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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OLZM] human gut metagenome; feces
HIT:
168 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183397821
OLZM01011322
[OLZM] human gut metagenome; feces
19
91
+
Gln
CTG
[ENA]
¡û
>WENV183397840
OLZM01016272
[OLZM] human gut metagenome; feces
77
153
+
Pro
GGG
[ENA]
¡û
>WENV183397738
OLZM01001589
[OLZM] human gut metagenome; feces
80
6
-
Ile
GAT
[ENA]
¡û
>WENV183397725
OLZM01000891
[OLZM] human gut metagenome; feces
84
158
+
Cys
GCA
[ENA]
¡û
>WENV183397791
OLZM01005529
[OLZM] human gut metagenome; feces
93
11
-
Leu
CAG
[ENA]
¡û
>WENV183397831
OLZM01013313
[OLZM] human gut metagenome; feces
96
21
-
Lys
CTT
[ENA]
¡û
>WENV183397792
OLZM01005696
[OLZM] human gut metagenome; feces
96
171
+
Pro
CGG
[ENA]
¡û
>WENV183397745
OLZM01001993
[OLZM] human gut metagenome; feces
98
184
+
Ser
TGA
[ENA]
¡û
>WENV183397758
OLZM01002404
[OLZM] human gut metagenome; feces
100
175
+
Val
TAC
[ENA]
¡û
>WENV183397775
OLZM01003516
[OLZM] human gut metagenome; feces
101
30
-
Gln
TTG
[ENA]
¡û
>WENV183397839
OLZM01016052
[OLZM] human gut metagenome; feces
107
180
+
Thr
CGT
[ENA]
¡û
>WENV183397820
OLZM01011305
[OLZM] human gut metagenome; feces
114
188
+
Cys
GCA
[ENA]
¡û
>WENV183397719
OLZM01000666
[OLZM] human gut metagenome; feces
118
42
-
Arg
CCG
[ENA]
¡û
>WENV183397701
OLZM01000352
[OLZM] human gut metagenome; feces
133
61
-
Thr
TGT
[ENA]
¡û
>WENV183397709
OLZM01000367
[OLZM] human gut metagenome; feces
141
66
-
Ile
GAT
[ENA]
¡û
>WENV183397830
OLZM01013236
[OLZM] human gut metagenome; feces
159
248
+
Leu
GAG
[ENA]
¡û
>WENV183397720
OLZM01000676
[OLZM] human gut metagenome; feces
165
240
+
Ala
TGC
[ENA]
¡û
>WENV183397756
OLZM01002370
[OLZM] human gut metagenome; feces
168
92
-
Arg
ACG
[ENA]
¡û
>WENV183397797
OLZM01006391
[OLZM] human gut metagenome; feces
170
96
-
Glu
CTC
[ENA]
¡û
>WENV183397793
OLZM01005812
[OLZM] human gut metagenome; feces
174
245
+
Gln
TTG
[ENA]
¡û
>WENV183397810
OLZM01009225
[OLZM] human gut metagenome; feces
190
114
-
His
GTG
[ENA]
¡û
>WENV183397727
OLZM01000967
[OLZM] human gut metagenome; feces
198
122
-
Val
CAC
[ENA]
¡û
>WENV183397842
OLZM01017332
[OLZM] human gut metagenome; feces
203
130
-
Lys
CTT
[ENA]
¡û
>WENV183397815
OLZM01010357
[OLZM] human gut metagenome; feces
212
138
-
Ala
GGC
[ENA]
¡û
>WENV183397798
OLZM01006867
[OLZM] human gut metagenome; feces
214
289
+
His
GTG
[ENA]
¡û
>WENV183397746
OLZM01001993
[OLZM] human gut metagenome; feces
216
305
+
Ser
GCT
[ENA]
¡û
>WENV183397814
OLZM01010171
[OLZM] human gut metagenome; feces
