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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKON] human gut metagenome; human gut
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182859478
OKON01003998
[OKON] human gut metagenome; human gut
77
153
+
Pro
GGG
[ENA]
¡û
>WENV182859452
OKON01001925
[OKON] human gut metagenome; human gut
89
163
+
Gln
CTG
[ENA]
¡û
>WENV182859481
OKON01004775
[OKON] human gut metagenome; human gut
93
167
+
Lys
TTT
[ENA]
¡û
>WENV182859434
OKON01000529
[OKON] human gut metagenome; human gut
204
128
-
Arg
CCG
[ENA]
¡û
>WENV182859425
OKON01000077
[OKON] human gut metagenome; human gut
206
131
-
His
GTG
[ENA]
¡û
>WENV182859443
OKON01001578
[OKON] human gut metagenome; human gut
215
140
-
Thr
TGT
[ENA]
¡û
>WENV182859442
OKON01001447
[OKON] human gut metagenome; human gut
217
142
-
Lys
CTT
[ENA]
¡û
>WENV182859477
OKON01003989
[OKON] human gut metagenome; human gut
226
301
+
Ile2
CAT
[ENA]
¡û
>WENV182859460
OKON01002284
[OKON] human gut metagenome; human gut
260
333
+
Gly
CCC
[ENA]
¡û
>WENV182859466
OKON01002450
[OKON] human gut metagenome; human gut
281
194
-
Ser
GGA
[ENA]
¡û
>WENV182859453
OKON01001952
[OKON] human gut metagenome; human gut
283
359
+
Pro
CGG
[ENA]
¡û
>WENV182859476
OKON01003975
[OKON] human gut metagenome; human gut
285
202
-
Leu
CAG
[ENA]
¡û
>WENV182859474
OKON01003585
[OKON] human gut metagenome; human gut
295
379
+
Leu
CAA
[ENA]
¡û
>WENV182859482
OKON01004945
[OKON] human gut metagenome; human gut
314
239
-
Thr
CGT
[ENA]
¡û
>WENV182859472
OKON01003440
[OKON] human gut metagenome; human gut
317
391
+
Asp
GTC
[ENA]
¡û
>WENV182859483
OKON01005177
[OKON] human gut metagenome; human gut
344
423
+
Gln
TTG
[ENA]
¡û
>WENV182859480
OKON01004574
[OKON] human gut metagenome; human gut
359
445
+
Leu
GAG
[ENA]
¡û
>WENV182859471
OKON01003407
[OKON] human gut metagenome; human gut
374
463
+
Ser
CGA
[ENA]
¡û
>WENV182859458
OKON01002189
[OKON] human gut metagenome; human gut
397
481
+
Tyr
GTA
[ENA]
¡û
>WENV182859473
OKON01003440
[OKON] human gut metagenome; human gut
452
527
+
Phe
GAA
[ENA]
¡û
>WENV182859465
OKON01002426
[OKON] human gut metagenome; human gut
472
399
-
Val
CAC
[ENA]
¡û
>WENV182859462
OKON01002376
[OKON] human gut metagenome; human gut
504
429
-
Pro
TGG
[ENA]
¡û
>WENV182859479
OKON01004425
[OKON] human gut metagenome; human gut
507
423
-
Leu
CAA
[ENA]
¡û
>WENV182859426
OKON01000132
[OKON] human gut metagenome; human gut
535
609
+
Asn
GTT
[ENA]
¡û
>WENV182859463
OKON01002384
[OKON] human gut metagenome; human gut
563
480
-
Leu
TAG
[ENA]
¡û
>WENV182859445
OKON01001826
[OKON] human gut metagenome; human gut
564
639
+
Thr
TGT
[ENA]
¡û
>WENV182859469
OKON01002825
[OKON] human gut metagenome; human gut
578
504
-
Val
TAC
[ENA]
¡û
>WENV182859475
OKON01003718
[OKON] human gut metagenome; human gut
621
716
+
SeC
TCA
[ENA]
¡û
>WENV182859444
OKON01001717
[OKON] human gut metagenome; human gut
633
708
+
Asn
GTT
[ENA]
¡û
>WENV182859439
OKON01001138
[OKON] human gut metagenome; human gut
636
560
-
Arg
ACG
[ENA]
¡û
>WENV182859440
OKON01001377
[OKON] human gut metagenome; human gut
639
714
+
Ala
GGC
[ENA]
¡û
>WENV182859446
