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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OOCO] human gut metagenome; human gut
HIT:
136 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183581520
OOCO01002998
[OOCO] human gut metagenome; human gut
4
80
+
His
GTG
[ENA]
¡û
>WENV183581518
OOCO01001791
[OOCO] human gut metagenome; human gut
48
122
+
Asp
GTC
[ENA]
¡û
>WENV183581528
OOCO01004414
[OOCO] human gut metagenome; human gut
68
144
+
Met
CAT
[ENA]
¡û
>WENV183581485
OOCO01000375
[OOCO] human gut metagenome; human gut
76
1
-
Phe
GAA
[ENA]
¡û
>WENV183581537
OOCO01006508
[OOCO] human gut metagenome; human gut
103
21
-
Leu
CAG
[ENA]
¡û
>WENV183581464
OOCO01000116
[OOCO] human gut metagenome; human gut
103
177
+
Gln
CTG
[ENA]
¡û
>WENV183581425
OOCO01000015
[OOCO] human gut metagenome; human gut
103
179
+
Asp
GTC
[ENA]
¡û
>WENV183581527
OOCO01003792
[OOCO] human gut metagenome; human gut
107
31
-
His
GTG
[ENA]
¡û
>WENV183581501
OOCO01000677
[OOCO] human gut metagenome; human gut
108
194
+
Leu
CAA
[ENA]
¡û
>WENV183581532
OOCO01005555
[OOCO] human gut metagenome; human gut
111
39
-
Val
TAC
[ENA]
¡û
>WENV183581476
OOCO01000228
[OOCO] human gut metagenome; human gut
164
90
-
Gln
TTG
[ENA]
¡û
>WENV183581511
OOCO01001234
[OOCO] human gut metagenome; human gut
179
254
+
Ala
TGC
[ENA]
¡û
>WENV183581516
OOCO01001558
[OOCO] human gut metagenome; human gut
180
106
-
Asp
GTC
[ENA]
¡û
>WENV183581535
OOCO01006227
[OOCO] human gut metagenome; human gut
184
258
+
Ile
GAT
[ENA]
¡û
>WENV183581426
OOCO01000015
[OOCO] human gut metagenome; human gut
188
263
+
Trp
CCA
[ENA]
¡û
>WENV183581526
OOCO01003792
[OOCO] human gut metagenome; human gut
229
153
-
Arg
TCT
[ENA]
¡û
>WENV183581491
OOCO01000452
[OOCO] human gut metagenome; human gut
248
324
+
Arg
ACG
[ENA]
¡û
>WENV183581512
OOCO01001234
[OOCO] human gut metagenome; human gut
258
334
+
Ile
GAT
[ENA]
¡û
>WENV183581533
OOCO01006120
[OOCO] human gut metagenome; human gut
265
178
-
Leu
CAG
[ENA]
¡û
>WENV183581475
OOCO01000228
[OOCO] human gut metagenome; human gut
272
188
-
Leu
TAG
[ENA]
¡û
>WENV183581536
OOCO01006227
[OOCO] human gut metagenome; human gut
275
349
+
Ala
TGC
[ENA]
¡û
>WENV183581525
OOCO01003792
[OOCO] human gut metagenome; human gut
309
236
-
Gly
TCC
[ENA]
¡û
>WENV183581523
OOCO01003441
[OOCO] human gut metagenome; human gut
321
245
-
Arg
ACG
[ENA]
¡û
>WENV183581474
OOCO01000228
[OOCO] human gut metagenome; human gut
358
282
-
Met
CAT
[ENA]
¡û
>WENV183581499
OOCO01000528
[OOCO] human gut metagenome; human gut
380
305
-
Thr
GGT
[ENA]
¡û
>WENV183581492
OOCO01000452
[OOCO] human gut metagenome; human gut
387
463
+
Arg
ACG
[ENA]
¡û
>WENV183581498
OOCO01000528
[OOCO] human gut metagenome; human gut
461
387
-
Gly
TCC
[ENA]
¡û
>WENV183581534
OOCO01006152
[OOCO] human gut metagenome; human gut
477
401
-
Val
CAC
[ENA]
¡û
>WENV183581531
OOCO01005204
[OOCO] human gut metagenome; human gut
478
403
-
Gly
GCC
[ENA]
¡û
>WENV183581530
OOCO01005204
[OOCO] human gut metagenome; human gut
559
486
-
Phe
GAA
[ENA]
¡û
>WENV183581524
OOCO01003743
[OOCO] human gut metagenome; human gut
577
649
+
fMet
CAT
[ENA]
¡û
>WENV183581529
OOCO01004997
[OOCO] human gut metagenome; human gut
581
505
-
Asn
GTT
[ENA]
¡û
>WENV183581463
OOCO01000109
[OOCO] human gut metagenome; human gut
607
683
+
Arg
TCT
[ENA]
¡û
>WENV183581506
OOCO01000829
[OOCO] human gut metagenome; human gut
625
699
+
Asn
GTT
[ENA]
¡û
>WENV183581497
OOCO01000528
[OOCO] human gut metagenome; human gut
662
578
-
Tyr
GTA
[ENA]
¡û
>WENV183581493
OOCO01000452
[OOCO] human gut metagenome; human gut
662
738
+
Arg
ACG
[ENA]
¡û
>WENV183581513
OOCO01001288
[OOCO] human gut metagenome; human gut
746
658
-
Leu
TAA
[ENA]
¡û
>WENV183581496
OOCO01000528
[OOCO] human gut metagenome; human gut
746
671
-
Thr
TGT
[ENA]
¡û
>WENV183581522
OOCO01003142
[OOCO] human gut metagenome; human gut
748
672
-
Ile
GAT
[ENA]
¡û
>WENV183581452
OOCO01000086
[OOCO] human gut metagenome; human gut
763
837
+
Ile
GAT
[ENA]
¡û
>WENV183581514
OOCO01001336
[OOCO] human gut metagenome; human gut
775
686
-
Ser
CGA
[ENA]
¡û
>WENV183581519
OOCO01001905
[OOCO] human gut metagenome; human gut
786
714
-
Glu
CTC
[ENA]
¡û
>WENV183581507
OOCO01000829
[OOCO] human gut metagenome; human gut
796
871
+
Thr
TGT
[ENA]
¡û
>WENV183581457
OOCO01000089
[OOCO] human gut metagenome; human gut
800
715
-
Tyr
GTA
[ENA]
¡û
>WENV183581509
OOCO01000884
[OOCO] human gut metagenome; human gut
842
930
+
Ser
GGA
[ENA]
¡û
>WENV183581453
OOCO01000086
[OOCO] human gut metagenome; human gut
856
932
+
Ala
TGC
[ENA]
¡û
>WENV183581521
OOCO01003142
[OOCO] human gut metagenome; human gut
873
798
-
Ala
TGC
[ENA]
¡û
>WENV183581456
OOCO01000089
[OOCO] human gut metagenome; human gut
901
830
-
Gln
TTG
[ENA]
¡û
>WENV183581482
OOCO01000313
[OOCO] human gut metagenome; human gut
958
882
-
Asp
GTC
[ENA]
¡û
>WENV183581455
OOCO01000089
[OOCO] human gut metagenome; human gut
984
911
-
Glu
TTC
[ENA]
¡û
>WENV183581431
OOCO01000019
[OOCO] human gut metagenome; human gut
1062
1135
+
fMet
CAT
[ENA]
¡û
>WENV183581508
OOCO01000829
[OOCO] human gut metagenome; human gut
1192
1278
+
Ser
TGA
[ENA]
¡û
>WENV183581515
OOCO01001406
[OOCO] human gut metagenome; human gut
1235
1317
+
Leu
TAG
[ENA]
¡û
>WENV183581517
OOCO01001599
[OOCO] human gut metagenome; human gut
1455
1531
+
fMet
CAT
[ENA]
¡û
>WENV183581458
OOCO01000100
[OOCO] human gut metagenome; human gut
1553
1628
+
Val
TAC
[ENA]
¡û
>WENV183581505
OOCO01000782
[OOCO] human gut metagenome; human gut
1627
1555
-
Thr
CGT
[ENA]
¡û
>WENV183581459
OOCO01000100
[OOCO] human gut metagenome; human gut
1677
1752
+
Val
TAC
[ENA]
¡û
>WENV183581502
OOCO01000713
[OOCO] human gut metagenome; human gut
1817
1892
+
Ile2
CAT
[ENA]
¡û
>WENV183581510
OOCO01001211
[OOCO] human gut metagenome; human gut
1845
1916
+
Cys
GCA
[ENA]
¡û
>WENV183581471
OOCO01000200
[OOCO] human gut metagenome; human gut
2233
2320
+
Ser
TGA
[ENA]
¡û
>WENV183581490
OOCO01000446
[OOCO] human gut metagenome; human gut
2505
2429
-
Ala
GGC
[ENA]
¡û
>WENV183581489
OOCO01000414
[OOCO] human gut metagenome; human gut
2555
2480
-
Ala
GGC
[ENA]
¡û
>WENV183581500
OOCO01000620
[OOCO] human gut metagenome; human gut
2605
2534
-
Trp
CCA
[ENA]
¡û
>WENV183581488
OOCO01000414
[OOCO] human gut metagenome; human gut
2670
2595
-
Ala
GGC
[ENA]
¡û
>WENV183581454
OOCO01000087
[OOCO] human gut metagenome; human gut
2719
2646
-
Lys
TTT
[ENA]
¡û
>WENV183581504
OOCO01000739
[OOCO] human gut metagenome; human gut
2803
2728
-
Ala
TGC
[ENA]
¡û
>WENV183581503
OOCO01000739
[OOCO] human gut metagenome; human gut
2922
2846
-
Ile
GAT
[ENA]
¡û
>WENV183581407
OOCO01000003
[OOCO] human gut metagenome; human gut
3465
3391
-
Thr
TGT
[ENA]
¡û
>WENV183581494
OOCO01000484
[OOCO] human gut metagenome; human gut
3581
3654
+
Cys
GCA
[ENA]
¡û
>WENV183581495
OOCO01000484
[OOCO] human gut metagenome; human gut
3667
3753
+
Leu
TAA
[ENA]
¡û
>WENV183581465
OOCO01000122
[OOCO] human gut metagenome; human gut
3778
3692
-
Leu
GAG
[ENA]
¡û
>WENV183581479
OOCO01000252
[OOCO] human gut metagenome; human gut
5073
4999
-
Met
CAT
[ENA]
¡û
>WENV183581486
OOCO01000397
[OOCO] human gut metagenome; human gut
5272
5347
+
fMet
CAT
[ENA]
¡û
>WENV183581487
OOCO01000414
[OOCO] human gut metagenome; human gut
5370
5445
+
Val
TAC
[ENA]
¡û
>WENV183581484
OOCO01000343
[OOCO] human gut metagenome; human gut
5448
5373
-
Asn
GTT
[ENA]
¡û
>WENV183581481
OOCO01000282
[OOCO] human gut metagenome; human gut
5757
5683
-
Arg
CCT
[ENA]
¡û
>WENV183581480
OOCO01000273
[OOCO] human gut metagenome; human gut
6471
6544
+
Gly
CCC
[ENA]
¡û
>WENV183581483
OOCO01000328
[OOCO] human gut metagenome; human gut
7391
7307
-
Tyr
GTA
[ENA]
¡û
>WENV183581402
OOCO01000002
[OOCO] human gut metagenome; human gut
7394
7488
+
SeC
TCA
[ENA]
¡û
>WENV183581449
OOCO01000075
[OOCO] human gut metagenome; human gut
8266
8339
+
Lys
CTT
[ENA]
¡û
>WENV183581469
OOCO01000143
[OOCO] human gut metagenome; human gut
8280
8196
-
Leu
CAA
[ENA]
¡û
>WENV183581473
OOCO01000222
[OOCO] human gut metagenome; human gut
8669
8593
-
Val
GAC
[ENA]
¡û
>WENV183581478
OOCO01000247
[OOCO] human gut metagenome; human gut
8711
8798
+
Ser
GGA
[ENA]
¡û
>WENV183581472
OOCO01000222
[OOCO] human gut metagenome; human gut
8750
8674
-
Val
GAC
[ENA]
¡û
>WENV183581406
OOCO01000003
[OOCO] human gut metagenome; human gut
9059
8974
-
Ser
TGA
[ENA]
¡û
>WENV183581460
OOCO01000107
[OOCO] human gut metagenome; human gut
9208
9295
+
Ser
GCT
[ENA]
¡û
>WENV183581461
OOCO01000107
[OOCO] human gut metagenome; human gut
9322
9394
+
Glu
CTC
[ENA]
¡û
>WENV183581462
OOCO01000107
[OOCO] human gut metagenome; human gut
9463
9535
+
Glu
CTC
[ENA]
¡û
>WENV183581477
OOCO01000242
[OOCO] human gut metagenome; human gut
10297
10222
-
Gly
GCC
[ENA]
¡û
>WENV183581441
OOCO01000038
[OOCO] human gut metagenome; human gut
12085
12012
-
Trp
CCA
[ENA]
¡û
>WENV183581432
OOCO01000021
[OOCO] human gut metagenome; human gut
12636
12710
+
Arg
CCT
[ENA]
¡û
>WENV183581405
OOCO01000003
[OOCO] human gut metagenome; human gut
12696
12623
-
Phe
GAA
[ENA]
¡û
>WENV183581419
OOCO01000008
[OOCO] human gut metagenome; human gut
12966
12895
-
Gly
CCC
[ENA]
¡û
>WENV183581418
OOCO01000008
[OOCO] human gut metagenome; human gut
13071
12998
-
Thr
CGT
[ENA]
¡û
>WENV183581448
OOCO01000069
[OOCO] human gut metagenome; human gut
13136
13212
+
Pro
CGG
[ENA]
¡û
>WENV183581440
OOCO01000038
[OOCO] human gut metagenome; human gut
13485
13413
-
Thr
GGT
[ENA]
¡û
>WENV183581439
OOCO01000038
[OOCO] human gut metagenome; human gut
13667
13585
-
Tyr
GTA
[ENA]
¡û
>WENV183581438
OOCO01000038
[OOCO] human gut metagenome; human gut
13758
13684
-
Thr
TGT
[ENA]
¡û
>WENV183581470
OOCO01000162
[OOCO] human gut metagenome; human gut
16447
16523
+
Pro
GGG
[ENA]
¡û
>WENV183581447
OOCO01000056
[OOCO] human gut metagenome; human gut
16851
16933
+
Tyr
GTA
[ENA]
¡û
>WENV183581466
OOCO01000130
[OOCO] human gut metagenome; human gut
17541
17627
+
Leu
CAG
[ENA]
¡û
>WENV183581467
OOCO01000130
[OOCO] human gut metagenome; human gut
17656
17742
+
Leu
CAG
[ENA]
¡û
>WENV183581468
OOCO01000130
[OOCO] human gut metagenome; human gut
17777
17863
+
Leu
CAG
[ENA]
¡û
>WENV183581442
OOCO01000040
[OOCO] human gut metagenome; human gut
22013
22097
+
Leu
TAG
[ENA]
¡û
>WENV183581420
OOCO01000009
[OOCO] human gut metagenome; human gut
23752
23836
+
Leu
CAA
[ENA]
¡û
>WENV183581451
OOCO01000081
[OOCO] human gut metagenome; human gut
24429
24504
+
Ile2
CAT
[ENA]
¡û
>WENV183581450
OOCO01000078
[OOCO] human gut metagenome; human gut
25949
25874
-
Thr
CGT
[ENA]
¡û
>WENV183581443
OOCO01000048
[OOCO] human gut metagenome; human gut
26687
26599
-
Ser
GGA
[ENA]
¡û
>WENV183581446
OOCO01000049
[OOCO] human gut metagenome; human gut
27780
27696
-
Leu
GAG
[ENA]
¡û
>WENV183581445
OOCO01000049
[OOCO] human gut metagenome; human gut
27886
27804
-
Leu
CAG
[ENA]
¡û
>WENV183581444
OOCO01000049
[OOCO] human gut metagenome; human gut
28107
28023
-
Leu
GAG
[ENA]
¡û
>WENV183581435
OOCO01000025
[OOCO] human gut metagenome; human gut
30675
30602
-
Phe
GAA
[ENA]
¡û
>WENV183581434
OOCO01000025
[OOCO] human gut metagenome; human gut
30831
30906
+
Pro
CGG
[ENA]
¡û
>WENV183581408
OOCO01000004
[OOCO] human gut metagenome; human gut
35344
35415
+
Gln
TTG
[ENA]
¡û
>WENV183581424
OOCO01000010
[OOCO] human gut metagenome; human gut
35527
35456
-
Cys
GCA
[ENA]
¡û
>WENV183581427
OOCO01000015
[OOCO] human gut metagenome; human gut
35606
35682
+
Arg
CCG
[ENA]
¡û
>WENV183581428
OOCO01000015
[OOCO] human gut metagenome; human gut
35741
35816
+
His
GTG
[ENA]
¡û
>WENV183581429
OOCO01000015
[OOCO] human gut metagenome; human gut
35837
35923
+
Leu
CAG
[ENA]
¡û
>WENV183581430
OOCO01000015
[OOCO] human gut metagenome; human gut
35966
36042
+
Pro
TGG
[ENA]
¡û
>WENV183581437
OOCO01000028
[OOCO] human gut metagenome; human gut
36243
36169
-
Pro
TGG
[ENA]
¡û
>WENV183581436
OOCO01000028
[OOCO] human gut metagenome; human gut
36357
36283
-
Pro
TGG
[ENA]
¡û
>WENV183581412
OOCO01000005
[OOCO] human gut metagenome; human gut
37446
37375
-
Gln
CTG
[ENA]
¡û
>WENV183581411
OOCO01000005
[OOCO] human gut metagenome; human gut
37542
37471
-
Gln
CTG
[ENA]
¡û
>WENV183581421
OOCO01000009
[OOCO] human gut metagenome; human gut
38112
38186
+
Asn
GTT
[ENA]
¡û
>WENV183581422
OOCO01000009
[OOCO] human gut metagenome; human gut
38236
38310
+
Asn
GTT
[ENA]
¡û
>WENV183581433
OOCO01000022
[OOCO] human gut metagenome; human gut
42547
42622
+
Arg
TCT
[ENA]
¡û
>WENV183581417
OOCO01000008
[OOCO] human gut metagenome; human gut
43823
43750
-
Lys
CTT
[ENA]
¡û
>WENV183581416
OOCO01000008
[OOCO] human gut metagenome; human gut
44108
44035
-
Lys
CTT
[ENA]
¡û
>WENV183581410
OOCO01000004
[OOCO] human gut metagenome; human gut
47773
47701
-
Arg
CCT
[ENA]
¡û
>WENV183581413
OOCO01000008
[OOCO] human gut metagenome; human gut
50981
51055
+
Asp
GTC
[ENA]
¡û
>WENV183581414
OOCO01000008
[OOCO] human gut metagenome; human gut
51090
51164
+
Asp
GTC
[ENA]
¡û
>WENV183581415
OOCO01000008
[OOCO] human gut metagenome; human gut
51199
51273
+
Asp
GTC
[ENA]
¡û
>WENV183581423
OOCO01000009
[OOCO] human gut metagenome; human gut
57701
57775
+
Ile2
CAT
[ENA]
¡û
>WENV183581409
OOCO01000004
[OOCO] human gut metagenome; human gut
63430
63343
-
Leu
TAA
[ENA]
¡û
>WENV183581404
OOCO01000003
[OOCO] human gut metagenome; human gut
82429
82354
-
His
GTG
[ENA]
¡û
>WENV183581403
OOCO01000003
[OOCO] human gut metagenome; human gut
82539
82464
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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