217
291
+
Ile2
CAT
[ENA]
¡û
>WENV183397829
OLZM01013110
[OLZM] human gut metagenome; feces
220
145
-
His
GTG
[ENA]
¡û
>WENV183397751
OLZM01002289
[OLZM] human gut metagenome; feces
221
296
+
Thr
TGT
[ENA]
¡û
>WENV183397741
OLZM01001874
[OLZM] human gut metagenome; feces
227
299
+
Thr
CGT
[ENA]
¡û
>WENV183397700
OLZM01000352
[OLZM] human gut metagenome; feces
230
147
-
Leu
TAG
[ENA]
¡û
>WENV183397834
OLZM01014530
[OLZM] human gut metagenome; feces
242
166
-
Asp
GTC
[ENA]
¡û
>WENV183397774
OLZM01003516
[OLZM] human gut metagenome; feces
243
169
-
His
GTG
[ENA]
¡û
>WENV183397837
OLZM01015545
[OLZM] human gut metagenome; feces
243
316
+
fMet
CAT
[ENA]
¡û
>WENV183397708
OLZM01000367
[OLZM] human gut metagenome; feces
245
173
-
Gly
TCC
[ENA]
¡û
>WENV183397826
OLZM01011861
[OLZM] human gut metagenome; feces
260
342
+
Leu
TAG
[ENA]
¡û
>WENV183397807
OLZM01008762
[OLZM] human gut metagenome; feces
268
195
-
Gly
TCC
[ENA]
¡û
>WENV183397809
OLZM01009225
[OLZM] human gut metagenome; feces
273
197
-
Arg
TCT
[ENA]
¡û
>WENV183397759
OLZM01002471
[OLZM] human gut metagenome; feces
285
213
-
Trp
CCA
[ENA]
¡û
>WENV183397841
OLZM01016456
[OLZM] human gut metagenome; feces
300
225
-
His
GTG
[ENA]
¡û
>WENV183397796
OLZM01006391
[OLZM] human gut metagenome; feces
304
229
-
Lys
CTT
[ENA]
¡û
>WENV183397699
OLZM01000352
[OLZM] human gut metagenome; feces
307
235
-
Lys
TTT
[ENA]
¡û
>WENV183397707
OLZM01000367
[OLZM] human gut metagenome; feces
327
253
-
Phe
GAA
[ENA]
¡û
>WENV183397828
OLZM01012632
[OLZM] human gut metagenome; feces
330
403
+
Pro
CGG
[ENA]
¡û
>WENV183397816
OLZM01010466
[OLZM] human gut metagenome; feces
342
413
+
Gln
TTG
[ENA]
¡û
>WENV183397833
OLZM01014231
[OLZM] human gut metagenome; feces
352
426
+
Thr
TGT
[ENA]
¡û
>WENV183397817
OLZM01010497
[OLZM] human gut metagenome; feces
359
430
+
Gln
TTG
[ENA]
¡û
>WENV183397825
OLZM01011759
[OLZM] human gut metagenome; feces
361
285
-
Ile
GAT
[ENA]
¡û
>WENV183397788
OLZM01004870
[OLZM] human gut metagenome; feces
363
436
+
Gly
GCC
[ENA]
¡û
>WENV183397773
OLZM01003516
[OLZM] human gut metagenome; feces
365
290
-
Arg
TCT
[ENA]
¡û
>WENV183397808
OLZM01008827
[OLZM] human gut metagenome; feces
372
444
+
Arg
CCT
[ENA]
¡û
>WENV183397835
OLZM01014987
[OLZM] human gut metagenome; feces
374
460
+
Leu
CAG
[ENA]
¡û
>WENV183397790
OLZM01005170
[OLZM] human gut metagenome; feces
392
302
-
Ser
GGA
[ENA]
¡û
>WENV183397776
OLZM01003684
[OLZM] human gut metagenome; feces
394
321
-
Gly
TCC
[ENA]
¡û
>WENV183397698
OLZM01000352
[OLZM] human gut metagenome; feces
398
326
-
Asp
GTC
[ENA]
¡û
>WENV183397706
OLZM01000367
[OLZM] human gut metagenome; feces
403
330
-
fMet
CAT
[ENA]
¡û
>WENV183397752
OLZM01002289
[OLZM] human gut metagenome; feces
417
491
+
fMet
CAT
[ENA]
¡û
>WENV183397749
OLZM01002229
[OLZM] human gut metagenome; feces
427
502
+
Pro
GGG
[ENA]
¡û
>WENV183397819
OLZM01011078
[OLZM] human gut metagenome; feces
432
357
-
Val
TAC
[ENA]
¡û
>WENV183397721
OLZM01000676
[OLZM] human gut metagenome; feces
435
511
+
Ile
GAT
[ENA]
¡û
>WENV183397748
OLZM01002218
[OLZM] human gut metagenome; feces
436
361
-
Arg
CCT
[ENA]
¡û
>WENV183397824
OLZM01011759
[OLZM] human gut metagenome; feces
440
365
-
Ala
TGC
[ENA]
¡û
>WENV183397832
OLZM01013934
[OLZM] human gut metagenome; feces
453
527
+
Lys
CTT
[ENA]
¡û
>WENV183397838
OLZM01015638
[OLZM] human gut metagenome; feces
462
378
-
Leu
CAG
[ENA]
¡û
>WENV183397772
OLZM01003516
[OLZM] human gut metagenome; feces
466
396
-
Gly
TCC
[ENA]
¡û
>WENV183397697
OLZM01000352
[OLZM] human gut metagenome; feces
473
401
-
Val
TAC
[ENA]
¡û
>WENV183397822
OLZM01011436
[OLZM] human gut metagenome; feces
475
550
+
Lys
TTT
[ENA]
¡û
>WENV183397804
OLZM01007960
[OLZM] human gut metagenome; feces
492
404
-
Ser
GGA
[ENA]
¡û
>WENV183397823
OLZM01011671
[OLZM] human gut metagenome; feces
499
573
+
Asn
GTT
[ENA]
¡û
>WENV183397705
OLZM01000367
[OLZM] human gut metagenome; feces
502
413
-
Ser
TGA
[ENA]
¡û
>WENV183397753
OLZM01002289
[OLZM] human gut metagenome; feces
509
583
+
Phe
GAA
[ENA]
¡û
>WENV183397737
OLZM01001412
[OLZM] human gut metagenome; feces
512
437
-
Arg
TCT
[ENA]
¡û
>WENV183397785
OLZM01004464
[OLZM] human gut metagenome; feces
515
587
+
Glu
TTC
[ENA]
¡û
>WENV183397806
OLZM01008582
[OLZM] human gut metagenome; feces
521
595
+
Ile2
CAT
[ENA]
¡û
>WENV183397800
OLZM01007191
[OLZM] human gut metagenome; feces
523
607
+
Leu
CAA
[ENA]
¡û
>WENV183397818
OLZM01011078
[OLZM] human gut metagenome; feces
529
455
-
Asn
GTT
[ENA]
¡û
>WENV183397836
OLZM01015060
[OLZM] human gut metagenome; feces
530
448
-
Leu
TAG
[ENA]
¡û
>WENV183397827
OLZM01012107
[OLZM] human gut metagenome; feces
536
463
-
Val
GAC
[ENA]
¡û
>WENV183397744
OLZM01001968
[OLZM] human gut metagenome; feces
541
448
-
Ser
GCT
[ENA]
¡û
>WENV183397812
OLZM01009260
[OLZM] human gut metagenome; feces
541
615
+
Met
CAT
[ENA]
¡û
>WENV183397811
OLZM01009244
[OLZM] human gut metagenome; feces
562
634
+
Pro
TGG
[ENA]
¡û
>WENV183397761
OLZM01002500
[OLZM] human gut metagenome; feces
566
493
-
Pro
CGG
[ENA]
¡û
>WENV183397805
OLZM01008439
[OLZM] human gut metagenome; feces
569
642
+
Thr
CGT
[ENA]
¡û
>WENV183397704
OLZM01000367
[OLZM] human gut metagenome; feces
583
510
-
Glu
TTC
[ENA]
¡û
>WENV183397762
OLZM01002555
[OLZM] human gut metagenome; feces
583
656
+
Asn
GTT
[ENA]
¡û
>WENV183397777
OLZM01003721
[OLZM] human gut metagenome; feces
586
669
+
Tyr
GTA
[ENA]
¡û
>WENV183397769
OLZM01003094
[OLZM] human gut metagenome; feces
588
500
-
Ser
CGA
[ENA]
¡û
>WENV183397765
OLZM01002964
[OLZM] human gut metagenome; feces
592
518
-
Gly
TCC
[ENA]
¡û
>WENV183397754
OLZM01002289
[OLZM] human gut metagenome; feces
596
670
+
Lys
TTT
[ENA]
¡û
>WENV183397801
OLZM01007318
[OLZM] human gut metagenome; feces
602
676
+
Pro
TGG
[ENA]
¡û
>WENV183397740
OLZM01001796
[OLZM] human gut metagenome; feces
622
548
-
Glu
CTC
[ENA]
¡û
>WENV183397768
OLZM01003022
[OLZM] human gut metagenome; feces
636
563
-
Val
CAC
[ENA]
¡û
>WENV183397781
OLZM01004088
[OLZM] human gut metagenome; feces
639
721
+
Leu
CAG
[ENA]
¡û
>WENV183397794
OLZM01005921
[OLZM] human gut metagenome; feces
650
567
-
Leu
CAG
[ENA]
¡û
>WENV183397813
OLZM01009922
[OLZM] human gut metagenome; feces
653
572
-
Leu
TAG
[ENA]
¡û
>WENV183397743
OLZM01001968
[OLZM] human gut metagenome; feces
663
576
-
Ser
TGA
[ENA]
¡û
>WENV183397703
OLZM01000367
[OLZM] human gut metagenome; feces
684
611
-
Gln
TTG
[ENA]
¡û
>WENV183397803
OLZM01007632
[OLZM] human gut metagenome; feces
694
620
-
Thr
CGT
[ENA]
¡û
>WENV183397726
OLZM01000949
[OLZM] human gut metagenome; feces
714
630
-
Leu
TAG
[ENA]
¡û
>WENV183397779
OLZM01003751
[OLZM] human gut metagenome; feces
729
657
-
Thr
AGT
[ENA]
¡û
>WENV183397760
OLZM01002500
[OLZM] human gut metagenome; feces
733
806
+
Phe
GAA
[ENA]
¡û
>WENV183397802
OLZM01007622
[OLZM] human gut metagenome; feces
735
663
-
Glu
CTC
[ENA]
¡û
>WENV183397731
OLZM01001155
[OLZM] human gut metagenome; feces
740
814
+
Asp
GTC
[ENA]
¡û
>WENV183397782
OLZM01004088
[OLZM] human gut metagenome; feces
744
828
+
Leu
GAG
[ENA]
¡û
>WENV183397799
OLZM01007025
[OLZM] human gut metagenome; feces
747
664
-
Leu
GAG
[ENA]
¡û
>WENV183397767
OLZM01003022
[OLZM] human gut metagenome; feces
753
681
-
Val
GAC
[ENA]
¡û
>WENV183397778
OLZM01003721
[OLZM] human gut metagenome; feces
759
831
+
Thr
GGT
[ENA]
¡û
>WENV183397755
OLZM01002330
[OLZM] human gut metagenome; feces
784
712
-
Ala
TGC
[ENA]
¡û
>WENV183397747
OLZM01002069
[OLZM] human gut metagenome; feces
785
712
-
Ala
GGC
[ENA]
¡û
>WENV183397771
OLZM01003340
[OLZM] human gut metagenome; feces
794
720
-
Pro
CGG
[ENA]
¡û
>WENV183397739
OLZM01001651
[OLZM] human gut metagenome; feces
827
752
-
Ala
GGC
[ENA]
¡û
>WENV183397795
OLZM01006113
[OLZM] human gut metagenome; feces
833
761
-
Arg
CCT
[ENA]
¡û
>WENV183397783
OLZM01004088
[OLZM] human gut metagenome; feces
838
911
+
Gly
GCC
[ENA]
¡û
>WENV183397750
OLZM01002229
[OLZM] human gut metagenome; feces
878
796
-
Leu
TAG
[ENA]
¡û
>WENV183397789
OLZM01004882
[OLZM] human gut metagenome; feces
899
973
+
Met
CAT
[ENA]
¡û
>WENV183397763
OLZM01002609
[OLZM] human gut metagenome; feces
924
1013
+
Ser
GCT
[ENA]
¡û
>WENV183397784
OLZM01004088
[OLZM] human gut metagenome; feces
926
1011
+
Leu
TAA
[ENA]
¡û
>WENV183397787
OLZM01004681
[OLZM] human gut metagenome; feces
934
1013
+
Leu
CAA
[ENA]
¡û
>WENV183397786
OLZM01004477
[OLZM] human gut metagenome; feces
963
1039
+
Arg
TCT
[ENA]
¡û
>WENV183397681
OLZM01000111
[OLZM] human gut metagenome; feces
1001
1076
+
Asp
GTC
[ENA]
¡û
>WENV183397780
OLZM01004022
[OLZM] human gut metagenome; feces
1003
919
-
Leu
GAG
[ENA]
¡û
>WENV183397770
OLZM01003115
[OLZM] human gut metagenome; feces
1025
1099
+
Ile
TAT
[ENA]
¡û
>WENV183397682
OLZM01000111
[OLZM] human gut metagenome; feces
1082
1157
+
Val
TAC
[ENA]
¡û
>WENV183397766
OLZM01002985
[OLZM] human gut metagenome; feces
1163
1239
+
Arg
TCT
[ENA]
¡û
>WENV183397683
OLZM01000111
[OLZM] human gut metagenome; feces
1163
1239
+
Asp
GTC
[ENA]
¡û
>WENV183397732
OLZM01001158
[OLZM] human gut metagenome; feces
1172
1245
+
Arg
CCT
[ENA]
¡û
>WENV183397764
OLZM01002651
[OLZM] human gut metagenome; feces
1213
1288
+
Trp
CCA
[ENA]
¡û
>WENV183397684
OLZM01000111
[OLZM] human gut metagenome; feces
1246
1321
+
Phe
GAA
[ENA]
¡û
>WENV183397712
OLZM01000386
[OLZM] human gut metagenome; feces
1261
1345
+
Leu
CAA
[ENA]
¡û
>WENV183397757
OLZM01002379
[OLZM] human gut metagenome; feces
1293
1212
-
Leu
TAG
[ENA]
¡û
>WENV183397735
OLZM01001342
[OLZM] human gut metagenome; feces
1296
1222
-
His
GTG
[ENA]
¡û
>WENV183397716
OLZM01000631
[OLZM] human gut metagenome; feces
1320
1245
-
Lys
CTT
[ENA]
¡û
>WENV183397685
OLZM01000111
[OLZM] human gut metagenome; feces
1329
1404
+
Gly
GCC
[ENA]
¡û
>WENV183397736
OLZM01001378
[OLZM] human gut metagenome; feces
1369
1443
+
His
GTG
[ENA]
¡û
>WENV183397715
OLZM01000631
[OLZM] human gut metagenome; feces
1398
1324
-
Glu
CTC
[ENA]
¡û
>WENV183397711
OLZM01000375
[OLZM] human gut metagenome; feces
1427
1502
+
Thr
CGT
[ENA]
¡û
>WENV183397742
OLZM01001948
[OLZM] human gut metagenome; feces
1441
1366
-
Pro
TGG
[ENA]
¡û
>WENV183397733
OLZM01001226
[OLZM] human gut metagenome; feces
1446
1522
+
Met
CAT
[ENA]
¡û
>WENV183397718
OLZM01000660
[OLZM] human gut metagenome; feces
1511
1602
+
Ser
CGA
[ENA]
¡û
>WENV183397728
OLZM01000976
[OLZM] human gut metagenome; feces
1530
1453
-
Arg
CCT
[ENA]
¡û
>WENV183397702
OLZM01000367
[OLZM] human gut metagenome; feces
1540
1467
-
Gly
CCC
[ENA]
¡û
>WENV183397734
OLZM01001226
[OLZM] human gut metagenome; feces
1614
1685
+
Glu
TTC
[ENA]
¡û
>WENV183397724
OLZM01000878
[OLZM] human gut metagenome; feces
1656
1729
+
Gln
CTG
[ENA]
¡û
>WENV183397690
OLZM01000206
[OLZM] human gut metagenome; feces
1761
1686
-
Thr
GGT
[ENA]
¡û
>WENV183397729
OLZM01000977
[OLZM] human gut metagenome; feces
1825
1750
-
Pro
TGG
[ENA]
¡û
>WENV183397689
OLZM01000206
[OLZM] human gut metagenome; feces
1841
1765
-
Asp
GTC
[ENA]
¡û
>WENV183397730
OLZM01001041
[OLZM] human gut metagenome; feces
1950
2026
+
Pro
GGG
[ENA]
¡û
>WENV183397710
OLZM01000372
[OLZM] human gut metagenome; feces
2069
1996
-
Lys
TTT
[ENA]
¡û
>WENV183397688
OLZM01000206
[OLZM] human gut metagenome; feces
2078
2003
-
Trp
CCA
[ENA]
¡û
>WENV183397694
OLZM01000264
[OLZM] human gut metagenome; feces
2088
2012
-
Asn
GTT
[ENA]
¡û
>WENV183397680
OLZM01000048
[OLZM] human gut metagenome; feces
2313
2228
-
Leu
TAA
[ENA]
¡û
>WENV183397723
OLZM01000797
[OLZM] human gut metagenome; feces
2327
2252
-
Gly
CCC
[ENA]
¡û
>WENV183397722
OLZM01000712
[OLZM] human gut metagenome; feces
2341
2250
-
Ser
GGA
[ENA]
¡û
>WENV183397696
OLZM01000348
[OLZM] human gut metagenome; feces
2477
2401
-
fMet
CAT
[ENA]
¡û
>WENV183397717
OLZM01000642
[OLZM] human gut metagenome; feces
2580
2654
+
Thr
TGT
[ENA]
¡û
>WENV183397679
OLZM01000035
[OLZM] human gut metagenome; feces
2584
2499
-
Tyr
GTA
[ENA]
¡û
>WENV183397714
OLZM01000517
[OLZM] human gut metagenome; feces
2748
2674
-
Ala
TGC
[ENA]
¡û
>WENV183397713
OLZM01000517
[OLZM] human gut metagenome; feces
2839
2765
-
Ile
GAT
[ENA]
¡û
>WENV183397695
OLZM01000286
[OLZM] human gut metagenome; feces
2975
2902
-
Trp
CCA
[ENA]
¡û
>WENV183397691
OLZM01000225
[OLZM] human gut metagenome; feces
3785
3861
+
Met
CAT
[ENA]
¡û
>WENV183397687
OLZM01000191
[OLZM] human gut metagenome; feces
3799
3884
+
Leu
TAG
[ENA]
¡û
>WENV183397692
OLZM01000225
[OLZM] human gut metagenome; feces
3867
3941
+
Glu
TTC
[ENA]
¡û
>WENV183397693
OLZM01000225
[OLZM] human gut metagenome; feces
3951
4038
+
Leu
TAA
[ENA]
¡û
>WENV183397686
OLZM01000114
[OLZM] human gut metagenome; feces
4964
5039
+
Arg
CCG
[ENA]
¡û
>WENV183397676
OLZM01000008
[OLZM] human gut metagenome; feces
6117
6193
+
Arg
ACG
[ENA]
¡û
>WENV183397678
OLZM01000010
[OLZM] human gut metagenome; feces
6147
6072
-
Gly
GCC
[ENA]
¡û
>WENV183397677
OLZM01000009
[OLZM] human gut metagenome; feces
6646
6570
-
Trp
CCA
[ENA]
¡û
>WENV183397675
OLZM01000006
[OLZM] human gut metagenome; feces
12048
11964
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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