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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
Abditibacteriota
Bacteria
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C231004104
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
122427
122356
-
Val
GAC
-
¡û
>C231004041
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
122573
122645
+
Val
TAC
-
¡û
>C231004042
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
122687
122761
+
Asp
GTC
-
¡û
>C231004043
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
122840
122913
+
Phe
GAA
-
¡û
>C231004103
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
314278
314194
-
Ser
TGA
-
¡û
>C231004102
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
314366
314283
-
Tyr
GTA
-
¡û
>C231004044
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
469862
469933
+
Val
CAC
-
¡û
>C231004101
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484225
484154
-
Ser
GCT
-
¡û
>C233000065
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484348
484272
-
Trp
CCA
-
¡û
>C231004100
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484424
484352
-
Ala
CGC
-
¡û
>C231004099
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484583
484512
-
Arg
ACG
-
¡û
>C231004098
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484670
484595
-
Met
CAT
-
¡û
>C231004097
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
484747
484673
-
Ala
TGC
-
¡û
>C231004096
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
485885
485814
-
Asp
ATC
-
¡û
>C231004095
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
579676
579601
-
Arg
CCT
-
¡û
>C231004045
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
985630
985704
+
Ala
GGC
-
¡û
>C231004046
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1191320
1191393
+
Pro
GGG
-
¡û
>C231004047
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1286808
1286880
+
Gly
GCC
-
¡û
>C231004094
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1507500
1507424
-
fMet
CAT
-
¡û
>C231004093
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1847233
1847162
-
Cys
GCA
-
¡û
>C231004048
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1939633
1939707
+
Ile
TAT
-
¡û
>C231004049
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
1943007
1943079
+
Leu
TAG
-
¡û
>C231004050
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2017020
2017092
+
Met
CAT
-
¡û
>C231004051
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2492422
2492496
+
Pro
CGG
-
¡û
>C231004092
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2563737
2563664
-
Thr
CGT
-
¡û
>C231004091
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2647026
2646954
-
Lys
CTT
-
¡û
>C231004052
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2780543
2780616
+
Pro
TGG
-
¡û
>C231004053
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2780673
2780743
+
Gly
TCC
-
¡û
>C231004054
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2780785
2780856
+
Arg
TCT
-
¡û
>C231004090
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
2976428
2976355
-
Glu
TTC
-
¡û
>C232000001
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3607237
3607307
+
Gln
TTG
-
¡û
>C231004055
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3607312
3607384
+
Asn
GTT
-
¡û
>C231004056
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3607476
3607549
+
Leu
TAA
-
¡û
>C231004057
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3607554
3607627
+
Leu
TAG
-
¡û
>C231004058
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3649709
3649781
+
His
GTG
-
¡û
>C231004059
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3649807
3649881
+
His
GTG
-
¡û
>C231004089
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
3837505
3837432
-
Phe
GAA
-
¡û
>C231004060
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4143118
4143192
+
Lys
TTT
-
¡û
>C231004061
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4190091
4190164
+
Arg
ACG
-
¡û
>C231004088
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4275583
4275500
-
Leu
GAG
-
¡û
>C231004087
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4353809
4353726
-
Leu
CAA
-
¡û
>C231004062
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4973098
4973168
+
Cys
GCA
-
¡û
>C231004063
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
4973209
4973282
+
Gln
CTG
-
¡û
>C231004086
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5366412
5366339
-
Ile
GAT
-
¡û
>C231004064
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5394739
5394830
+
Ser
GCT
-
¡û
>C231004085
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5545738
5545665
-
Gln
TTG
-
¡û
>C231004084
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5590137
5590064
-
Glu
CTC
-
¡û
>C231004065
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5593906
5593978
+
Arg
CCG
-
¡û
>C231004066
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5666724
5666796
+
Ile2
CAT
-
¡û
>C231004067
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5880213
5880295
+
Leu
CAG
-
¡û
>C231004083
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5918708
5918634
-
Arg
GCG
-
¡û
>C231004082
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
5918824
5918752
-
Asp
GTC
-
¡û
>C231004068
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6631186
6631257
+
Thr
TGT
-
¡û
>C231004069
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6631298
6631381
+
Tyr
GTA
-
¡û
>C231004070
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6631386
6631457
+
Thr
GGT
-
¡û
>C231004071
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6631486
6631562
+
Trp
CCA
-
¡û
>C231004081
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6842235
6842144
-
Ser
GCT
-
¡û
>C231004080
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6865398
6865313
-
Ser
TGA
-
¡û
>C231004072
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6900105
6900190
+
Tyr
GTA
-
¡û
>C231004073
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6953210
6953301
+
Ser
CGA
-
¡û
>C231004074
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6953374
6953463
+
Ser
GGA
-
¡û
>C231004075
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
6955633
6955705
+
Ala
CGC
-
¡û
>C231004076
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
7175723
7175794
+
Gly
CCC
-
¡û
>C231004079
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
7181090
7181008
-
Leu
TAA
-
¡û
>C231004077
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
7205970
7206044
+
Asn
GTT
-
¡û
>C231004078
AP024152
Abditibacteriota
Abditibacteriota bacterium IAD-21 [AP024152]
7206559
7206487
-
Ala
TGC
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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