OKON01001826
[OKON] human gut metagenome; human gut
645
720
+
Lys
TTT
[ENA]
¡û
>WENV182859436
OKON01000986
[OKON] human gut metagenome; human gut
684
611
-
Asn
GTT
[ENA]
¡û
>WENV182859461
OKON01002311
[OKON] human gut metagenome; human gut
704
617
-
Ser
CGA
[ENA]
¡û
>WENV182859459
OKON01002271
[OKON] human gut metagenome; human gut
711
638
-
Gly
CCC
[ENA]
¡û
>WENV182859447
OKON01001826
[OKON] human gut metagenome; human gut
729
811
+
Leu
TAG
[ENA]
¡û
>WENV182859438
OKON01001138
[OKON] human gut metagenome; human gut
733
641
-
Ser
GCT
[ENA]
¡û
>WENV182859467
OKON01002479
[OKON] human gut metagenome; human gut
739
665
-
Leu
TAA
[ENA]
¡û
>WENV182859456
OKON01002081
[OKON] human gut metagenome; human gut
793
720
-
Trp
CCA
[ENA]
¡û
>WENV182859470
OKON01002896
[OKON] human gut metagenome; human gut
795
719
-
fMet
CAT
[ENA]
¡û
>WENV182859448
OKON01001826
[OKON] human gut metagenome; human gut
815
889
+
Gly
GCC
[ENA]
¡û
>WENV182859468
OKON01002600
[OKON] human gut metagenome; human gut
835
762
-
Arg
CCT
[ENA]
¡û
>WENV182859464
OKON01002426
[OKON] human gut metagenome; human gut
851
924
+
Gly
GCC
[ENA]
¡û
>WENV182859455
OKON01002052
[OKON] human gut metagenome; human gut
859
783
-
Pro
CGG
[ENA]
¡û
>WENV182859449
OKON01001826
[OKON] human gut metagenome; human gut
900
988
+
Leu
TAA
[ENA]
¡û
>WENV182859457
OKON01002158
[OKON] human gut metagenome; human gut
975
1050
+
Thr
CGT
[ENA]
¡û
>WENV182859450
OKON01001826
[OKON] human gut metagenome; human gut
994
1067
+
Arg
ACG
[ENA]
¡û
>WENV182859454
OKON01002001
[OKON] human gut metagenome; human gut
1001
1076
+
Phe
GAA
[ENA]
¡û
>WENV182859441
OKON01001402
[OKON] human gut metagenome; human gut
1021
1097
+
Val
GAC
[ENA]
¡û
>WENV182859429
OKON01000143
[OKON] human gut metagenome; human gut
1058
973
-
Ser
GGA
[ENA]
¡û
>WENV182859451
OKON01001826
[OKON] human gut metagenome; human gut
1077
1150
+
Pro
TGG
[ENA]
¡û
>WENV182859437
OKON01001026
[OKON] human gut metagenome; human gut
1498
1573
+
Val
TAC
[ENA]
¡û
>WENV182859435
OKON01000772
[OKON] human gut metagenome; human gut
1555
1481
-
Pro
GGG
[ENA]
¡û
>WENV182859433
OKON01000513
[OKON] human gut metagenome; human gut
1713
1786
+
Ala
GGC
[ENA]
¡û
>WENV182859432
OKON01000477
[OKON] human gut metagenome; human gut
1919
1993
+
Arg
CCT
[ENA]
¡û
>WENV182859424
OKON01000077
[OKON] human gut metagenome; human gut
2273
2348
+
Arg
TCT
[ENA]
¡û
>WENV182859431
OKON01000320
[OKON] human gut metagenome; human gut
2324
2398
+
Ile
GAT
[ENA]
¡û
>WENV182859427
OKON01000136
[OKON] human gut metagenome; human gut
2344
2420
+
Asp
GTC
[ENA]
¡û
>WENV182859428
OKON01000136
[OKON] human gut metagenome; human gut
2429
2504
+
Trp
CCA
[ENA]
¡û
>WENV182859430
OKON01000156
[OKON] human gut metagenome; human gut
2941
3015
+
Glu
TTC
[ENA]
¡û
>WENV182859423
OKON01000049
[OKON] human gut metagenome; human gut
3744
3670
-
Met
CAT
[ENA]
¡û
>WENV182859422
OKON01000049
[OKON] human gut metagenome; human gut
3882
3809
-
Thr
GGT
[ENA]
¡û
>WENV182859421
OKON01000049
[OKON] human gut metagenome; human gut
4165
4083
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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