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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKZZ] human gut metagenome; human gut
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182986880
OKZZ01001822
[OKZZ] human gut metagenome; human gut
46
130
+
Tyr
GTA
[ENA]
¡û
>WENV182986876
OKZZ01001777
[OKZZ] human gut metagenome; human gut
52
127
+
Arg
TCT
[ENA]
¡û
>WENV182986885
OKZZ01003353
[OKZZ] human gut metagenome; human gut
75
150
+
Pro
CGG
[ENA]
¡û
>WENV182986869
OKZZ01001078
[OKZZ] human gut metagenome; human gut
103
178
+
Thr
GGT
[ENA]
¡û
>WENV182986877
OKZZ01001777
[OKZZ] human gut metagenome; human gut
132
206
+
His
GTG
[ENA]
¡û
>WENV182986886
OKZZ01003353
[OKZZ] human gut metagenome; human gut
160
231
+
Glu
CTC
[ENA]
¡û
>WENV182986892
OKZZ01004683
[OKZZ] human gut metagenome; human gut
175
102
-
Gly
CCC
[ENA]
¡û
>WENV182986826
OKZZ01000069
[OKZZ] human gut metagenome; human gut
196
122
-
Glu
TTC
[ENA]
¡û
>WENV182986867
OKZZ01000956
[OKZZ] human gut metagenome; human gut
200
130
-
Cys
GCA
[ENA]
¡û
>WENV182986847
OKZZ01000161
[OKZZ] human gut metagenome; human gut
232
157
-
His
GTG
[ENA]
¡û
>WENV182986887
OKZZ01003372
[OKZZ] human gut metagenome; human gut
236
311
+
Ala
TGC
[ENA]
¡û
>WENV182986875
OKZZ01001399
[OKZZ] human gut metagenome; human gut
250
324
+
Pro
TGG
[ENA]
¡û
>WENV182986878
OKZZ01001777
[OKZZ] human gut metagenome; human gut
259
330
+
Gln
TTG
[ENA]
¡û
>WENV182986850
OKZZ01000226
[OKZZ] human gut metagenome; human gut
283
209
-
Asn
GTT
[ENA]
¡û
>WENV182986891
OKZZ01004468
[OKZZ] human gut metagenome; human gut
300
227
-
Pro
CGG
[ENA]
¡û
>WENV182986863
OKZZ01000768
[OKZZ] human gut metagenome; human gut
326
255
-
Gln
CTG
[ENA]
¡û
>WENV182986893
OKZZ01004845
[OKZZ] human gut metagenome; human gut
335
425
+
Ser
GGA
[ENA]
¡û
>WENV182986883
OKZZ01002194
[OKZZ] human gut metagenome; human gut
359
271
-
Leu
TAA
[ENA]
¡û
>WENV182986879
OKZZ01001777
[OKZZ] human gut metagenome; human gut
365
437
+
Lys
TTT
[ENA]
¡û
>WENV182986849
OKZZ01000226
[OKZZ] human gut metagenome; human gut
382
308
-
Asn
GTT
[ENA]
¡û
>WENV182986890
OKZZ01004468
[OKZZ] human gut metagenome; human gut
382
310
-
Gln
CTG
[ENA]
¡û
>WENV182986888
OKZZ01003517
[OKZZ] human gut metagenome; human gut
427
503
+
Met
CAT
[ENA]
¡û
>WENV182986889
OKZZ01004268
[OKZZ] human gut metagenome; human gut
434
362
-
Glu
CTC
[ENA]
¡û
>WENV182986882
OKZZ01002194
[OKZZ] human gut metagenome; human gut
461
386
-
Asp
GTC
[ENA]
¡û
>WENV182986881
OKZZ01002129
[OKZZ] human gut metagenome; human gut
484
570
+
Ser
TGA
[ENA]
¡û
>WENV182986872
OKZZ01001176
[OKZZ] human gut metagenome; human gut
530
604
+
Ile
GAT
[ENA]
¡û
>WENV182986874
OKZZ01001211
[OKZZ] human gut metagenome; human gut
536
463
-
Glu
CTC
[ENA]
¡û
>WENV182986884
OKZZ01002869
[OKZZ] human gut metagenome; human gut
553
469
-
Tyr
GTA
[ENA]
¡û
>WENV182986871
OKZZ01001126
[OKZZ] human gut metagenome; human gut
553
478
-
Ala
TGC
[ENA]
¡û
>WENV182986868
OKZZ01001061
[OKZZ] human gut metagenome; human gut
558
483
-
Gly
GCC
[ENA]
¡û
>WENV182986873
OKZZ01001176
[OKZZ] human gut metagenome; human gut
