409
322
-
Ser
GGA
[ENA]
¡û
>WENV182849228
OKKO01002742
[OKKO] human gut metagenome; human gut
414
488
+
Pro
TGG
[ENA]
¡û
>WENV182849227
OKKO01002701
[OKKO] human gut metagenome; human gut
429
508
+
Gln
TTG
[ENA]
¡û
>WENV182849240
OKKO01004202
[OKKO] human gut metagenome; human gut
452
527
+
Lys
TTT
[ENA]
¡û
>WENV182849246
OKKO01005075
[OKKO] human gut metagenome; human gut
480
406
-
Met
CAT
[ENA]
¡û
>WENV182849147
OKKO01000033
[OKKO] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¡û
>WENV182849244
OKKO01004725
[OKKO] human gut metagenome; human gut
499
423
-
Leu
TAA
[ENA]
¡û
>WENV182849241
OKKO01004202
[OKKO] human gut metagenome; human gut
536
619
+
Leu
TAG
[ENA]
¡û
>WENV182849204
OKKO01001098
[OKKO] human gut metagenome; human gut
544
468
-
Ile2
CAT
[ENA]
¡û
>WENV182849224
OKKO01002581
[OKKO] human gut metagenome; human gut
546
619
+
Ala
GGC
[ENA]
¡û
>WENV182849233
OKKO01003879
[OKKO] human gut metagenome; human gut
578
504
-
Val
CAC
[ENA]
¡û
>WENV182849148
OKKO01000033
[OKKO] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¡û
>WENV182849220
OKKO01002526
[OKKO] human gut metagenome; human gut
634
708
+
Asp
GTC
[ENA]
¡û
>WENV182849215
OKKO01002239
[OKKO] human gut metagenome; human gut
643
728
+
Ser
GGA
[ENA]
¡û
>WENV182849200
OKKO01000949
[OKKO] human gut metagenome; human gut
717
791
+
Arg
CCT
[ENA]
¡û
>WENV182849149
OKKO01000033
[OKKO] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¡û
>WENV182849214
OKKO01002210
[OKKO] human gut metagenome; human gut
767
677
-
Leu
GAG
[ENA]
¡û
>WENV182849221
OKKO01002526
[OKKO] human gut metagenome; human gut
768
845
+
Phe
GAA
[ENA]
¡û
>WENV182849229
OKKO01002898
[OKKO] human gut metagenome; human gut
801
730
-
Gly
CCC
[ENA]
¡û
>WENV182849196
OKKO01000737
[OKKO] human gut metagenome; human gut
828
903
+
Thr
TGT
[ENA]
¡û
>WENV182849213
OKKO01002074
[OKKO] human gut metagenome; human gut
850
763
-
Leu
CAG
[ENA]
¡û
>WENV182849180
OKKO01000260
[OKKO] human gut metagenome; human gut
859
932
+
Ala
CGC
[ENA]
¡û
>WENV182849223
OKKO01002532
[OKKO] human gut metagenome; human gut
868
784
-
Leu
TAG
[ENA]
¡û
>WENV182849182
OKKO01000332
[OKKO] human gut metagenome; human gut
868
943
+
Arg
CCG
[ENA]
¡û
>WENV182849195
OKKO01000686
[OKKO] human gut metagenome; human gut
910
836
-
Val
TAC
[ENA]
¡û
>WENV182849212
OKKO01001770
[OKKO] human gut metagenome; human gut
1004
1077
+
Trp
CCA
[ENA]
¡û
>WENV182849202
OKKO01000990
[OKKO] human gut metagenome; human gut
1087
1013
-
Pro
TGG
[ENA]
¡û
>WENV182849203
OKKO01001098
[OKKO] human gut metagenome; human gut
1159
1231
+
Asn
GTT
[ENA]
¡û
>WENV182849201
OKKO01000990
[OKKO] human gut metagenome; human gut
1163
1236
+
Gly
TCC
[ENA]
¡û
>WENV182849197
OKKO01000764
[OKKO] human gut metagenome; human gut
1208
1137
-
Arg
CCG
[ENA]
¡û
>WENV182849198
OKKO01000844
[OKKO] human gut metagenome; human gut
1484
1558
+
Pro
GGG
[ENA]
¡û
>WENV182849188
OKKO01000351
[OKKO] human gut metagenome; human gut
1647
1574
-
Lys
TTT
[ENA]
¡û
>WENV182849187
OKKO01000351
[OKKO] human gut metagenome; human gut
1729
1654
-
Thr
TGT
[ENA]
¡û
>WENV182849186
OKKO01000351
[OKKO] human gut metagenome; human gut
1811
1736
-
Val
TAC
[ENA]
¡û
>WENV182849185
OKKO01000351
[OKKO] human gut metagenome; human gut
1890
1817
-
Glu
TTC
[ENA]
¡û
>WENV182849184
OKKO01000351
[OKKO] human gut metagenome; human gut
1965
1891
-
Asn
GTT
[ENA]
¡û
>WENV182849183
OKKO01000351
[OKKO] human gut metagenome; human gut
2048
1975
-
Gly
TCC
[ENA]
¡û
>WENV182849189
OKKO01000417
[OKKO] human gut metagenome; human gut
2239
2312
+
Glu
TTC
[ENA]
¡û
>WENV182849190
OKKO01000417
[OKKO] human gut metagenome; human gut
2345
2419
+
Asp
GTC
[ENA]
¡û
>WENV182849193
OKKO01000485
[OKKO] human gut metagenome; human gut
2349
2273
-
Val
GAC
[ENA]
¡û
>WENV182849192
OKKO01000485
[OKKO] human gut metagenome; human gut
2421
2350
-
Cys
GCA
[ENA]
¡û
>WENV182849191
OKKO01000485
[OKKO] human gut metagenome; human gut
2535
2462
-
Gly
GCC
[ENA]
¡û
>WENV182849181
OKKO01000313
[OKKO] human gut metagenome; human gut
3027
2952
-
Ile2
CAT
[ENA]
¡û
>WENV182849176
OKKO01000095
[OKKO] human gut metagenome; human gut
3531
3606
+
Arg
TCT
[ENA]
¡û
>WENV182849179
OKKO01000229
[OKKO] human gut metagenome; human gut
3791
3866
+
Phe
GAA
[ENA]
¡û
>WENV182849178
OKKO01000107
[OKKO] human gut metagenome; human gut
5245
5317
+
Gln
TTG
[ENA]
¡û
>WENV182849177
OKKO01000104
[OKKO] human gut metagenome; human gut
6129
6221
+
Ser
TGA
[ENA]
¡û
>WENV182849174
OKKO01000083
[OKKO] human gut metagenome; human gut
7421
7348
-
Glu
TTC
[ENA]
¡û
>WENV182849173
OKKO01000083
[OKKO] human gut metagenome; human gut
7524
7435
-
Ser
GCT
[ENA]
¡û
>WENV182849172
OKKO01000083
[OKKO] human gut metagenome; human gut
7607
7534
-
Ile
GAT
[ENA]
¡û
>WENV182849171
OKKO01000083
[OKKO] human gut metagenome; human gut
7691
7621
-
Gly
TCC
[ENA]
¡û
>WENV182849170
OKKO01000083
[OKKO] human gut metagenome; human gut
7779
7702
-
Phe
GAA
[ENA]
¡û
>WENV182849169
OKKO01000083
[OKKO] human gut metagenome; human gut
7858
7783
-
Asp
GTC
[ENA]
¡û
>WENV182849168
OKKO01000083
[OKKO] human gut metagenome; human gut
7980
7905
-
fMet
CAT
[ENA]
¡û
>WENV182849167
OKKO01000083
[OKKO] human gut metagenome; human gut
8102
8013
-
Ser
TGA
[ENA]
¡û
>WENV182849166
OKKO01000083
[OKKO] human gut metagenome; human gut
8187
8114
-
Glu
TTC
[ENA]
¡û
>WENV182849175
OKKO01000091
[OKKO] human gut metagenome; human gut
8246
8172
-
Arg
TCT
[ENA]
¡û
>WENV182849165
OKKO01000083
[OKKO] human gut metagenome; human gut
8274
8201
-
Ile
GAT
[ENA]
¡û
>WENV182849164
OKKO01000083
[OKKO] human gut metagenome; human gut
8358
8288
-
Gly
TCC
[ENA]
¡û
>WENV182849163
OKKO01000083
[OKKO] human gut metagenome; human gut
8436
8360
-
Asp
GTC
[ENA]
¡û
>WENV182849162
OKKO01000083
[OKKO] human gut metagenome; human gut
8549
8474
-
fMet
CAT
[ENA]
¡û
>WENV182849161
OKKO01000083
[OKKO] human gut metagenome; human gut
8671
8582
-
Ser
TGA
[ENA]
¡û
>WENV182849160
OKKO01000083
[OKKO] human gut metagenome; human gut
8779
8704
-
Ile2
CAT
[ENA]
¡û
>WENV182849159
OKKO01000083
[OKKO] human gut metagenome; human gut
8873
8798
-
Met
CAT
[ENA]
¡û
>WENV182849158
OKKO01000083
[OKKO] human gut metagenome; human gut
8969
8895
-
Ala
TGC
[ENA]
¡û
>WENV182849157
OKKO01000061
[OKKO] human gut metagenome; human gut
12296
12207
-
Ser
CGA
[ENA]
¡û
>WENV182849153
OKKO01000045
[OKKO] human gut metagenome; human gut
12808
12735
-
Gln
TTG
[ENA]
¡û
>WENV182849152
OKKO01000045
[OKKO] human gut metagenome; human gut
12894
12821
-
His
GTG
[ENA]
¡û
>WENV182849151
OKKO01000045
[OKKO] human gut metagenome; human gut
13004
12931
-
Trp
CCA
[ENA]
¡û
>WENV182849150
OKKO01000045
[OKKO] human gut metagenome; human gut
13090
13008
-
Tyr
GTA
[ENA]
¡û
>WENV182849137
OKKO01000004
[OKKO] human gut metagenome; human gut
17434
17362
-
Thr
CGT
[ENA]
¡û
>WENV182849154
OKKO01000050
[OKKO] human gut metagenome; human gut
18518
18593
+
Arg
CCT
[ENA]
¡û
>WENV182849138
OKKO01000006
[OKKO] human gut metagenome; human gut
26085
26013
-
Thr
GGT
[ENA]
¡û
>WENV182849141
OKKO01000029
[OKKO] human gut metagenome; human gut
35905
35830
-
Asn
GTT
[ENA]
¡û
>WENV182849140
OKKO01000023
[OKKO] human gut metagenome; human gut
38229
38315
+
Leu
GAG
[ENA]
¡û
>WENV182849139
OKKO01000007
[OKKO] human gut metagenome; human gut
70066
69993
-
Arg
CCG
[ENA]
¡û
>WENV182849135
OKKO01000002
[OKKO] human gut metagenome; human gut
86226
86297
+
Trp
CCA
[ENA]
¡û
>WENV182849136
OKKO01000002
[OKKO] human gut metagenome; human gut
107729
107802
+
Ile2
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK