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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
Bacillota
Bacteria
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W121029087
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
2
78
+
Met
CAT
[ENA]
¡û
>W121029088
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
82
157
+
Asp
GTC
[ENA]
¡û
>W121029073
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
95
3
-
Ser
TGA
[ENA]
¡û
>W121029089
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
167
242
+
Phe
GAA
[ENA]
¡û
>W121029112
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
168
98
-
Gly
TCC
[ENA]
¡û
>W121029072
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
186
113
-
Ala
TGC
[ENA]
¡û
>W121029081
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
195
120
-
Ala
TGC
[ENA]
¡û
>W121029111
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
246
170
-
Pro
TGG
[ENA]
¡û
>W121029090
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
257
332
+
Thr
TGT
[ENA]
¡û
>W121029071
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
275
202
-
Pro
TGG
[ENA]
¡û
>W121029080
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
282
206
-
Ile
GAT
[ENA]
¡û
>W121029110
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
326
250
-
Arg
ACG
[ENA]
¡û
>W121029091
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
343
426
+
Tyr
GTA
[ENA]
¡û
>W121029070
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
359
285
-
Arg
ACG
[ENA]
¡û
>W121029092
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
435
508
+
Trp
CCA
[ENA]
¡û
>W121029069
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
451
363
-
Leu
TAA
[ENA]
¡û
>W121029109
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
505
420
-
Leu
GAG
[ENA]
¡û
>W121029093
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
528
603
+
His
GTG
[ENA]
¡û
>W121029068
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
542
468
-
Gly
GCC
[ENA]
¡û
>W121029108
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
594
521
-
Lys
TTT
[ENA]
¡û
>W121029067
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
652
571
-
Leu
TAG
[ENA]
¡û
>W121029094
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
667
741
+
Gln
TTG
[ENA]
¡û
>W121029107
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
674
600
-
Gln
TTG
[ENA]
¡û
>W121029066
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
744
669
-
Lys
TTT
[ENA]
¡û
>W121029095
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
747
821
+
Gly
GCC
[ENA]
¡û
>W121029065
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
823
749
-
Gln
TTG
[ENA]
¡û
>W121029096
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
836
906
+
Cys
GCA
[ENA]
¡û
>W121029106
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
837
762
-
Asp
GTC
[ENA]
¡û
>W121029083
AHEU01000051
Bacillota
Bacillus cereus VD048 [AHEU]
913
987
+
Asn
GTT
[ENA]
¡û
>W121029097
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
915
1000
+
Leu
CAA
[ENA]
¡û
>W121029105
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
917
841
-
Met
CAT
[ENA]
¡û
>W121029064
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
919
836
-
Tyr
GTA
[ENA]
¡û
>W121029084
AHEU01000051
Bacillota
Bacillus cereus VD048 [AHEU]
990
1081
+
Ser
GGA
[ENA]
¡û
>W121029063
AHEU01000031
Bacillota
Bacillus cereus VD048 [AHEU]
1003
928
-
Val
TAC
[ENA]
¡û
>W121029104
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
1017
942
-
Val
TAC
[ENA]
¡û
>W121029103
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
1096
1022
-
Glu
TTC
[ENA]
¡û
>W121029085
AHEU01000051
Bacillota
Bacillus cereus VD048 [AHEU]
1101
1175
+
Glu
TTC
[ENA]
¡û
>W121029086
AHEU01000051
Bacillota
Bacillus cereus VD048 [AHEU]
1181
1256
+
Val
TAC
[ENA]
¡û
>W121029102
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
1195
1105
-
Ser
GCT
[ENA]
¡û
>W121029101
AHEU01000056
Bacillota
Bacillus cereus VD048 [AHEU]
1273
1199
-
Asn
GTT
[ENA]
¡û
>W121029029
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3162
3237
+
Val
TAC
[ENA]
¡û
>W121029030
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3242
3317
+
Thr
TGT
[ENA]
¡û
>W121029031
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3328
3403
+
His
GTG
[ENA]
¡û
>W121029032
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3428
3509
+
Leu
TAG
[ENA]
¡û
>W121029033
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3538
3612
+
Gly
GCC
[ENA]
¡û
>W121029034
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3629
3717
+
Leu
TAA
[ENA]
¡û
>W121029035
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3720
3795
+
Arg
ACG
[ENA]
¡û
>W121029036
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3806
3879
+
Pro
TGG
[ENA]
¡û
>W121029037
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3894
3967
+
Ala
TGC
[ENA]
¡û
>W121029038
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
3987
4063
+
Met
CAT
[ENA]
¡û
>W121029039
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4068
4144
+
Met
CAT
[ENA]
¡û
>W121029040
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4162
4254
+
Ser
TGA
[ENA]
¡û
>W121029041
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4282
4358
+
Met
CAT
[ENA]
¡û
>W121029042
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4362
4437
+
Asp
GTC
[ENA]
¡û
>W121029043
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4453
4528
+
Phe
GAA
[ENA]
¡û
>W121029044
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4543
4618
+
Thr
TGT
[ENA]
¡û
>W121029045
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4629
4704
+
Lys
TTT
[ENA]
¡û
>W121029046
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4718
4788
+
Gly
TCC
[ENA]
¡û
>W121029047
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4795
4871
+
Ile
GAT
[ENA]
¡û
>W121029048
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4879
4953
+
Asn
GTT
[ENA]
¡û
>W121029049
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
4960
5050
+
Ser
GCT
[ENA]
¡û
>W121029050
AHEU01000001
Bacillota
Bacillus cereus VD048 [AHEU]
5056
5129
+
Glu
TTC
[ENA]
¡û
>W121029098
AHEU01000052
Bacillota
Bacillus cereus VD048 [AHEU]
5781
5854
+
Gly
TCC
[ENA]
¡û
>W121029122
AHEU01000062
Bacillota
Bacillus cereus VD048 [AHEU]
7431
7339
-
Ser
TGA
[ENA]
¡û
>W121029100
AHEU01000055
Bacillota
Bacillus cereus VD048 [AHEU]
16784
16709
-
Asp
GTC
[ENA]
¡û
>W121029099
AHEU01000055
Bacillota
Bacillus cereus VD048 [AHEU]
16864
16788
-
Met
CAT
[ENA]
¡û
>W121029075
AHEU01000032
Bacillota
Bacillus cereus VD048 [AHEU]
22046
21975
-
Glu
TTC
[ENA]
¡û
>W121029074
AHEU01000032
Bacillota
Bacillus cereus VD048 [AHEU]
22134
22059
-
Met
CAT
[ENA]
¡û
>W121029076
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
31534
31609
+
Lys
TTT
[ENA]
¡û
>W121029077
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
31622
31695
+
Glu
TTC
[ENA]
¡û
>W121029078
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
31716
31791
+
Asp
GTC
[ENA]
¡û
>W121029079
AHEU01000033
Bacillota
Bacillus cereus VD048 [AHEU]
31833
31906
+
Phe
GAA
[ENA]
¡û
>W121029121
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71238
71166
-
Ala
TGC
[ENA]
¡û
>W121029120
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71320
71249
-
Gly
GCC
[ENA]
¡û
>W121029119
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71401
71326
-
Lys
TTT
[ENA]
¡û
>W121029118
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71481
71407
-
Gln
TTG
[ENA]
¡û
>W121029117
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71630
71547
-
Tyr
GTA
[ENA]
¡û
>W121029116
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71722
71647
-
Val
TAC
[ENA]
¡û
>W121029115
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71802
71728
-
Glu
TTC
[ENA]
¡û
>W121029114
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71899
71827
-
Thr
GGT
[ENA]
¡û
>W121029113
AHEU01000057
Bacillota
Bacillus cereus VD048 [AHEU]
71978
71904
-
Asn
GTT
[ENA]
¡û
>W121029054
AHEU01000023
Bacillota
Bacillus cereus VD048 [AHEU]
110699
110771
+
Val
GAC
[ENA]
¡û
>W121029053
AHEU01000004
Bacillota
Bacillus cereus VD048 [AHEU]
138058
138133
+
Met
CAT
[ENA]
¡û
>W121029062
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
142999
142926
-
Glu
TTC
[ENA]
¡û
>W121029061
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143074
143000
-
Asn
GTT
[ENA]
¡û
>W121029060
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143158
143082
-
Ile
GAT
[ENA]
¡û
>W121029059
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143242
143170
-
Trp
CCA
[ENA]
¡û
>W121029058
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143320
143245
-
Thr
TGT
[ENA]
¡û
>W121029057
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143415
143340
-
Phe
GAA
[ENA]
¡û
>W121029056
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143500
143425
-
Asp
GTC
[ENA]
¡û
>W121029055
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143579
143503
-
Met
CAT
[ENA]
¡û
>W123000748
AHEU01000030
Bacillota
Bacillus cereus VD048 [AHEU]
143696
143604
-
Ser
TGA
[ENA]
¡û
>W121029082
AHEU01000036
Bacillota
Bacillus cereus VD048 [AHEU]
163200
163277
+
Arg
CCG
[ENA]
¡û
>W121029051
AHEU01000003
Bacillota
Bacillus cereus VD048 [AHEU]
188751
188824
+
Gly
TCC
[ENA]
¡û
>W121029052
AHEU01000003
Bacillota
Bacillus cereus VD048 [AHEU]
188826
188902
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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