621
695
+
Ala
TGC
[ENA]
¡û
>WENV182986870
OKZZ01001126
[OKZZ] human gut metagenome; human gut
640
564
-
Ile
GAT
[ENA]
¡û
>WENV182986833
OKZZ01000127
[OKZZ] human gut metagenome; human gut
689
774
+
Ser
GCT
[ENA]
¡û
>WENV182986834
OKZZ01000127
[OKZZ] human gut metagenome; human gut
780
855
+
Arg
ACG
[ENA]
¡û
>WENV182986866
OKZZ01000877
[OKZZ] human gut metagenome; human gut
793
718
-
Lys
TTT
[ENA]
¡û
>WENV182986846
OKZZ01000143
[OKZZ] human gut metagenome; human gut
800
727
-
Phe
GAA
[ENA]
¡û
>WENV182986835
OKZZ01000127
[OKZZ] human gut metagenome; human gut
862
948
+
Ser
TGA
[ENA]
¡û
>WENV182986865
OKZZ01000877
[OKZZ] human gut metagenome; human gut
874
800
-
Gln
TTG
[ENA]
¡û
>WENV182986836
OKZZ01000127
[OKZZ] human gut metagenome; human gut
954
1025
+
Gln
CTG
[ENA]
¡û
>WENV182986864
OKZZ01000877
[OKZZ] human gut metagenome; human gut
974
899
-
His
GTG
[ENA]
¡û
>WENV182986837
OKZZ01000127
[OKZZ] human gut metagenome; human gut
1034
1107
+
Phe
GAA
[ENA]
¡û
>WENV182986856
OKZZ01000381
[OKZZ] human gut metagenome; human gut
1128
1204
+
Ile
GAT
[ENA]
¡û
>WENV182986862
OKZZ01000633
[OKZZ] human gut metagenome; human gut
1148
1223
+
Pro
TGG
[ENA]
¡û
>WENV182986861
OKZZ01000580
[OKZZ] human gut metagenome; human gut
1168
1095
-
Thr
CGT
[ENA]
¡û
>WENV182986838
OKZZ01000127
[OKZZ] human gut metagenome; human gut
1225
1296
+
Gln
TTG
[ENA]
¡û
>WENV182986839
OKZZ01000127
[OKZZ] human gut metagenome; human gut
1309
1380
+
Arg
TCG
[ENA]
¡û
>WENV182986840
OKZZ01000127
[OKZZ] human gut metagenome; human gut
1386
1459
+
His
GTG
[ENA]
¡û
>WENV182986841
OKZZ01000127
[OKZZ] human gut metagenome; human gut
1464
1538
+
Thr
TGT
[ENA]
¡û
>WENV182986859
OKZZ01000527
[OKZZ] human gut metagenome; human gut
1475
1549
+
Met
CAT
[ENA]
¡û
>WENV182986860
OKZZ01000527
[OKZZ] human gut metagenome; human gut
1610
1684
+
Met
CAT
[ENA]
¡û
>WENV182986858
OKZZ01000474
[OKZZ] human gut metagenome; human gut
1807
1889
+
Leu
TAG
[ENA]
¡û
>WENV182986815
OKZZ01000036
[OKZZ] human gut metagenome; human gut
2237
2320
+
Tyr
GTA
[ENA]
¡û
>WENV182986829
OKZZ01000096
[OKZZ] human gut metagenome; human gut
2326
2253
-
Trp
CCA
[ENA]
¡û
>WENV182986816
OKZZ01000036
[OKZZ] human gut metagenome; human gut
2412
2484
+
Thr
GGT
[ENA]
¡û
>WENV182986827
OKZZ01000093
[OKZZ] human gut metagenome; human gut
2889
2818
-
Gln
TTG
[ENA]
¡û
>WENV182986857
OKZZ01000393
[OKZZ] human gut metagenome; human gut
3112
3185
+
fMet
CAT
[ENA]
¡û
>WENV182986817
OKZZ01000036
[OKZZ] human gut metagenome; human gut
3777
3850
+
Trp
CCA
[ENA]
¡û
>WENV182986854
OKZZ01000265
[OKZZ] human gut metagenome; human gut
3882
3806
-
Ile
GAT
[ENA]
¡û
>WENV182986822
OKZZ01000059
[OKZZ] human gut metagenome; human gut
3883
3957
+
Ile2
CAT
[ENA]
¡û
>WENV182986855
OKZZ01000274
[OKZZ] human gut metagenome; human gut
3905
3993
+
Ser
GGA
[ENA]
¡û
>WENV182986853
OKZZ01000265
[OKZZ] human gut metagenome; human gut
3961
3886
-
Ala
TGC
[ENA]
¡û
>WENV182986851
OKZZ01000231
[OKZZ] human gut metagenome; human gut
6619
6694
+
Pro
GGG
[ENA]
¡û
>WENV182986852
OKZZ01000249
[OKZZ] human gut metagenome; human gut
6744
6819
+
Lys
TTT
[ENA]
¡û
>WENV182986819
OKZZ01000054
[OKZZ] human gut metagenome; human gut
6757
6685
-
Arg
CCG
[ENA]
¡û
>WENV182986842
OKZZ01000132
[OKZZ] human gut metagenome; human gut
6940
7014
+
Thr
TGT
[ENA]
¡û
>WENV182986843
OKZZ01000140
[OKZZ] human gut metagenome; human gut
7998
8071
+
Lys
CTT
[ENA]
¡û
>WENV182986844
OKZZ01000140
[OKZZ] human gut metagenome; human gut
8095
8168
+
Lys
CTT
[ENA]
¡û
>WENV182986845
OKZZ01000140
[OKZZ] human gut metagenome; human gut
8188
8261
+
Lys
CTT
[ENA]
¡û
>WENV182986809
OKZZ01000005
[OKZZ] human gut metagenome; human gut
8853
8780
-
Pro
CGG
[ENA]
¡û
>WENV182986808
OKZZ01000005
[OKZZ] human gut metagenome; human gut
9034
9109
+
Phe
GAA
[ENA]
¡û
>WENV182986848
OKZZ01000162
[OKZZ] human gut metagenome; human gut
10558
10632
+
Cys
GCA
[ENA]
¡û
>WENV182986832
OKZZ01000117
[OKZZ] human gut metagenome; human gut
11107
11182
+
Gly
CCC
[ENA]
¡û
>WENV182986824
OKZZ01000066
[OKZZ] human gut metagenome; human gut
12949
13023
+
Thr
TGT
[ENA]
¡û
>WENV182986831
OKZZ01000113
[OKZZ] human gut metagenome; human gut
13326
13252
-
Glu
CTC
[ENA]
¡û
>WENV182986801
OKZZ01000003
[OKZZ] human gut metagenome; human gut
13566
13640
+
Asp
GTC
[ENA]
¡û
>WENV182986830
OKZZ01000113
[OKZZ] human gut metagenome; human gut
13768
13681
-
Ser
GCT
[ENA]
¡û
>WENV182986823
OKZZ01000063
[OKZZ] human gut metagenome; human gut
14893
14967
+
Ala
GGC
[ENA]
¡û
>WENV182986828
OKZZ01000096
[OKZZ] human gut metagenome; human gut
15947
16032
+
Ser
TGA
[ENA]
¡û
>WENV182986821
OKZZ01000058
[OKZZ] human gut metagenome; human gut
17699
17773
+
Arg
TCT
[ENA]
¡û
>WENV182986825
OKZZ01000069
[OKZZ] human gut metagenome; human gut
20330
20415
+
Ser
TGA
[ENA]
¡û
>WENV182986812
OKZZ01000022
[OKZZ] human gut metagenome; human gut
20908
20981
+
Gly
GCC
[ENA]
¡û
>WENV182986813
OKZZ01000022
[OKZZ] human gut metagenome; human gut
21028
21111
+
Leu
CAG
[ENA]
¡û
>WENV182986814
OKZZ01000022
[OKZZ] human gut metagenome; human gut
21124
21197
+
Gly
GCC
[ENA]
¡û
>WENV182986820
OKZZ01000057
[OKZZ] human gut metagenome; human gut
21186
21098
-
Ser
GGA
[ENA]
¡û
>WENV182986818
OKZZ01000045
[OKZZ] human gut metagenome; human gut
23074
22990
-
Leu
CAA
[ENA]
¡û
>WENV182986811
OKZZ01000020
[OKZZ] human gut metagenome; human gut
30735
30659
-
Val
TAC
[ENA]
¡û
>WENV182986810
OKZZ01000020
[OKZZ] human gut metagenome; human gut
30850
30774
-
Val
TAC
[ENA]
¡û
>WENV182986800
OKZZ01000002
[OKZZ] human gut metagenome; human gut
31696
31768
+
Arg
CCT
[ENA]
¡û
>WENV182986802
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32081
32154
+
fMet
CAT
[ENA]
¡û
>WENV182986803
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32372
32445
+
Asn
GTT
[ENA]
¡û
>WENV182986804
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32452
32525
+
Trp
CCA
[ENA]
¡û
>WENV182986805
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32530
32601
+
Gln
TTG
[ENA]
¡û
>WENV182986806
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32606
32678
+
Glu
TTC
[ENA]
¡û
>WENV182986807
OKZZ01000003
[OKZZ] human gut metagenome; human gut
32842
32924
+
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK