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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OKTY] human gut metagenome; feces
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182919691
OKTY01002345
[OKTY] human gut metagenome; feces
15
89
+
Thr
CGT
[ENA]
¡û
>WENV182919681
OKTY01001725
[OKTY] human gut metagenome; feces
74
149
+
Pro
TGG
[ENA]
¡û
>WENV182919680
OKTY01001413
[OKTY] human gut metagenome; feces
75
1
-
Trp
CCA
[ENA]
¡û
>WENV182919665
OKTY01000305
[OKTY] human gut metagenome; feces
87
160
+
Cys
GCA
[ENA]
¡û
>WENV182919664
OKTY01000207
[OKTY] human gut metagenome; feces
104
30
-
Pro
CGG
[ENA]
¡û
>WENV182919697
OKTY01003467
[OKTY] human gut metagenome; feces
124
198
+
Cys
GCA
[ENA]
¡û
>WENV182919674
OKTY01000692
[OKTY] human gut metagenome; feces
129
204
+
Ala
TGC
[ENA]
¡û
>WENV182919666
OKTY01000305
[OKTY] human gut metagenome; feces
166
241
+
Gly
GCC
[ENA]
¡û
>WENV182919682
OKTY01001725
[OKTY] human gut metagenome; feces
168
239
+
Gly
TCC
[ENA]
¡û
>WENV182919698
OKTY01003467
[OKTY] human gut metagenome; feces
206
294
+
Leu
TAA
[ENA]
¡û
>WENV182919683
OKTY01001725
[OKTY] human gut metagenome; feces
266
339
+
Arg
TCT
[ENA]
¡û
>WENV182919667
OKTY01000305
[OKTY] human gut metagenome; feces
276
351
+
Asn
GTT
[ENA]
¡û
>WENV182919699
OKTY01003467
[OKTY] human gut metagenome; feces
305
381
+
Pro
TGG
[ENA]
¡û
>WENV182919696
OKTY01003266
[OKTY] human gut metagenome; feces
318
244
-
Gln
CTG
[ENA]
¡û
>WENV182919692
OKTY01002456
[OKTY] human gut metagenome; feces
338
265
-
Ala
TGC
[ENA]
¡û
>WENV182919693
OKTY01003056
[OKTY] human gut metagenome; feces
372
299
-
Arg
CCT
[ENA]
¡û
>WENV182919684
OKTY01001725
[OKTY] human gut metagenome; feces
387
461
+
His
GTG
[ENA]
¡û
>WENV182919700
OKTY01003467
[OKTY] human gut metagenome; feces
390
465
+
Ala
TGC
[ENA]
¡û
>WENV182919694
OKTY01003074
[OKTY] human gut metagenome; feces
398
324
-
Ile
GAT
[ENA]
¡û
>WENV182919675
OKTY01000692
[OKTY] human gut metagenome; feces
398
475
+
Ile
GAT
[ENA]
¡û
>WENV182919695
OKTY01003266
[OKTY] human gut metagenome; feces
429
356
-
Glu
CTC
[ENA]
¡û
>WENV182919689
OKTY01002043
[OKTY] human gut metagenome; feces
452
525
+
Asn
GTT
[ENA]
¡û
>WENV182919687
OKTY01002033
[OKTY] human gut metagenome; feces
459
534
+
Phe
GAA
[ENA]
¡û
>WENV182919668
OKTY01000305
[OKTY] human gut metagenome; feces
470
542
+
Thr
TGT
[ENA]
¡û
>WENV182919685
OKTY01001725
[OKTY] human gut metagenome; feces
485
558
+
Gln
TTG
[ENA]
¡û
>WENV182919676
OKTY01000994
[OKTY] human gut metagenome; feces
494
568
+
Glu
CTC
[ENA]
¡û
>WENV182919678
OKTY01001014
[OKTY] human gut metagenome; feces
511
585
+
Met
CAT
[ENA]
¡û
>WENV182919690
OKTY01002043
[OKTY] human gut metagenome; feces
528
602
+
Cys
GCA
[ENA]
¡û
>WENV182919688
OKTY01002033
[OKTY] human gut metagenome; feces
542
617
+
Gly
GCC
[ENA]
¡û
>WENV182919672
OKTY01000490
[OKTY] human gut metagenome; feces
546
460
-
Leu
AAG
[ENA]
¡û
>WENV182919669
OKTY01000305
[OKTY] human gut metagenome; feces
551
626
+
Ile2
CAT
[ENA]
¡û
>WENV182919677
OKTY01000994
[OKTY] human gut metagenome; feces
572
647
+
Lys
CTT
[ENA]
¡û
>WENV182919686
OKTY01001725
[OKTY] human gut metagenome; feces
574
648
+
Lys
TTT
[ENA]
¡û
>WENV182919670
OKTY01000305
[OKTY] human gut metagenome; feces
686
761
+
Asp
GTC
[ENA]
¡û
>WENV182919671
OKTY01000305
[OKTY] human gut metagenome; feces
791
866
+
Val
TAC
[ENA]
¡û
>WENV182919679
OKTY01001266
[OKTY] human gut metagenome; feces
800
724
-
Arg
CCG
[ENA]
¡û
>WENV182919663
OKTY01000050
[OKTY] human gut metagenome; feces
858
931
+
Gly
GCC
[ENA]
¡û
>WENV182919673
OKTY01000534
[OKTY] human gut metagenome; feces
894
966
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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